MGE detailed information
MGE type: Prophage MGE length: 128429 bp
Accession: NZ_CP122620 Location: 1997902..2126330 Organism: Escherichia coli strain ETEC4090 Replicon: chromosome
Accession: NZ_CP122620 Location: 1997902..2126330 Organism: Escherichia coli strain ETEC4090 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW69_RS09810 (1993166) | 1993166..1994653 | + | 1488 | WP_001323172.1 | toxic metabolite efflux MATE transporter YeeO | - |
| QDW69_RS09820 (1995287) | 1995287..1996003 | - | 717 | WP_000532923.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| QDW69_RS09825 (1996346) | 1996346..1997800 | - | 1455 | WP_269709046.1 | AMP nucleosidase | - |
| QDW69_RS09830 (1997902) | 1997902..1999218 | - | 1317 | Protein_1921 | shikimate transporter | - |
| QDW69_RS09835 (1999533) | 1999533..2000585 | + | 1053 | WP_000480505.1 | glycosyltransferase family 9 protein | - |
| QDW69_RS09840 (2000847) | 2000847..2007922 | - | 7076 | Protein_1923 | inverse autotransporter adhesin YeeJ | - |
| QDW69_RS09850 (2008412) | 2008412..2009209 | - | 798 | WP_001300307.1 | DgsA anti-repressor MtfA | - |
| QDW69_RS09860 (2009420) | 2009420..2010470 | - | 1051 | Protein_1925 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QDW69_RS09865 (2010470) | 2010470..2010673 | - | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| QDW69_RS09870 (2010732) | 2010732..2011256 | - | 525 | WP_072132219.1 | 3'-5' exonuclease | - |
| QDW69_RS09875 (2012667) | 2012667..2013032 | - | 366 | Protein_1928 | exonuclease | - |
| QDW69_RS09880 (2013267) | 2013267..2013458 | - | 192 | WP_001070257.1 | DUF1482 family protein | - |
| QDW69_RS09885 (2013455) | 2013455..2013643 | - | 189 | WP_000854562.1 | cell division inhibition protein DicB | - |
| QDW69_RS09890 (2014211) | 2014211..2014429 | - | 219 | WP_001171946.1 | protein YdfC | - |
| QDW69_RS09895 (2014459) | 2014459..2014587 | - | 129 | WP_000344974.1 | protein YdfB | - |
| QDW69_RS09900 (2014589) | 2014589..2014744 | - | 156 | WP_064226608.1 | DUF1391 family protein | - |
| QDW69_RS09905 (2015037) | 2015037..2015375 | - | 339 | WP_001397087.1 | S24 family peptidase | - |
| QDW69_RS09910 (2015767) | 2015767..2016009 | + | 243 | WP_000747951.1 | Cro/CI family transcriptional regulator | - |
| QDW69_RS09915 (2015993) | 2015993..2016418 | + | 426 | WP_000693883.1 | toxin YdaT family protein | - |
| QDW69_RS09920 (2016490) | 2016490..2017560 | + | 1071 | WP_001262361.1 | hypothetical protein | - |
| QDW69_RS09925 (2017601) | 2017601..2018023 | + | 423 | WP_001151221.1 | DUF977 family protein | - |
| QDW69_RS09930 (2018170) | 2018170..2018979 | - | 810 | WP_000161640.1 | hypothetical protein | - |
| QDW69_RS09935 (2019560) | 2019560..2020633 | - | 1074 | WP_001178394.1 | IS481 family transposase ISKpn28 | Transposase |
| QDW69_RS09940 (2020705) | 2020705..2020860 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDW69_RS09945 (2021028) | 2021028..2021306 | + | 279 | WP_032084570.1 | hypothetical protein | - |
| QDW69_RS09950 (2021308) | 2021308..2022363 | + | 1056 | WP_001265309.1 | DUF968 domain-containing protein | - |
| QDW69_RS09955 (2022364) | 2022364..2022729 | + | 366 | WP_000139991.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QDW69_RS09960 (2022726) | 2022726..2023394 | + | 669 | WP_001064899.1 | bacteriophage antitermination protein Q | - |
| QDW69_RS09965 (2023640) | 2023640..2023803 | + | 164 | Protein_1946 | TrmB family transcriptional regulator | - |
