MGE detailed information
MGE type: Mobilizable plasmid MGE length: 66179 bp
Accession: NZ_CP122642 Location: 1..66179 Organism: Escherichia coli strain ETEC4085 Replicon: plasmid unnamed8
Accession: NZ_CP122642 Location: 1..66179 Organism: Escherichia coli strain ETEC4085 Replicon: plasmid unnamed8
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW62_RS29430 (QDW62_29430) | 1..636 | + | 636 | WP_000835769.1 | hypothetical protein | - |
| QDW62_RS29435 (QDW62_29435) | 808..1095 | + | 288 | WP_001326593.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QDW62_RS29440 (QDW62_29440) | 1098..2333 | + | 1236 | WP_000733393.1 | hypothetical protein | VF |
| QDW62_RS29445 (QDW62_29445) | 2339..2776 | + | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| QDW62_RS29450 (QDW62_29450) | 2895..3293 | + | 399 | WP_001153669.1 | hypothetical protein | - |
| QDW62_RS29455 (QDW62_29455) | 3314..3898 | + | 585 | WP_001177114.1 | Type IV secretion system protein virB1 | VF |
| QDW62_RS29460 (QDW62_29460) | 3898..4188 | + | 291 | WP_000865478.1 | hypothetical protein | - |
| QDW62_RS29465 (QDW62_29465) | 4259..4579 | + | 321 | WP_000362083.1 | VirB3 family type IV secretion system protein | - |
| QDW62_RS29470 (QDW62_29470) | 4585..6942 | + | 2358 | WP_000548951.1 | VirB4 family type IV secretion system protein | - |
| QDW62_RS29475 (QDW62_29475) | 7108..7842 | + | 735 | WP_000432283.1 | Type IV secretion system protein virB8 | VF |
| QDW62_RS29480 (QDW62_29480) | 7839..8609 | + | 771 | WP_000979242.1 | hypothetical protein | VF |
| QDW62_RS29485 (QDW62_29485) | 8599..9738 | + | 1140 | WP_000790639.1 | hypothetical protein | VF |
| QDW62_RS29490 (QDW62_29490) | 9797..10852 | + | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| QDW62_RS29495 (QDW62_29495) | 10868..12826 | + | 1959 | WP_000338972.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QDW62_RS29500 (QDW62_29500) | 12877..14520 | + | 1644 | WP_001035589.1 | Type 3 secretion system secretin | VF |
| QDW62_RS29505 (QDW62_29505) | 14571..15881 | + | 1311 | WP_282840426.1 | type 4b pilus protein PilO2 | - |
| QDW62_RS29510 (QDW62_29510) | 15865..16359 | + | 495 | WP_000912554.1 | hypothetical protein | VF |
| QDW62_RS29515 (QDW62_29515) | 16384..17922 | + | 1539 | WP_000466225.1 | hypothetical protein | VF |
| QDW62_RS29520 (QDW62_29520) | 17913..19022 | + | 1110 | WP_000974903.1 | hypothetical protein | VF |
| QDW62_RS29525 (QDW62_29525) | 19067..19624 | + | 558 | WP_000095048.1 | type 4 pilus major pilin | - |
| QDW62_RS29530 (QDW62_29530) | 19691..20173 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| QDW62_RS29535 (QDW62_29535) | 20177..20812 | + | 636 | WP_000934978.1 | hypothetical protein | VF |
| QDW62_RS29540 (QDW62_29540) | 20825..22030 | + | 1206 | WP_282840427.1 | hypothetical protein | VF |
| QDW62_RS29545 (QDW62_29545) | 23630..24754 | + | 1125 | WP_000486720.1 | site-specific integrase | - |
| QDW62_RS29550 (QDW62_29550) | 24766..25419 | + | 654 | WP_000572549.1 | hypothetical protein | - |
| QDW62_RS29555 (QDW62_29555) | 25449..25984 | + | 536 | Protein_25 | thermonuclease family protein | - |
| QDW62_RS29560 (QDW62_29560) | 26000..26404 | + | 405 | WP_001218543.1 | hypothetical protein | - |
| QDW62_RS29565 (QDW62_29565) | 26731..27060 | + | 330 | WP_001414501.1 | hypothetical protein | - |
| QDW62_RS29570 (QDW62_29570) | 27086..27673 | + | 588 | WP_000280685.1 | DUF6012 family protein | - |
| QDW62_RS29575 (QDW62_29575) | 27698..28273 | + | 576 | WP_001198964.1 | hypothetical protein | - |
| QDW62_RS29580 (QDW62_29580) | 28278..30434 | + | 2157 | WP_000765170.1 | type IA DNA topoisomerase | - |
| QDW62_RS29585 (QDW62_29585) | 30468..30890 | + | 423 | WP_282840428.1 | hypothetical protein | - |
| QDW62_RS29590 (QDW62_29590) | 30915..31235 | + | 321 | WP_000668719.1 | hypothetical protein | - |
| QDW62_RS29595 (QDW62_29595) | 31354..31560 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| QDW62_RS29600 (QDW62_29600) | 31841..32080 | + | 240 | WP_000957667.1 | hypothetical protein | - |
| QDW62_RS29605 (QDW62_29605) | 32132..32572 | + | 441 | WP_000666081.1 | hypothetical protein | - |
| QDW62_RS29610 (QDW62_29610) | 32615..36802 | - | 4188 | WP_000637167.1 | hypothetical protein | - |
| QDW62_RS29615 (QDW62_29615) | 36799..37140 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| QDW62_RS29620 (QDW62_29620) | 37470..37949 | + | 480 | WP_001058980.1 | hypothetical protein | - |
| QDW62_RS29625 (QDW62_29625) | 37955..38656 | + | 702 | WP_000280995.1 | StbB family protein | - |
| QDW62_RS29630 (QDW62_29630) | 38703..39302 | + | 600 | WP_000091422.1 | hypothetical protein | - |
