MGE detailed information
MGE type: Mobilizable plasmid MGE length: 24405 bp
Accession: NZ_CP122627 Location: 1..24405 Organism: Escherichia coli strain ETEC4089 Replicon: plasmid unnamed2
Accession: NZ_CP122627 Location: 1..24405 Organism: Escherichia coli strain ETEC4089 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW64_RS23530 (QDW64_23525) | 1..2745 | + | 2745 | WP_001096401.1 | Type IV secretion system protein virB4 | VF |
| QDW64_RS23535 (QDW64_23530) | 2760..3464 | + | 705 | WP_000819778.1 | type IV secretion system protein | - |
| QDW64_RS23540 (QDW64_23535) | 3476..3703 | + | 228 | WP_000720509.1 | EexN family lipoprotein | - |
| QDW64_RS23545 (QDW64_23540) | 3713..4783 | + | 1071 | WP_024187435.1 | type IV secretion system protein | - |
| QDW64_RS23550 (QDW64_23545) | 4833..4976 | + | 144 | WP_000825480.1 | hypothetical protein | - |
| QDW64_RS23555 (QDW64_23550) | 4969..5652 | + | 684 | WP_000139290.1 | Type IV secretion system protein PtlE | VF |
| QDW64_RS23560 (QDW64_23555) | 5652..6557 | + | 906 | WP_001230135.1 | P-type conjugative transfer protein VirB9 | - |
| QDW64_RS23565 (QDW64_23560) | 6599..7864 | + | 1266 | WP_000129037.1 | Type IV secretion system protein virB10 | VF |
| QDW64_RS23570 (QDW64_23565) | 7848..8039 | + | 192 | WP_000995652.1 | hypothetical protein | - |
| QDW64_RS23575 (QDW64_23570) | 8029..9054 | + | 1026 | WP_000125556.1 | Type IV secretion system protein VirB11 | VF |
| QDW64_RS23580 (QDW64_23575) | 9051..9449 | + | 399 | WP_021533590.1 | cag pathogenicity island Cag12 family protein | - |
| QDW64_RS23585 (QDW64_23580) | 9478..9777 | + | 300 | WP_000716758.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QDW64_RS23590 (QDW64_23585) | 9780..9995 | + | 216 | WP_001090643.1 | hypothetical protein | - |
| QDW64_RS23595 (QDW64_23590) | 10023..10328 | + | 306 | WP_000910475.1 | hypothetical protein | - |
| QDW64_RS23600 (QDW64_23595) | 11138..12865 | + | 1728 | WP_001068080.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QDW64_RS23605 (QDW64_23600) | 12875..13609 | + | 735 | WP_000905147.1 | MobC family replication-relaxation protein | - |
| QDW64_RS23610 (QDW64_23605) | 13613..14077 | + | 465 | WP_000697615.1 | thermonuclease family protein | - |
| QDW64_RS23615 (QDW64_23610) | 14087..14392 | + | 306 | Protein_17 | hypothetical protein | - |
| QDW64_RS23620 (QDW64_23615) | 14571..14834 | + | 264 | WP_001312455.1 | PilI type IV pilus biogenesis protein | - |
| QDW64_RS23625 (QDW64_23620) | 14866..15099 | - | 234 | WP_000024515.1 | hypothetical protein | - |
| QDW64_RS23630 (QDW64_23625) | 15139..15786 | - | 648 | WP_000214917.1 | ParA family protein | - |
| QDW64_RS23635 (QDW64_23630) | 16152..16502 | + | 351 | WP_000269926.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDW64_RS23640 (QDW64_23635) | 16499..16798 | + | 300 | WP_001259443.1 | XRE family transcriptional regulator | Antitoxin Detail |
| QDW64_RS23645 (QDW64_23640) | 16829..17074 | - | 246 | WP_001193619.1 | hypothetical protein | - |
| QDW64_RS23650 (QDW64_23645) | 17064..17321 | - | 258 | WP_000845367.1 | hypothetical protein | - |
| QDW64_RS23655 (QDW64_23650) | 17357..17899 | - | 543 | WP_000206647.1 | hypothetical protein | - |
| QDW64_RS23660 (QDW64_23655) | 18027..18560 | - | 534 | WP_001025389.1 | J domain-containing protein | - |
| QDW64_RS23665 (QDW64_23660) | 18931..19230 | - | 300 | WP_000113288.1 | hypothetical protein | - |
| QDW64_RS23670 (QDW64_23665) | 19304..19576 | - | 273 | WP_001272119.1 | hypothetical protein | - |
| QDW64_RS23675 (QDW64_23670) | 20527..21192 | - | 666 | WP_001350943.1 | RepA family replication protein | - |
| QDW64_RS23680 (QDW64_23675) | 21808..22173 | - | 366 | WP_000248966.1 | helix-turn-helix transcriptional regulator | - |
| QDW64_RS23685 (QDW64_23680) | 22428..22877 | + | 450 | WP_000995159.1 | transcription termination/antitermination NusG family protein | - |
| QDW64_RS23690 (QDW64_23685) | 22954..23166 | + | 213 | WP_001133545.1 | hypothetical protein | - |
| QDW64_RS23695 (QDW64_23690) | 23167..23373 | + | 207 | WP_001125884.1 | hypothetical protein | - |
| QDW64_RS23700 (QDW64_23695) | 23389..24093 | + | 705 | WP_000953548.1 | Type IV secretion system protein virB1 | VF |
| QDW64_RS23705 (QDW64_23700) | 24097..24393 | + | 297 | WP_000608756.1 | TrbC/VirB2 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|