| QDW69_RS09970 (2023920) | 2023920..2024633 | + | 714 | WP_096098552.1 | helix-turn-helix domain-containing protein | - |
| QDW69_RS09990 (2026066) | 2026066..2026491 | + | 426 | WP_000466930.1 | tellurite/colicin resistance protein | - |
| QDW69_RS09995 (2026488) | 2026488..2026640 | + | 153 | WP_000833657.1 | DUF3927 family protein | - |
| QDW69_RS10000 (2026733) | 2026733..2027125 | + | 393 | WP_001294581.1 | putative holin | - |
| QDW69_RS10005 (2027115) | 2027115..2027390 | + | 276 | WP_000950564.1 | phage holin family protein | - |
| QDW69_RS10010 (2027393) | 2027393..2027770 | + | 378 | WP_000014554.1 | M15 family metallopeptidase | - |
| QDW69_RS10015 (2028010) | 2028010..2028360 | + | 351 | WP_001140046.1 | HNH endonuclease | - |
| QDW69_RS10020 (2028508) | 2028508..2028750 | + | 243 | Protein_1954 | phage terminase small subunit P27 family | - |
| QDW69_RS10025 (2028802) | 2028802..2029251 | + | 450 | WP_001312916.1 | HK97 gp10 family phage protein | - |
| QDW69_RS10030 (2029248) | 2029248..2029592 | + | 345 | WP_001209399.1 | DUF3168 domain-containing protein | - |
| QDW69_RS10035 (2029652) | 2029652..2030356 | + | 705 | WP_000097533.1 | hypothetical protein | - |
| QDW69_RS10040 (2030371) | 2030371..2030736 | + | 366 | Protein_1958 | phage tail assembly chaperone | - |
| QDW69_RS10045 (2030753) | 2030753..2031043 | + | 291 | WP_001211641.1 | DUF4035 domain-containing protein | - |
| QDW69_RS10050 (2031089) | 2031089..2034328 | + | 3240 | WP_236268576.1 | phage tail tape measure protein | - |
| QDW69_RS10055 (2034306) | 2034306..2034662 | + | 357 | WP_040079256.1 | phage tail protein | - |
| QDW69_RS10060 (2034662) | 2034662..2035360 | + | 699 | WP_021528581.1 | phage minor tail protein L | - |
| QDW69_RS10065 (2035365) | 2035365..2036108 | + | 744 | WP_112014539.1 | C40 family peptidase | - |
| QDW69_RS10070 (2036105) | 2036105..2036677 | + | 573 | WP_230905660.1 | tail assembly protein | - |
| QDW69_RS10075 (2036738) | 2036738..2040151 | + | 3414 | WP_236268574.1 | host specificity protein J | - |
| QDW69_RS10080 (2040222) | 2040222..2040821 | + | 600 | WP_112041072.1 | Outer membrane protein X | VF |
| QDW69_RS10085 (2040886) | 2040886..2044296 | + | 3411 | WP_236268572.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QDW69_RS10090 (2044296) | 2044296..2044880 | + | 585 | WP_230905591.1 | tail fiber assembly protein | - |
| QDW69_RS10095 (2044996) | 2044996..2045244 | - | 249 | WP_001217539.1 | DinI-like family protein | - |
| QDW69_RS10100 (2045507) | 2045507..2045602 | - | 96 | Protein_1970 | hypothetical protein | - |
| QDW69_RS10105 (2045599) | 2045599..2046165 | - | 567 | WP_000891621.1 | hydrolase | - |
| QDW69_RS10110 (2046475) | 2046475..2048247 | + | 1773 | WP_001258678.1 | aspartate--tRNA ligase | - |
| QDW69_RS10115 (2048365) | 2048365..2048817 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| QDW69_RS10120 (2048846) | 2048846..2049586 | + | 741 | WP_000907248.1 | putative transcriptional regulatory protein YebC | VF |
| QDW69_RS10125 (2049621) | 2049621..2050142 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| QDW69_RS10130 (2050144) | 2050144..2050746 | - | 603 | WP_001024932.1 | YebB family permuted papain-like enzyme | - |
