MGE detailed information
MGE type: Prophage MGE length: 65901 bp
Accession: NZ_CP122620 Location: 2997696..3063596 Organism: Escherichia coli strain ETEC4090 Replicon: chromosome
Accession: NZ_CP122620 Location: 2997696..3063596 Organism: Escherichia coli strain ETEC4090 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW69_RS15155 (2993049) | 2993049..2994747 | - | 1699 | Protein_2965 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
| QDW69_RS15160 (2994985) | 2994985..2995167 | - | 183 | WP_000009307.1 | DUF2158 domain-containing protein | - |
| QDW69_RS15165 (2995246) | 2995246..2996163 | - | 918 | WP_000922682.1 | DUF808 domain-containing protein | - |
| QDW69_RS15170 (2996336) | 2996336..2997256 | + | 921 | WP_001212238.1 | drug/metabolite exporter YedA | - |
| QDW69_RS15175 (2997245) | 2997245..2997715 | - | 471 | WP_000786014.1 | VSPR family DNA mismatch endonuclease | - |
| QDW69_RS15180 (2997696) | 2997696..2999114 | - | 1419 | WP_001157292.1 | DNA-cytosine methyltransferase | - |
| QDW69_RS15185 (2999181) | 2999181..2999876 | - | 696 | WP_000365567.1 | phosphohydrolase | - |
| QDW69_RS15190 (2999916) | 2999916..3000197 | - | 282 | WP_001372217.1 | cell division protein DrpB | - |
| QDW69_RS15195 (3000847) | 3000847..3001920 | + | 1074 | WP_000824361.1 | porin | - |
| QDW69_RS15200 (3002513) | 3002513..3003364 | + | 852 | WP_000218205.1 | protein deglycase HchA | - |
| QDW69_RS15205 (3003472) | 3003472..3004359 | - | 888 | Protein_2975 | two-component system sensor histidine kinase HprS | - |
| QDW69_RS15210 (3004416) | 3004416..3005113 | + | 698 | WP_282867707.1 | IS1 family transposase | - |
| QDW69_RS15215 (3005130) | 3005130..3005606 | - | 477 | Protein_2977 | two-component system sensor histidine kinase HprS | - |
| QDW69_RS15220 (3005606) | 3005606..3006277 | - | 672 | WP_001339045.1 | Transcriptional regulatory protein HprR | VF |
| QDW69_RS15225 (3006410) | 3006410..3006823 | + | 414 | WP_000920132.1 | hydroxyisourate hydrolase | - |
| QDW69_RS15230 (3006932) | 3006932..3007936 | + | 1005 | WP_000740098.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| QDW69_RS15235 (3007937) | 3007937..3008572 | + | 636 | WP_001240102.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| QDW69_RS15240 (3008829) | 3008829..3009479 | + | 651 | WP_001007789.1 | metal-binding protein ZinT | - |
| QDW69_RS15245 (3009822) | 3009822..3010352 | + | 531 | WP_001079074.1 | cytochrome b | - |
| QDW69_RS15250 (3011844) | 3011844..3012425 | - | 582 | WP_000885571.1 | tail fiber assembly protein | - |
| QDW69_RS15255 (3012425) | 3012425..3015838 | - | 3414 | WP_282867709.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QDW69_RS15260 (3015903) | 3015903..3016502 | - | 600 | WP_001233158.1 | Outer membrane protein X | VF |
| QDW69_RS15265 (3016570) | 3016570..3019965 | - | 3396 | WP_000515470.1 | host specificity protein J | - |
| QDW69_RS15270 (3020026) | 3020026..3020568 | - | 543 | WP_001377948.1 | tail assembly protein | - |
| QDW69_RS15275 (3020565) | 3020565..3021308 | - | 744 | WP_063096966.1 | C40 family peptidase | - |
| QDW69_RS15280 (3021313) | 3021313..3022011 | - | 699 | WP_001152456.1 | phage minor tail protein L | - |
| QDW69_RS15285 (3022011) | 3022011..3022367 | - | 357 | WP_001330090.1 | phage tail protein | - |
| QDW69_RS15290 (3022345) | 3022345..3025572 | - | 3228 | WP_024257906.1 | phage tail tape measure protein | - |
