MGE detailed information
MGE type: Prophage MGE length: 53116 bp
Accession: NZ_CP122600 Location: 4686662..4739777 Organism: Escherichia coli strain ETEC6333 Replicon: chromosome
Accession: NZ_CP122600 Location: 4686662..4739777 Organism: Escherichia coli strain ETEC6333 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX83_RS23095 (4681718) | 4681718..4682134 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| QDX83_RS23100 (4682245) | 4682245..4682958 | - | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| QDX83_RS23105 (4683359) | 4683359..4683581 | + | 223 | Protein_4526 | hypothetical protein | - |
| QDX83_RS23110 (4684084) | 4684084..4685277 | - | 1194 | WP_000486950.1 | aromatic amino acid transaminase | - |
| QDX83_RS23115 (4685530) | 4685530..4686609 | - | 1080 | WP_001147321.1 | alanine racemase | - |
| QDX83_RS23120 (4686662) | 4686662..4688077 | - | 1416 | WP_063085440.1 | replicative DNA helicase | - |
| QDX83_RS23125 (4688160) | 4688160..4689143 | + | 984 | WP_001589538.1 | L-threonine 3-dehydrogenase | VF |
| QDX83_RS23130 (4689309) | 4689309..4689551 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| QDX83_RS23135 (4689685) | 4689685..4690722 | - | 1038 | WP_000543828.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| QDX83_RS23140 (4690811) | 4690811..4691908 | + | 1098 | WP_000332271.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QDX83_RS23145 (4691970) | 4691970..4692218 | + | 249 | WP_001217539.1 | DinI-like family protein | - |
| QDX83_RS23150 (4692336) | 4692336..4692623 | - | 288 | WP_272457959.1 | hypothetical protein | - |
| QDX83_RS23155 (4692666) | 4692666..4693706 | - | 1041 | WP_021518237.1 | tail fiber domain-containing protein | - |
| QDX83_RS23160 (4693716) | 4693716..4693997 | - | 282 | WP_282832845.1 | hypothetical protein | - |
| QDX83_RS23165 (4693997) | 4693997..4696378 | - | 2382 | Protein_4538 | prophage tail fiber N-terminal domain-containing protein | - |
| QDX83_RS23170 (4696443) | 4696443..4697042 | - | 600 | WP_117008286.1 | hypothetical protein | VF |
| QDX83_RS23175 (4697110) | 4697110..4700589 | - | 3480 | WP_282832848.1 | host specificity protein J | - |
| QDX83_RS23180 (4700650) | 4700650..4701224 | - | 575 | Protein_4541 | tail assembly protein | - |
| QDX83_RS23185 (4701221) | 4701221..4701964 | - | 744 | WP_282832850.1 | C40 family peptidase | - |
| QDX83_RS23190 (4701970) | 4701970..4702668 | - | 699 | WP_282832997.1 | phage minor tail protein L | - |
| QDX83_RS23195 (4702637) | 4702637..4703005 | - | 369 | WP_282953999.1 | phage tail protein | - |
| QDX83_RS23200 (4703005) | 4703005..4706061 | - | 3057 | WP_282832852.1 | phage tail tape measure protein | - |
| QDX83_RS23205 (4706033) | 4706033..4706362 | - | 330 | WP_272421325.1 | phage tail assembly protein T | - |
| QDX83_RS23210 (4706371) | 4706371..4706757 | - | 387 | WP_001300035.1 | phage minor tail protein G | - |
| QDX83_RS23215 (4706818) | 4706818..4707561 | - | 744 | WP_000211109.1 | phage tail protein | - |
| QDX83_RS23220 (4707573) | 4707573..4707974 | - | 402 | WP_282832854.1 | phage minor tail U family protein | - |
| QDX83_RS23225 (4707971) | 4707971..4708561 | - | 591 | WP_000677119.1 | phage tail protein | - |
| QDX83_RS23230 (4708573) | 4708573..4708848 | - | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| QDX83_RS23235 (4708841) | 4708841..4709164 | - | 324 | WP_001097055.1 | DUF2190 family protein | - |
| QDX83_RS23240 (4709251) | 4709251..4711278 | - | 2028 | WP_282832856.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| QDX83_RS23245 (4711223) | 4711223..4712731 | - | 1509 | WP_000985923.1 | phage portal protein | - |
| QDX83_RS23250 (4712731) | 4712731..4712943 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| QDX83_RS23255 (4712940) | 4712940..4715039 | - | 2100 | WP_000507025.1 | phage terminase large subunit family protein | - |
| QDX83_RS23260 (4715048) | 4715048..4715575 | - | 528 | WP_001389340.1 | DUF1441 family protein | - |
| QDX83_RS23265 (4716018) | 4716018..4716593 | + | 576 | WP_001189672.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| QDX83_RS23270 (4716665) | 4716665..4717042 | - | 378 | WP_063085036.1 | M15 family metallopeptidase | - |
| QDX83_RS23275 (4717045) | 4717045..4717320 | - | 276 | WP_063085037.1 | phage holin family protein | - |