| QDW62_RS29635 (QDW62_29635) | 39322..39648 | + | 327 | WP_000206697.1 | hypothetical protein | - |
| QDW62_RS29640 (QDW62_29640) | 39779..40216 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| QDW62_RS29645 (QDW62_29645) | 40241..40423 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| QDW62_RS29650 (QDW62_29650) | 40720..41139 | + | 420 | WP_000068544.1 | hypothetical protein | - |
| QDW62_RS29655 (QDW62_29655) | 41246..41512 | - | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| QDW62_RS29660 (QDW62_29660) | 41932..42210 | - | 279 | WP_000545937.1 | hypothetical protein | - |
| QDW62_RS29665 (QDW62_29665) | 42760..43011 | - | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| QDW62_RS29670 (QDW62_29670) | 43001..43261 | - | 261 | WP_000702246.1 | hypothetical protein | Toxin Detail |
| QDW62_RS29675 (QDW62_29675) | 43312..43536 | - | 225 | WP_000814384.1 | hypothetical protein | - |
| QDW62_RS29680 (QDW62_29680) | 43634..43843 | - | 210 | WP_000866037.1 | hypothetical protein | - |
| QDW62_RS29685 (QDW62_29685) | 43885..44208 | - | 324 | WP_000427402.1 | hypothetical protein | - |
| QDW62_RS29690 (QDW62_29690) | 44789..45118 | - | 330 | WP_000855118.1 | hypothetical protein | - |
| QDW62_RS29695 (QDW62_29695) | 45716..46381 | + | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| QDW62_RS29700 (QDW62_29700) | 46460..46744 | + | 285 | WP_282840423.1 | CopG family transcriptional regulator | - |
| QDW62_RS29705 (QDW62_29705) | 46815..47072 | - | 258 | Protein_55 | transposase zinc-binding domain-containing protein | - |
| QDW62_RS29710 (QDW62_29710) | 47347..47688 | - | 342 | WP_023909256.1 | 60 kDa chaperonin | VF |
| QDW62_RS29715 (QDW62_29715) | 47649..48098 | - | 450 | WP_013362817.1 | hypothetical protein | - |
| QDW62_RS29720 (QDW62_29720) | 48728..49465 | - | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| QDW62_RS29725 (QDW62_29725) | 49591..49686 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| QDW62_RS29730 (QDW62_29730) | 49821..50525 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QDW62_RS29735 (QDW62_29735) | 50591..51136 | + | 546 | Protein_61 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QDW62_RS29740 (QDW62_29740) | 51172..51587 | - | 416 | Protein_62 | IS1 family transposase IS1R | Transposase |
| QDW62_RS29745 (QDW62_29745) | 51836..52237 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QDW62_RS29750 (QDW62_29750) | 52170..52427 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QDW62_RS29755 (QDW62_29755) | 52520..52792 | - | 273 | WP_282840424.1 | CPBP family intramembrane metalloprotease | - |
| QDW62_RS29760 (QDW62_29760) | 52808..53080 | + | 273 | WP_000019163.1 | hypothetical protein | - |
| QDW62_RS29765 (QDW62_29765) | 53061..54269 | + | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| QDW62_RS29770 (QDW62_29770) | 54433..54984 | - | 552 | WP_282840425.1 | ProQ/FINO family protein | - |
| QDW62_RS29775 (QDW62_29775) | 55194..55352 | - | 159 | Protein_69 | DUF5431 family protein | - |
| QDW62_RS29780 (QDW62_29780) | 55487..55648 | - | 162 | WP_001128311.1 | hypothetical protein | - |
| QDW62_RS29785 (QDW62_29785) | 56703..57731 | - | 1029 | WP_001175211.1 | plasmid replication initiator RepA | - |
| QDW62_RS29790 (QDW62_29790) | 58863..59315 | + | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
| QDW62_RS29795 (QDW62_29795) | 59308..59502 | + | 195 | WP_001127358.1 | DUF1187 family protein | - |
| QDW62_RS29800 (QDW62_29800) | 59548..60501 | + | 954 | WP_072097371.1 | SPFH domain-containing protein | - |
| QDW62_RS29805 (QDW62_29805) | 60563..61006 | + | 444 | WP_000498521.1 | NfeD family protein | - |
| QDW62_RS29810 (QDW62_29810) | 61010..61180 | + | 171 | WP_000550721.1 | hypothetical protein | - |
| QDW62_RS29815 (QDW62_29815) | 61191..61853 | + | 663 | WP_001243159.1 | hypothetical protein | - |
| QDW62_RS29820 (QDW62_29820) | 62004..62597 | + | 594 | WP_001243171.1 | hypothetical protein | - |
| QDW62_RS29825 (QDW62_29825) | 62811..63113 | + | 303 | WP_000189499.1 | hypothetical protein | - |
| QDW62_RS29830 (QDW62_29830) | 63110..63367 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| QDW62_RS29835 (QDW62_29835) | 63371..64366 | + | 996 | WP_000276068.1 | type IV secretion system protein | - |
| QDW62_RS29840 (QDW62_29840) | 64372..65013 | + | 642 | WP_001415805.1 | hypothetical protein | VF |
| QDW62_RS29845 (QDW62_29845) | 65016..65270 | + | 255 | WP_000609210.1 | EexN family lipoprotein | - |
| QDW62_RS29850 (QDW62_29850) | 65323..66132 | - | 810 | WP_001005154.1 | DUF5710 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|