| QDW69_RS15295 (3025619) | 3025619..3025909 | - | 291 | WP_001211636.1 | DUF4035 domain-containing protein | - |
| QDW69_RS15300 (3025926) | 3025926..3026291 | - | 366 | Protein_2994 | phage tail assembly chaperone | - |
| QDW69_RS15305 (3026306) | 3026306..3027010 | - | 705 | WP_000097533.1 | hypothetical protein | - |
| QDW69_RS15310 (3027070) | 3027070..3027414 | - | 345 | WP_001209399.1 | DUF3168 domain-containing protein | - |
| QDW69_RS15315 (3027456) | 3027456..3029126 | - | 1671 | Protein_2997 | DUF927 domain-containing protein | - |
| QDW69_RS15320 (3029123) | 3029123..3029437 | - | 315 | WP_000728898.1 | DUF4222 domain-containing protein | - |
| QDW69_RS15325 (3029495) | 3029495..3029653 | - | 159 | WP_236268695.1 | hypothetical protein | - |
| QDW69_RS15330 (3029646) | 3029646..3029879 | - | 234 | WP_029593906.1 | hypothetical protein | - |
| QDW69_RS15335 (3029872) | 3029872..3030111 | - | 240 | WP_230905650.1 | hypothetical protein | - |
| QDW69_RS15340 (3030101) | 3030101..3030307 | - | 207 | WP_001247061.1 | host cell division inhibitor Icd-like protein | - |
| QDW69_RS15345 (3030506) | 3030506..3030685 | + | 180 | WP_000201462.1 | YlcI/YnfO family protein | - |
| QDW69_RS15350 (3031297) | 3031297..3031875 | - | 579 | WP_001038671.1 | BRO family protein | - |
| QDW69_RS15355 (3031933) | 3031933..3032211 | - | 279 | WP_021530547.1 | AlpA family phage regulatory protein | - |
| QDW69_RS15360 (3032275) | 3032275..3032496 | - | 222 | WP_032166742.1 | AlpA family phage regulatory protein | - |
| QDW69_RS15365 (3032474) | 3032474..3033697 | - | 1224 | WP_169031283.1 | Prophage integrase IntA ; Integrase | Integrase |
| QDW69_RS15370 (3033868) | 3033868..3034896 | - | 1029 | Protein_3008 | terminase large subunit | - |
| QDW69_RS15375 (3034896) | 3034896..3035378 | - | 483 | WP_024262801.1 | phage terminase small subunit P27 family | - |
| QDW69_RS15380 (3035525) | 3035525..3035875 | - | 351 | WP_001140106.1 | HNH endonuclease signature motif containing protein | - |
| QDW69_RS15385 (3035896) | 3035896..3036192 | - | 297 | WP_000004120.1 | hypothetical protein | - |
| QDW69_RS15390 (3036353) | 3036353..3036481 | - | 129 | WP_000093649.1 | hypothetical protein | - |
| QDW69_RS15395 (3036517) | 3036517..3036786 | + | 270 | WP_000159741.1 | hypothetical protein | - |
| QDW69_RS15400 (3036767) | 3036767..3036892 | - | 126 | WP_001372763.1 | hypothetical protein | - |
| QDW69_RS15405 (3036919) | 3036919..3037296 | - | 378 | WP_000014557.1 | M15 family metallopeptidase | - |
| QDW69_RS15410 (3037299) | 3037299..3037574 | - | 276 | WP_000950581.1 | phage holin family protein | - |
| QDW69_RS15415 (3037564) | 3037564..3037956 | - | 393 | WP_001294582.1 | putative holin | - |
| QDW69_RS15420 (3038044) | 3038044..3038196 | - | 153 | WP_000833644.1 | DUF3927 family protein | - |
| QDW69_RS15425 (3038193) | 3038193..3038618 | - | 426 | WP_000466934.1 | tellurite/colicin resistance protein | - |
| QDW69_RS15450 (3039712) | 3039712..3040401 | - | 690 | WP_236268663.1 | bacteriophage antitermination protein Q | - |
| QDW69_RS15455 (3040398) | 3040398..3040763 | - | 366 | WP_000140019.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QDW69_RS15460 (3040765) | 3040765..3041820 | - | 1056 | WP_230905643.1 | DUF968 domain-containing protein | - |
| QDW69_RS15465 (3041822) | 3041822..3042094 | - | 273 | WP_071533677.1 | hypothetical protein | - |
