MGE detailed information
MGE type: Prophage MGE length: 53473 bp
Accession: NZ_CP122634 Location: 4153747..4207219 Organism: Escherichia coli strain ETEC4085 Replicon: chromosome
Accession: NZ_CP122634 Location: 4153747..4207219 Organism: Escherichia coli strain ETEC4085 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW62_RS20860 (4149581) | 4149581..4151779 | + | 2199 | WP_000667036.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| QDW62_RS20865 (4151789) | 4151789..4152745 | + | 957 | WP_000121346.1 | molybdenum cofactor insertion chaperone PaoD | - |
| QDW62_RS20870 (4152796) | 4152796..4153134 | + | 339 | Protein_4084 | LysR substrate-binding domain-containing protein | - |
| QDW62_RS20875 (4153747) | 4153747..4156557 | + | 2811 | WP_000609167.1 | SIR2 family protein | - |
| QDW62_RS20880 (4156778) | 4156778..4157332 | - | 555 | WP_000905041.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| QDW62_RS20885 (4157362) | 4157362..4157880 | + | 519 | WP_113906238.1 | tail fiber protein | - |
| QDW62_RS20890 (4157880) | 4157880..4158482 | + | 603 | WP_000368085.1 | tail fiber assembly protein | - |
| QDW62_RS20895 (4158454) | 4158454..4158897 | - | 444 | WP_113906236.1 | tail fiber assembly protein | - |
| QDW62_RS20900 (4158918) | 4158918..4159580 | - | 663 | WP_113906233.1 | hypothetical protein | - |
| QDW62_RS20905 (4159584) | 4159584..4160168 | - | 585 | WP_000383567.1 | YmfQ family protein | - |
| QDW62_RS20910 (4160159) | 4160159..4161217 | - | 1059 | WP_000785329.1 | baseplate J/gp47 family protein | - |
| QDW62_RS20915 (4161204) | 4161204..4161629 | - | 426 | WP_000424728.1 | phage GP46 family protein | - |
| QDW62_RS20920 (4161629) | 4161629..4162177 | - | 549 | WP_000643723.1 | phage baseplate assembly protein V | - |
| QDW62_RS20925 (4162177) | 4162177..4163256 | - | 1080 | WP_000999520.1 | baseplate protein | - |
| QDW62_RS20930 (4163253) | 4163253..4164581 | - | 1329 | WP_000219904.1 | DNA circularization N-terminal domain-containing protein | - |
| QDW62_RS20935 (4164737) | 4164737..4165138 | + | 402 | WP_000583556.1 | hypothetical protein | - |
| QDW62_RS20940 (4165171) | 4165171..4167003 | - | 1833 | WP_000807192.1 | phage tail tape measure protein | - |
| QDW62_RS20945 (4167145) | 4167145..4167414 | - | 270 | WP_000661047.1 | phage tail assembly protein | - |
| QDW62_RS20950 (4167414) | 4167414..4167770 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| QDW62_RS20955 (4167770) | 4167770..4169266 | - | 1497 | WP_000155701.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| QDW62_RS20960 (4169250) | 4169250..4169420 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| QDW62_RS20965 (4169429) | 4169429..4169989 | - | 561 | WP_000779292.1 | hypothetical protein | - |
| QDW62_RS20970 (4169986) | 4169986..4170492 | - | 507 | WP_000224834.1 | hypothetical protein | - |
| QDW62_RS20975 (4170467) | 4170467..4170877 | - | 411 | WP_000702389.1 | phage head closure protein | - |
| QDW62_RS20980 (4170874) | 4170874..4171197 | - | 324 | WP_000927715.1 | head-tail connector protein | - |
| QDW62_RS20985 (4171200) | 4171200..4171400 | - | 201 | WP_000601363.1 | hypothetical protein | - |
| QDW62_RS20990 (4171450) | 4171450..4172655 | - | 1206 | WP_000257507.1 | phage major capsid protein | - |
| QDW62_RS20995 (4172670) | 4172670..4173320 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| QDW62_RS21000 (4173298) | 4173298..4174539 | - | 1242 | WP_000466255.1 | phage portal protein | - |
| QDW62_RS21005 (4174539) | 4174539..4174721 | - | 183 | WP_000605605.1 | protein YmfR | - |
| QDW62_RS21010 (4174733) | 4174733..4176466 | - | 1734 | WP_000088179.1 | terminase large subunit | - |
| QDW62_RS21015 (4176463) | 4176463..4176957 | - | 495 | WP_000929175.1 | phage terminase small subunit P27 family | - |
| QDW62_RS21020 (4177083) | 4177083..4177433 | - | 351 | WP_001135197.1 | HNH endonuclease | - |
| QDW62_RS21025 (4177584) | 4177584..4177919 | + | 336 | WP_001089762.1 | hypothetical protein | - |
| QDW62_RS21030 (4178020) | 4178020..4178589 | + | 570 | WP_000613840.1 | hypothetical protein | - |
| QDW62_RS21035 (4178611) | 4178611..4178868 | - | 258 | WP_071533016.1 | peptidase | - |
| QDW62_RS21040 (4178765) | 4178765..4179145 | - | 381 | WP_001434542.1 | DUF2570 domain-containing protein | - |
| QDW62_RS21045 (4179129) | 4179129..4179605 | - | 477 | WP_001157005.1 | glycoside hydrolase family protein | - |
| QDW62_RS21050 (4179609) | 4179609..4179935 | - | 327 | WP_001120497.1 | phage holin, lambda family | - |