| QDW69_RS10135 (2050817) | 2050817..2050882 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| QDW69_RS10140 (2051021) | 2051021..2051632 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| QDW69_RS10145 (2051641) | 2051641..2052651 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| QDW69_RS10150 (2052798) | 2052798..2053583 | - | 786 | WP_000571480.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| QDW69_RS10155 (2053580) | 2053580..2054335 | - | 756 | WP_000203010.1 | Zinc import ATP-binding protein ZnuC | VF |
| QDW69_RS10160 (2054414) | 2054414..2055346 | + | 933 | WP_001300644.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| QDW69_RS10165 (2055362) | 2055362..2056684 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| QDW69_RS10170 (2056804) | 2056804..2057775 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| QDW69_RS10175 (2057906) | 2057906..2059348 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| QDW69_RS10180 (2059476) | 2059476..2060345 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| QDW69_RS10185 (2060683) | 2060683..2062158 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| QDW69_RS10190 (2062393) | 2062393..2064204 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| QDW69_RS10195 (2064241) | 2064241..2064882 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| QDW69_RS10200 (2064938) | 2064938..2066116 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QDW69_RS10205 (2066250) | 2066250..2066540 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| QDW69_RS10210 (2066607) | 2066607..2066963 | + | 357 | WP_001295500.1 | protein YebF | - |
| QDW69_RS10215 (2067290) | 2067290..2067949 | + | 660 | WP_000024757.1 | tellurite resistance TerB family protein | - |
| QDW69_RS10220 (2068158) | 2068158..2070218 | + | 2061 | WP_000936927.1 | oligopeptidase B | - |
| QDW69_RS10225 (2070215) | 2070215..2070877 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| QDW69_RS10230 (2070901) | 2070901..2071557 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| QDW69_RS10235 (2071659) | 2071659..2071889 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| QDW69_RS10240 (2072028) | 2072028..2072402 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| QDW69_RS10245 (2072406) | 2072406..2073278 | + | 873 | WP_000879289.1 | copper homeostasis membrane protein CopD | - |
| QDW69_RS10250 (2073291) | 2073291..2073632 | + | 342 | WP_000976476.1 | YebY family protein | - |
| QDW69_RS10255 (2074025) | 2074025..2075101 | - | 1077 | WP_053508942.1 | hypothetical protein ; Integrase | Integrase |
| QDW69_RS10260 (2075067) | 2075067..2075348 | - | 282 | WP_077248935.1 | excisionase | - |
| - (2075459) | 2075459..2075637 | + | 179 | NuclAT_5 | - | Antitoxin Detail |
| - (2075459) | 2075459..2075637 | + | 179 | NuclAT_5 | - | Antitoxin Detail |
| - (2075459) | 2075459..2075637 | + | 179 | NuclAT_5 | - | Antitoxin Detail |
| - (2075459) | 2075459..2075637 | + | 179 | NuclAT_5 | - | Antitoxin Detail |
| QDW69_RS10265 (2075455) | 2075455..2075643 | - | 189 | WP_021529595.1 | DUF1187 family protein | - |
| QDW69_RS10270 (2075636) | 2075636..2075830 | - | 195 | WP_187182214.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| QDW69_RS10275 (2075894) | 2075894..2076982 | - | 1089 | WP_230905604.1 | RecT family recombinase | - |
| QDW69_RS10280 (2076997) | 2076997..2080116 | - | 3120 | WP_230905603.1 | exodeoxyribonuclease VIII | - |
| QDW69_RS10285 (2080140) | 2080140..2080436 | - | 297 | WP_023908491.1 | hypothetical protein | - |
| QDW69_RS10290 (2080511) | 2080511..2080681 | - | 171 | WP_230905606.1 | Rtr1/RPAP2 family protein phosphatase | - |