| QDW69_RS15470 (3042196) | 3042196..3042552 | - | 357 | WP_249540601.1 | hypothetical protein | - |
| QDW69_RS15475 (3042579) | 3042579..3043316 | - | 738 | WP_282867727.1 | XRE family transcriptional regulator | - |
| QDW69_RS15480 (3043327) | 3043327..3043920 | - | 594 | WP_001179381.1 | hypothetical protein | - |
| QDW69_RS15485 (3044094) | 3044094..3044195 | - | 102 | Protein_3027 | Hok/Gef family protein | - |
| QDW69_RS15490 (3044371) | 3044371..3045417 | - | 1047 | WP_000200161.1 | AAA family ATPase | - |
| QDW69_RS15495 (3045625) | 3045625..3045884 | - | 260 | Protein_3029 | DNA-binding protein | - |
| QDW69_RS15500 (3045902) | 3045902..3046357 | - | 456 | WP_001151173.1 | DUF977 family protein | - |
| QDW69_RS15505 (3046374) | 3046374..3047144 | - | 771 | WP_000450698.1 | DUF1627 domain-containing protein | - |
| QDW69_RS15510 (3047167) | 3047167..3047913 | - | 747 | WP_000788975.1 | ATP-binding protein | - |
| QDW69_RS15515 (3047920) | 3047920..3048867 | - | 948 | WP_063082131.1 | helix-turn-helix domain-containing protein | - |
| QDW69_RS15520 (3048891) | 3048891..3049316 | - | 426 | WP_000693861.1 | toxin YdaT family protein | - |
| QDW69_RS15525 (3049313) | 3049313..3049615 | - | 303 | WP_000172735.1 | transcriptional regulator | - |
| QDW69_RS15530 (3049713) | 3049713..3050084 | + | 372 | WP_001169685.1 | hypothetical protein | - |
| QDW69_RS15535 (3050105) | 3050105..3050296 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| QDW69_RS15540 (3050298) | 3050298..3050576 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDW69_RS15545 (3050868) | 3050868..3051020 | + | 153 | WP_000379558.1 | DUF1391 family protein | - |
| QDW69_RS15550 (3051032) | 3051032..3051397 | + | 366 | WP_001320327.1 | hypothetical protein | - |
| QDW69_RS15555 (3051366) | 3051366..3051566 | - | 201 | WP_000159335.1 | hypothetical protein | - |
| QDW69_RS15560 (3052069) | 3052069..3052257 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QDW69_RS15565 (3052254) | 3052254..3052445 | + | 192 | WP_001083273.1 | lysis protein YdfD | - |
| QDW69_RS15570 (3052539) | 3052539..3055010 | + | 2472 | WP_213831716.1 | exonuclease | - |
| QDW69_RS15575 (3055072) | 3055072..3055341 | + | 270 | WP_000003742.1 | excisionase | - |
| QDW69_RS15580 (3055310) | 3055310..3056428 | + | 1119 | WP_059239312.1 | hypothetical protein ; Integrase | Integrase |
| QDW69_RS15585 (3056595) | 3056595..3057389 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| QDW69_RS15590 (3057386) | 3057386..3058432 | + | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| QDW69_RS15595 (3058490) | 3058490..3058951 | + | 462 | WP_000076376.1 | DUF3592 domain-containing protein | - |
| QDW69_RS15600 (3058948) | 3058948..3059736 | + | 789 | WP_000713462.1 | TPM domain-containing protein | - |
| QDW69_RS15605 (3059856) | 3059856..3060695 | - | 840 | WP_000952737.1 | NAD-dependent protein deacylase | - |
| QDW69_RS15610 (3060711) | 3060711..3061622 | - | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| QDW69_RS15615 (3061651) | 3061651..3062895 | - | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| QDW69_RS15620 (3062895) | 3062895..3063596 | - | 702 | WP_001033694.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| QDW69_RS15625 (3063589) | 3063589..3064788 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| QDW69_RS15630 (3065050) | 3065050..3066123 | + | 1074 | WP_000810253.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|