MGE detailed information
MGE type: Genomic_island MGE length: 43855 bp
Accession: NZ_CP122604 Location: 4558014..4601868 Organism: Escherichia coli strain ETEC6334 Replicon: chromosome
Accession: NZ_CP122604 Location: 4558014..4601868 Organism: Escherichia coli strain ETEC6334 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW51_RS22495 (4553019) | 4553019..4554716 | + | 1698 | WP_000068919.1 | protein-disulfide reductase DsbD | - |
| QDW51_RS22500 (4554753) | 4554753..4555328 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| QDW51_RS22510 (4555708) | 4555708..4556973 | + | 1266 | WP_001218821.1 | integrase arm-type DNA-binding domain-containing protein | - |
| QDW51_RS22515 (4557836) | 4557836..4558024 | + | 189 | WP_001051770.1 | hypothetical protein | - |
| QDW51_RS22520 (4558014) | 4558014..4559639 | + | 1626 | WP_000668951.1 | N-6 DNA methylase | - |
| QDW51_RS22525 (4559709) | 4559709..4562705 | - | 2997 | WP_001034306.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| QDW51_RS22530 (4562981) | 4562981..4563145 | - | 165 | WP_194244553.1 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| QDW51_RS22535 (4563391) | 4563391..4564677 | - | 1287 | WP_000005571.1 | McrC family protein | - |
| QDW51_RS22540 (4564670) | 4564670..4566727 | - | 2058 | WP_000366617.1 | AAA family ATPase | - |
| QDW51_RS22545 (4567609) | 4567609..4568780 | + | 1172 | WP_282832828.1 | IS3 family transposase ISCfr6 | Transposase |
| QDW51_RS22550 (4568807) | 4568807..4570420 | - | 1614 | WP_000080200.1 | IS66 family transposase ISEc23 | Transposase |
| QDW51_RS22555 (4570451) | 4570451..4570801 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QDW51_RS22560 (4570798) | 4570798..4571223 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QDW51_RS22565 (4571305) | 4571305..4571709 | - | 405 | WP_282832830.1 | putative zinc ribbon protein | - |
| QDW51_RS22570 (4571706) | 4571706..4572089 | - | 384 | WP_000271029.1 | putative zinc ribbon protein | - |
| QDW51_RS22575 (4572349) | 4572349..4572918 | - | 570 | WP_000220726.1 | inovirus Gp2 family protein | - |
| QDW51_RS22580 (4573122) | 4573122..4573295 | + | 174 | WP_001387062.1 | hypothetical protein | - |
| QDW51_RS22585 (4573535) | 4573535..4573684 | - | 150 | WP_071776717.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| QDW51_RS22590 (4574447) | 4574447..4574653 | + | 207 | WP_001095911.1 | AlpA family transcriptional regulator | - |
| QDW51_RS22595 (4574741) | 4574741..4575349 | + | 609 | WP_071776716.1 | hypothetical protein | - |
| QDW51_RS22600 (4576789) | 4576789..4577811 | + | 1023 | WP_001384106.1 | hypothetical protein | - |
| QDW51_RS22605 (4577895) | 4577895..4578767 | + | 873 | WP_096111351.1 | GTPase family protein | - |
| QDW51_RS22610 (4579139) | 4579139..4581985 | + | 2847 | WP_097423229.1 | Ag43/Cah family autotransporter adhesin | - |
| QDW51_RS22615 (4582056) | 4582056..4582289 | + | 234 | WP_001117561.1 | DUF905 family protein | - |
| QDW51_RS22620 (4582389) | 4582389..4583207 | + | 819 | WP_001234706.1 | DUF932 domain-containing protein | - |
| QDW51_RS22625 (4583299) | 4583299..4583784 | + | 486 | WP_000206661.1 | antirestriction protein | - |
| QDW51_RS22630 (4583799) | 4583799..4584275 | + | 477 | WP_001186710.1 | RadC family protein | - |
| QDW51_RS22635 (4584344) | 4584344..4584565 | + | 222 | WP_000692293.1 | DUF987 domain-containing protein | - |
| QDW51_RS22640 (4584579) | 4584579..4585223 | + | 645 | WP_001079776.1 | hypothetical protein | - |
| QDW51_RS22645 (4585273) | 4585273..4585641 | + | 369 | WP_024210939.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QDW51_RS22650 (4585731) | 4585731..4586108 | + | 378 | WP_001094449.1 | TA system toxin CbtA family protein | Toxin Detail |
| QDW51_RS22655 (4586105) | 4586105..4586254 | + | 150 | Protein_4436 | DUF5983 family protein | - |
| QDW51_RS22660 (4586330) | 4586330..4586527 | + | 198 | WP_087891818.1 | DUF957 domain-containing protein | - |
| QDW51_RS22665 (4586612) | 4586612..4587244 | + | 633 | Protein_4438 | DUF4942 domain-containing protein | - |
| QDW51_RS22675 (4588575) | 4588575..4588793 | + | 219 | Protein_4440 | DUF4942 domain-containing protein | - |
| QDW51_RS22680 (4588972) | 4588972..4589724 | + | 753 | WP_282832837.1 | CSS-motif domain-containing protein | - |
| QDW51_RS22685 (4589750) | 4589750..4590963 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| QDW51_RS22690 (4591066) | 4591066..4591713 | + | 648 | WP_282832995.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| QDW51_RS22695 (4592517) | 4592517..4594055 | + | 1539 | WP_001187196.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QDW51_RS22700 (4594421) | 4594421..4595755 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QDW51_RS22705 (4595835) | 4595835..4597982 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QDW51_RS22710 (4598041) | 4598041..4599498 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| QDW51_RS22715 (4599735) | 4599735..4601252 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QDW51_RS22720 (4601371) | 4601371..4601544 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QDW51_RS22725 (4601572) | 4601572..4601868 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QDW51_RS22730 (4602095) | 4602095..4602367 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QDW51_RS22735 (4602379) | 4602379..4602609 | - | 231 | WP_001550470.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QDW51_RS22740 (4602789) | 4602789..4604420 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| QDW51_RS22745 (4604417) | 4604417..4605136 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|