| QDW69_RS10295 (2080681) | 2080681..2080902 | - | 222 | WP_230905602.1 | killing protein KilR | - |
| QDW69_RS10300 (2081465) | 2081465..2081683 | - | 219 | WP_001171946.1 | protein YdfC | - |
| QDW69_RS10305 (2081713) | 2081713..2081841 | - | 129 | WP_000344928.1 | protein YdfB | - |
| QDW69_RS10310 (2081843) | 2081843..2081998 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| QDW69_RS10315 (2082296) | 2082296..2082715 | - | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| QDW69_RS10320 (2082795) | 2082795..2083049 | + | 255 | WP_001072337.1 | hypothetical protein | - |
| QDW69_RS10325 (2083046) | 2083046..2083471 | + | 426 | WP_000693850.1 | toxin YdaT family protein | - |
| QDW69_RS10330 (2083543) | 2083543..2084613 | + | 1071 | WP_074471877.1 | phage replisome organizer | - |
| QDW69_RS10335 (2084620) | 2084620..2085366 | + | 747 | WP_149448897.1 | ATP-binding protein | - |
| QDW69_RS10340 (2085389) | 2085389..2086150 | + | 762 | WP_230905612.1 | DUF1627 domain-containing protein | - |
| QDW69_RS10345 (2086166) | 2086166..2086570 | + | 405 | WP_063118397.1 | DUF977 family protein | - |
| QDW69_RS10350 (2086712) | 2086712..2086897 | + | 186 | Protein_2020 | hypothetical protein | - |
| QDW69_RS10355 (2086899) | 2086899..2087255 | + | 357 | WP_000403783.1 | hypothetical protein | - |
| QDW69_RS10360 (2087349) | 2087349..2087531 | + | 183 | WP_024238437.1 | hypothetical protein | - |
| QDW69_RS10365 (2087524) | 2087524..2087700 | + | 177 | WP_000753067.1 | hypothetical protein | - |
| QDW69_RS10370 (2087697) | 2087697..2088056 | + | 360 | WP_063123852.1 | hypothetical protein | - |
| QDW69_RS10375 (2088195) | 2088195..2088599 | + | 405 | WP_063123853.1 | hypothetical protein | - |
| QDW69_RS10380 (2088603) | 2088603..2089175 | + | 573 | WP_230905681.1 | hypothetical protein | - |
| QDW69_RS10385 (2089467) | 2089467..2089622 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDW69_RS10390 (2089790) | 2089790..2090389 | + | 600 | WP_000940341.1 | DUF1367 family protein | - |
| QDW69_RS10395 (2090389) | 2090389..2090679 | + | 291 | WP_000228027.1 | DUF1364 domain-containing protein | - |
| QDW69_RS10400 (2090676) | 2090676..2091218 | + | 543 | WP_230905727.1 | DUF1133 family protein | - |
| QDW69_RS10415 (2092309) | 2092309..2092734 | + | 426 | WP_000466940.1 | tellurite/colicin resistance protein | - |
| QDW69_RS10420 (2092731) | 2092731..2092883 | + | 153 | WP_230905608.1 | DUF3927 family protein | - |
| QDW69_RS10425 (2092975) | 2092975..2093367 | + | 393 | WP_063123859.1 | putative holin | - |
| QDW69_RS10430 (2093357) | 2093357..2093632 | + | 276 | WP_000950567.1 | phage holin family protein | - |
| QDW69_RS10435 (2093635) | 2093635..2094012 | + | 378 | WP_000014549.1 | M15 family metallopeptidase | - |
| QDW69_RS10440 (2094382) | 2094382..2094681 | + | 300 | WP_225528520.1 | hypothetical protein | - |
| QDW69_RS10445 (2094805) | 2094805..2095062 | + | 258 | Protein_2037 | ParB/Srx family N-terminal domain-containing protein | - |
| QDW69_RS10450 (2095586) | 2095586..2096518 | + | 933 | WP_236265485.1 | hypothetical protein | - |
| QDW69_RS10455 (2096496) | 2096496..2096705 | + | 210 | WP_053507844.1 | hypothetical protein | - |
| QDW69_RS10460 (2096709) | 2096709..2097800 | + | 1092 | WP_230905621.1 | terminase small subunit | - |
| QDW69_RS10465 (2097790) | 2097790..2099118 | + | 1329 | WP_000021154.1 | terminase | - |
| QDW69_RS10470 (2099137) | 2099137..2100573 | + | 1437 | WP_001774832.1 | DUF1073 domain-containing protein | - |