| QDX83_RS23280 (4717310) | 4717310..4717702 | - | 393 | WP_032192285.1 | putative holin | - |
| QDX83_RS23290 (4718653) | 4718653..4719504 | - | 852 | WP_236265347.1 | HTH-type transcriptional activator RhaR | VF |
| QDX83_RS23295 (4719676) | 4719676..4720617 | + | 942 | WP_015987625.1 | hypothetical protein | - |
| QDX83_RS23300 (4720696) | 4720696..4721064 | + | 369 | WP_129110716.1 | hypothetical protein | - |
| QDX83_RS23305 (4721088) | 4721088..4721453 | - | 366 | WP_196042426.1 | antiterminator Q family protein | - |
| QDX83_RS23310 (4721468) | 4721468..4722457 | - | 990 | WP_063085034.1 | DUF968 domain-containing protein | - |
| QDX83_RS23315 (4722465) | 4722465..4723274 | - | 810 | WP_001061378.1 | KilA-N domain-containing protein | - |
| QDX83_RS23320 (4723294) | 4723294..4723683 | - | 390 | WP_000767133.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QDX83_RS23325 (4723680) | 4723680..4724006 | - | 327 | WP_000210187.1 | LexA family transcriptional regulator | - |
| QDX83_RS23330 (4724003) | 4724003..4724656 | - | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| QDX83_RS23335 (4724671) | 4724671..4724754 | - | 84 | Protein_4571 | hypothetical protein | - |
| QDX83_RS23340 (4724751) | 4724751..4725743 | - | 993 | WP_000054957.1 | hypothetical protein | - |
| QDX83_RS23345 (4725700) | 4725700..4725912 | - | 213 | WP_001250270.1 | DUF4222 domain-containing protein | - |
| QDX83_RS23350 (4726088) | 4726088..4726672 | - | 585 | WP_000514174.1 | YmfL family putative regulatory protein | - |
| QDX83_RS23355 (4726700) | 4726700..4726897 | - | 198 | WP_001231956.1 | Cro/CI family transcriptional regulator | - |
| QDX83_RS23360 (4726993) | 4726993..4727646 | + | 654 | WP_000981537.1 | S24 family peptidase | - |
| QDX83_RS23365 (4728104) | 4728104..4728466 | + | 363 | WP_000135682.1 | protein YfdP | - |
| QDX83_RS23370 (4728532) | 4728532..4729356 | + | 825 | WP_097420368.1 | DUF2303 family protein | - |
| QDX83_RS23375 (4729485) | 4729485..4730021 | + | 537 | WP_175286063.1 | 5'-deoxynucleotidase | - |
| QDX83_RS23380 (4730012) | 4730012..4730374 | + | 363 | WP_001242718.1 | phage protein | - |
| QDX83_RS23385 (4730371) | 4730371..4730574 | + | 204 | WP_000111289.1 | hypothetical protein | - |
| QDX83_RS23390 (4730567) | 4730567..4730806 | + | 240 | WP_112023949.1 | hypothetical protein | - |
| QDX83_RS23395 (4730803) | 4730803..4731330 | + | 528 | WP_075843227.1 | ead/Ea22-like family protein | - |
| QDX83_RS23400 (4731332) | 4731332..4731523 | + | 192 | WP_001014290.1 | hypothetical protein | - |
| QDX83_RS23405 (4731526) | 4731526..4731840 | + | 315 | Protein_4585 | DUF551 domain-containing protein | - |
| QDX83_RS23410 (4732087) | 4732087..4732278 | + | 192 | WP_001690200.1 | DUF551 domain-containing protein | - |
| QDX83_RS23415 (4732278) | 4732278..4732850 | + | 573 | WP_001061345.1 | 3'-5' exonuclease | - |
| QDX83_RS23420 (4732887) | 4732887..4733168 | + | 282 | WP_001093917.1 | pyocin activator PrtN family protein | - |
| QDX83_RS23425 (4733215) | 4733215..4733388 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| QDX83_RS23430 (4733428) | 4733428..4733814 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| QDX83_RS23435 (4733844) | 4733844..4734353 | - | 510 | WP_024174200.1 | Panacea domain-containing protein | Antitoxin Detail |
| QDX83_RS23440 (4734670) | 4734670..4734774 | - | 105 | Protein_4592 | tRNA-dihydrouridine synthase | - |
| QDX83_RS23445 (4735137) | 4735137..4736093 | - | 957 | WP_063085441.1 | DUF2713 family protein | - |
| QDX83_RS23450 (4736411) | 4736411..4736926 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| QDX83_RS23455 (4736968) | 4736968..4737177 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| QDX83_RS23460 (4737293) | 4737293..4738618 | - | 1326 | WP_001545103.1 | MATE family efflux transporter DinF | - |
| QDX83_RS23465 (4738691) | 4738691..4739299 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| QDX83_RS23470 (4739409) | 4739409..4739777 | - | 369 | WP_000002913.1 | diacylglycerol kinase | - |
| QDX83_RS23475 (4739948) | 4739948..4742371 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| QDX83_RS23480 (4742526) | 4742526..4743398 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| QDX83_RS23485 (4743411) | 4743411..4743908 | - | 498 | WP_001468913.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|