MGE detailed information
MGE type: Genomic_island MGE length: 26719 bp
Accession: NZ_CP122617 Location: 4153882..4180600 Organism: Escherichia coli strain ETEC4091 Replicon: chromosome
Accession: NZ_CP122617 Location: 4153882..4180600 Organism: Escherichia coli strain ETEC4091 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW52_RS20140 (4149361) | 4149361..4149864 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| QDW52_RS20145 (4149877) | 4149877..4150407 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| QDW52_RS20150 (4150417) | 4150417..4153053 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| QDW52_RS20155 (4153120) | 4153120..4153845 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| QDW52_RS20160 (4153882) | 4153882..4154421 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| QDW52_RS20165 (4154486) | 4154486..4155034 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| QDW52_RS20170 (4155516) | 4155516..4156112 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| QDW52_RS20175 (4156590) | 4156590..4157192 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| QDW52_RS20180 (4158648) | 4158648..4159364 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| QDW52_RS20185 (4159384) | 4159384..4160490 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| QDW52_RS20190 (4160555) | 4160555..4161535 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| QDW52_RS20195 (4161645) | 4161645..4161850 | + | 206 | Protein_3950 | HNH endonuclease | - |
| QDW52_RS20200 (4162118) | 4162118..4163358 | - | 1241 | Protein_3951 | helicase YjhR | - |
| QDW52_RS20205 (4163474) | 4163474..4163605 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| QDW52_RS20210 (4164096) | 4164096..4164353 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| QDW52_RS20215 (4164365) | 4164365..4164910 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| QDW52_RS20220 (4164966) | 4164966..4165712 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| QDW52_RS20225 (4165881) | 4165881..4166099 | + | 219 | Protein_3956 | hypothetical protein | - |
| QDW52_RS20230 (4166137) | 4166137..4166253 | + | 117 | Protein_3957 | VOC family protein | - |
| QDW52_RS20235 (4166498) | 4166498..4167619 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| QDW52_RS20240 (4167616) | 4167616..4167894 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| QDW52_RS20245 (4167906) | 4167906..4169219 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| QDW52_RS20250 (4169232) | 4169232..4170038 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| QDW52_RS20255 (4170169) | 4170169..4170600 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| QDW52_RS20260 (4170612) | 4170612..4171244 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| QDW52_RS20265 (4171261) | 4171261..4172043 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| QDW52_RS20270 (4172346) | 4172346..4173134 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| QDW52_RS20275 (4173139) | 4173139..4174044 | + | 906 | WP_001335841.1 | dihydrodipicolinate synthase family protein | - |
| QDW52_RS20280 (4174055) | 4174055..4176022 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| QDW52_RS20285 (4176129) | 4176129..4177478 | + | 1350 | WP_001128363.1 | GntP family permease | - |
| QDW52_RS20290 (4177825) | 4177825..4178811 | + | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
| QDW52_RS20295 (4178852) | 4178852..4179697 | - | 846 | WP_016247886.1 | GRP family sugar transporter | - |
| QDW52_RS20300 (4179959) | 4179959..4180600 | - | 642 | WP_000439687.1 | L-fuculose-phosphate aldolase | - |
| QDW52_RS20305 (4180631) | 4180631..4181746 | - | 1116 | WP_001022014.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| QDW52_RS20310 (4181756) | 4181756..4183015 | - | 1260 | WP_021548606.1 | S-methyl-5-thioribose kinase | - |
| QDW52_RS20315 (4184004) | 4184004..4185545 | + | 1542 | WP_001518966.1 | IS21-like element ISEc12 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|