| QDW69_RS10475 (2100518) | 2100518..2101351 | + | 834 | WP_001018384.1 | hypothetical protein | - |
| QDW69_RS10480 (2101332) | 2101332..2102654 | + | 1323 | WP_063080817.1 | DUF2213 domain-containing protein | - |
| QDW69_RS10485 (2102647) | 2102647..2103264 | + | 618 | WP_001353212.1 | hypothetical protein | - |
| QDW69_RS10490 (2103279) | 2103279..2104307 | + | 1029 | WP_058107732.1 | hypothetical protein | - |
| QDW69_RS10495 (2104365) | 2104365..2104835 | + | 471 | WP_000780862.1 | hypothetical protein | - |
| QDW69_RS10500 (2104835) | 2104835..2105275 | + | 441 | WP_000175376.1 | hypothetical protein | - |
| QDW69_RS10505 (2105272) | 2105272..2105712 | + | 441 | WP_042966457.1 | hypothetical protein | - |
| QDW69_RS10510 (2105699) | 2105699..2106643 | + | 945 | WP_063080816.1 | hypothetical protein | - |
| QDW69_RS10515 (2106643) | 2106643..2107980 | + | 1338 | WP_063080815.1 | hypothetical protein | - |
| QDW69_RS10520 (2108004) | 2108004..2108435 | + | 432 | WP_000613368.1 | hypothetical protein | - |
| QDW69_RS10525 (2108432) | 2108432..2109049 | + | 618 | WP_064226517.1 | hypothetical protein | - |
| QDW69_RS10530 (2109114) | 2109114..2111195 | + | 2082 | WP_282868099.1 | lytic transglycosylase domain-containing protein | - |
| QDW69_RS10535 (2111199) | 2111199..2111867 | + | 669 | WP_000056324.1 | hypothetical protein | - |
| QDW69_RS10540 (2111864) | 2111864..2112130 | + | 267 | WP_000209265.1 | hypothetical protein | - |
| QDW69_RS10545 (2112130) | 2112130..2113137 | + | 1008 | WP_063080812.1 | hypothetical protein | - |
| QDW69_RS10550 (2113137) | 2113137..2113850 | + | 714 | WP_063080811.1 | hypothetical protein | - |
| QDW69_RS10555 (2114304) | 2114304..2114651 | + | 348 | WP_063102640.1 | hypothetical protein | - |
| QDW69_RS10560 (2114863) | 2114863..2115186 | - | 324 | Protein_2060 | antA/AntB antirepressor family protein | - |
| QDW69_RS10565 (2115522) | 2115522..2116592 | + | 1071 | WP_224491994.1 | hypothetical protein | - |
| QDW69_RS10570 (2116630) | 2116630..2117856 | + | 1227 | WP_230905613.1 | baseplate J/gp47 family protein | - |
| QDW69_RS10575 (2117840) | 2117840..2118466 | + | 627 | WP_001199731.1 | hypothetical protein | - |
| QDW69_RS10580 (2118463) | 2118463..2119980 | + | 1518 | WP_230905614.1 | phage tail protein | - |
| QDW69_RS10585 (2119983) | 2119983..2120528 | + | 546 | WP_000902852.1 | tail fiber assembly protein | - |
| QDW69_RS10590 (2120552) | 2120552..2122234 | + | 1683 | Protein_2066 | prophage tail fiber N-terminal domain-containing protein | - |
| QDW69_RS10595 (2122546) | 2122546..2123109 | + | 564 | WP_236265168.1 | DUF4376 domain-containing protein | - |
| QDW69_RS10600 (2123578) | 2123578..2124234 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| QDW69_RS10605 (2124235) | 2124235..2124426 | - | 192 | WP_000457842.1 | YebW family protein | - |
| QDW69_RS10610 (2124531) | 2124531..2124767 | - | 237 | WP_001295499.1 | YebV family protein | - |
| QDW69_RS10615 (2124885) | 2124885..2126324 | - | 1440 | WP_001352260.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QDW69_RS10620 (2126404) | 2126404..2129037 | - | 2634 | WP_046788600.1 | lipid-binding membrane homeostasis protein YebT | - |
| QDW69_RS10625 (2129006) | 2129006..2130289 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| QDW69_RS10630 (2130419) | 2130419..2130916 | + | 498 | WP_001043877.1 | L-methionine (R)-S-oxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|