NZ_CP1226252363598..2376407

MGE detailed information

MGE type: Genomic_island        MGE length: 12810 bp
Accession: NZ_CP122625        Location: 2363598..2376407         Organism: Escherichia coli strain ETEC4089       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QDW64_RS11765 (2363598) 2363598..2363864 + 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail
QDW64_RS11770 (2363864) 2363864..2365186 + 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
QDW64_RS11775 (2365498) 2365498..2365706 + 209 Protein_2303 AraC family transcriptional regulator -
QDW64_RS11780 (2365961) 2365961..2367187 + 1227 Protein_2304 Outer membrane usher protein FimD VF
QDW64_RS11785 (2367201) 2367201..2367731 + 531 WP_000876763.1 Protein FimF VF
QDW64_RS11790 (2367744) 2367744..2368247 + 504 WP_000825452.1 Protein FimG VF
QDW64_RS11795 (2368306) 2368306..2369220 + 915 WP_000520662.1 Type 1 fimbrin D-mannose specific adhesin VF
QDW64_RS11800 (2369554) 2369554..2371833 + 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
QDW64_RS11805 (2372081) 2372081..2372278 + 198 WP_000543384.1 two-component system connector SafA -
QDW64_RS11810 (2372353) 2372353..2373114 + 762 WP_000060492.1 acid stress response transcriptional regulator YdeO -
QDW64_RS11815 (2373516) 2373516..2375198 + 1683 WP_001295684.1 sulfatase -
QDW64_RS11820 (2375250) 2375250..2376407 + 1158 WP_001301030.1 anaerobic sulfatase maturase -
QDW64_RS11825 (2376373) 2376373..2376495 - 123 WP_123039029.1 hypothetical protein -
QDW64_RS11830 (2376698) 2376698..2378383 + 1686 WP_000628576.1 ABC transporter ATP-binding protein/permease -
QDW64_RS11835 (2378421) 2378421..2380793 + 2373 WP_049284067.1 TonB-dependent receptor plug domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0.003
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0.003
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0.003
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0.003
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.005
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.006
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0.003
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0.003
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0.003
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0.003
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0.003
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0.003
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0.003