| QDW62_RS21055 (4180237) | 4180237..4180638 | + | 402 | WP_001258750.1 | TIR domain-containing protein | - |
| QDW62_RS21060 (4180649) | 4180649..4181614 | + | 966 | WP_000709408.1 | caspase family protein | - |
| QDW62_RS21065 (4181645) | 4181645..4181998 | - | 354 | WP_001205452.1 | antiterminator Q family protein | - |
| QDW62_RS21070 (4182016) | 4182016..4183005 | - | 990 | WP_236295042.1 | DUF968 domain-containing protein | - |
| QDW62_RS21075 (4183013) | 4183013..4183810 | - | 798 | WP_001061416.1 | KilA-N domain-containing protein | - |
| QDW62_RS21080 (4183830) | 4183830..4184219 | - | 390 | WP_000767096.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QDW62_RS21085 (4184216) | 4184216..4184542 | - | 327 | WP_000210164.1 | LexA family transcriptional regulator | - |
| QDW62_RS21090 (4184542) | 4184542..4185036 | - | 495 | WP_074151952.1 | PerC family transcriptional regulator | - |
| QDW62_RS21095 (4185033) | 4185033..4185974 | - | 942 | WP_000104963.1 | helix-turn-helix domain-containing protein | - |
| QDW62_RS21100 (4185964) | 4185964..4186143 | - | 180 | WP_001250267.1 | DUF4222 domain-containing protein | - |
| QDW62_RS21105 (4186319) | 4186319..4186870 | - | 552 | WP_000515835.1 | protein YmfL | - |
| QDW62_RS21110 (4186914) | 4186914..4187114 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| QDW62_RS21115 (4187205) | 4187205..4187879 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| QDW62_RS21120 (4188221) | 4188221..4188715 | - | 495 | WP_000196298.1 | hypothetical protein | - |
| QDW62_RS21125 (4188956) | 4188956..4189275 | + | 320 | Protein_4135 | hypothetical protein | - |
| QDW62_RS21130 (4189357) | 4189357..4189893 | + | 537 | WP_000008241.1 | 5'-deoxynucleotidase | - |
| QDW62_RS21135 (4189884) | 4189884..4190246 | + | 363 | WP_001242749.1 | phage protein | - |
| QDW62_RS21140 (4190246) | 4190246..4190551 | + | 306 | WP_000206732.1 | protein YfdT | - |
| QDW62_RS21145 (4190551) | 4190551..4190901 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| QDW62_RS21150 (4190823) | 4190823..4191941 | + | 1119 | WP_001132557.1 | hypothetical protein ; Integrase | Integrase |
| QDW62_RS21160 (4192146) | 4192146..4193399 | - | 1254 | WP_000893279.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QDW62_RS21165 (4193411) | 4193411..4194514 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| QDW62_RS21170 (4194802) | 4194802..4195857 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| QDW62_RS21175 (4195896) | 4195896..4196297 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (4197015) | 4197015..4197095 | - | 81 | NuclAT_9 | - | - |
| - (4197015) | 4197015..4197095 | - | 81 | NuclAT_9 | - | - |
| - (4197015) | 4197015..4197095 | - | 81 | NuclAT_9 | - | - |
| - (4197015) | 4197015..4197095 | - | 81 | NuclAT_9 | - | - |
| QDW62_RS21180 (4196355) | 4196355..4197599 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| QDW62_RS21185 (4197691) | 4197691..4198149 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| QDW62_RS21190 (4198410) | 4198410..4199867 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| QDW62_RS21195 (4199924) | 4199924..4200445 | - | 522 | Protein_4148 | peptide chain release factor H | - |
| QDW62_RS21200 (4200444) | 4200444..4200647 | - | 204 | Protein_4149 | RtcB family protein | - |
| QDW62_RS21205 (4200893) | 4200893..4201345 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| QDW62_RS21210 (4201355) | 4201355..4201753 | - | 399 | WP_001263490.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| QDW62_RS21215 (4201756) | 4201756..4202049 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| QDW62_RS21220 (4202101) | 4202101..4203156 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| QDW62_RS21225 (4203227) | 4203227..4204012 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| QDW62_RS21230 (4203984) | 4203984..4205696 | + | 1713 | Protein_4155 | hypothetical protein | VF |
| QDW62_RS21235 (4205920) | 4205920..4206417 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| QDW62_RS21240 (4206593) | 4206593..4207366 | - | 774 | WP_015675129.1 | hypothetical protein | VF |
| QDW62_RS21245 (4207552) | 4207552..4207812 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| QDW62_RS21250 (4207815) | 4207815..4208093 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| QDW62_RS21255 (4208249) | 4208249..4208989 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| QDW62_RS21260 (4208960) | 4208960..4209727 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| QDW62_RS21265 (4209933) | 4209933..4210511 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|