MGE detailed information
MGE type: IScluster/Tn MGE length: 31595 bp
Accession: NZ_CP122638 Location: 23099..54693 Organism: Escherichia coli strain ETEC4085 Replicon: plasmid unnamed4
Accession: NZ_CP122638 Location: 23099..54693 Organism: Escherichia coli strain ETEC4085 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW62_RS27555 (18818) | 18818..19309 | + | 492 | WP_000753462.1 | F4 (K88) fimbria minor subunit FaeF | - |
| QDW62_RS27560 (19546) | 19546..20397 | + | 852 | WP_236295087.1 | F4 (K88) fimbria major subunit/adhesin FaeG | - |
| QDW62_RS27565 (20568) | 20568..21365 | + | 798 | WP_000704731.1 | F4 (K88) fimbria minor subunit FaeH | - |
| QDW62_RS27570 (21395) | 21395..22159 | + | 765 | WP_000758129.1 | F4 (K88) fimbria minor subunit FaeI | - |
| QDW62_RS27575 (22176) | 22176..22949 | + | 774 | WP_000932014.1 | F4 (K88) fimbria accessory protein FaeJ | - |
| QDW62_RS27580 (22949) | 22949..23080 | + | 132 | WP_255403664.1 | hypothetical protein | - |
| QDW62_RS27585 (23099) | 23099..23377 | - | 279 | Protein_26 | ISKra4 family transposase ISEc51 | Transposase |
| QDW62_RS27590 (23420) | 23420..23899 | - | 480 | Protein_27 | IS3 family transposase ISEc25 | Transposase |
| QDW62_RS27595 (23983) | 23983..24561 | - | 579 | Protein_28 | group II intron maturase-specific domain-containing protein | - |
| QDW62_RS27600 (24748) | 24748..25935 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW62_RS27605 (25935) | 25935..26300 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW62_RS27610 (26389) | 26389..26930 | - | 542 | Protein_31 | IS3 family transposase IS2 | Transposase |
| QDW62_RS27615 (27006) | 27006..27158 | + | 153 | Protein_32 | transposase | - |
| QDW62_RS27620 (27316) | 27316..27417 | + | 102 | Protein_33 | restriction endonuclease subunit M | - |
| QDW62_RS27625 (27523) | 27523..29019 | + | 1497 | WP_000231224.1 | hypothetical protein | VF |
| QDW62_RS27630 (29135) | 29135..29413 | - | 279 | Protein_35 | transposase | - |
| QDW62_RS27635 (29440) | 29440..31053 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QDW62_RS27640 (31084) | 31084..31434 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QDW62_RS27645 (31431) | 31431..31856 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QDW62_RS27650 (31942) | 31942..32785 | - | 844 | Protein_39 | IS3 family transposase | - |
| QDW62_RS27655 (33173) | 33173..33388 | - | 216 | WP_000739296.1 | heat-stable enterotoxin ST-II | - |
| QDW62_RS27660 (33865) | 33865..34444 | - | 580 | Protein_41 | IS256 family transposase | - |
| QDW62_RS27665 (34470) | 34470..34769 | + | 300 | Protein_42 | IS3 family transposase | - |
| QDW62_RS27670 (34960) | 34960..36537 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| QDW62_RS27675 (36847) | 36847..37407 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| QDW62_RS27680 (37411) | 37411..40377 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QDW62_RS27685 (40410) | 40410..40759 | + | 350 | Protein_46 | integrase core domain-containing protein | - |
| QDW62_RS27690 (40851) | 40851..41822 | - | 972 | WP_001078349.1 | IS481 family transposase ISEc18 | Transposase |
| QDW62_RS27695 (42034) | 42034..42747 | - | 714 | WP_001424997.1 | hypothetical protein | - |
| QDW62_RS27700 (43136) | 43136..43340 | + | 205 | Protein_49 | IS110 family transposase | - |
| QDW62_RS27705 (43614) | 43614..44390 | + | 777 | WP_042634421.1 | Heat-labile enterotoxin A chain | VF |
| QDW62_RS27710 (44387) | 44387..44761 | + | 375 | WP_015675362.1 | heat-labile enterotoxin LT subunit B | - |
| QDW62_RS27715 (45109) | 45109..45505 | + | 397 | Protein_52 | ATP-binding protein | - |
| QDW62_RS27720 (45698) | 45698..46437 | + | 740 | Protein_53 | IS3 family transposase IS1203 | Transposase |
| QDW62_RS27725 (46739) | 46739..47104 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW62_RS27730 (47104) | 47104..48291 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW62_RS27735 (48568) | 48568..48933 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW62_RS27740 (48933) | 48933..50120 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW62_RS27745 (50389) | 50389..50754 | - | 366 | Protein_58 | transposase DNA-binding-containing protein | - |
| QDW62_RS27750 (50988) | 50988..51950 | - | 963 | WP_000756327.1 | ParB family protein | - |
| QDW62_RS27755 (51947) | 51947..53152 | - | 1206 | WP_000817634.1 | Plasmid partition protein A | VF |
| QDW62_RS27760 (53526) | 53526..53738 | + | 213 | WP_000402944.1 | hypothetical protein | - |
| QDW62_RS27765 (53911) | 53911..54162 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QDW62_RS27770 (54159) | 54159..54446 | + | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDW62_RS27775 (54448) | 54448..54693 | + | 246 | Protein_64 | IS3 family transposase ISKpn37 | Transposase |
| QDW62_RS27780 (55373) | 55373..56350 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QDW62_RS27785 (56635) | 56635..57375 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| QDW62_RS27790 (57738) | 57738..58032 | - | 295 | Protein_67 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDW62_RS27795 (58019) | 58019..58269 | - | 251 | Protein_68 | type II toxin-antitoxin system ParD family antitoxin | - |
| QDW62_RS27800 (58792) | 58792..58901 | - | 110 | Protein_69 | IS5/IS1182 family transposase | - |
| QDW62_RS27805 (59352) | 59352..59594 | + | 243 | WP_050562259.1 | toxin-activating lysine-acyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|