MGE detailed information
MGE type: Mobilizable plasmid MGE length: 64291 bp
Accession: NZ_CP122595 Location: 1..64291 Organism: Escherichia coli strain ETEC6335 Replicon: plasmid unnamed7
Accession: NZ_CP122595 Location: 1..64291 Organism: Escherichia coli strain ETEC6335 Replicon: plasmid unnamed7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY30_RS27135 (QDY30_27135) | 1..1044 | + | 1044 | Protein_0 | hypothetical protein | VF |
| QDY30_RS27140 (QDY30_27140) | 1083..1445 | + | 363 | WP_282867021.1 | hypothetical protein | - |
| QDY30_RS27145 (QDY30_27155) | 2808..3932 | + | 1125 | WP_000486719.1 | site-specific integrase | - |
| QDY30_RS27150 (QDY30_27160) | 3944..4597 | + | 654 | WP_000572553.1 | hypothetical protein | - |
| QDY30_RS27155 (QDY30_27165) | 4627..4841 | + | 215 | Protein_4 | hypothetical protein | - |
| QDY30_RS27160 (QDY30_27170) | 4882..6090 | - | 1209 | WP_088551906.1 | IS200-IS605 family transposase IS609 | Transposase |
| QDY30_RS27165 (QDY30_27175) | 6177..6395 | + | 219 | Protein_6 | thermonuclease family protein | - |
| QDY30_RS27170 (QDY30_27180) | 6411..6815 | + | 405 | WP_015057153.1 | hypothetical protein | - |
| QDY30_RS27175 (QDY30_27185) | 7179..7766 | + | 588 | WP_015057152.1 | DUF6012 family protein | - |
| QDY30_RS27180 (QDY30_27190) | 7778..9943 | + | 2166 | WP_015057151.1 | type IA DNA topoisomerase | - |
| QDY30_RS27185 (QDY30_27195) | 10012..10218 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| QDY30_RS27190 (QDY30_27200) | 10875..11300 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QDY30_RS27195 (QDY30_27205) | 11297..11647 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QDY30_RS27200 (QDY30_27210) | 11678..13291 | + | 1614 | WP_000080200.1 | IS66 family transposase ISEc23 | Transposase |
| QDY30_RS27205 (QDY30_27215) | 13376..13702 | + | 327 | WP_282867027.1 | hypothetical protein | - |
| QDY30_RS27210 (QDY30_27220) | 13756..17994 | - | 4239 | WP_021538567.1 | hypothetical protein | - |
| QDY30_RS27215 (QDY30_27225) | 17991..18332 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| QDY30_RS27220 (QDY30_27230) | 18662..19141 | + | 480 | WP_001058980.1 | hypothetical protein | - |
| QDY30_RS27225 (QDY30_27235) | 19147..19848 | + | 702 | WP_000280995.1 | StbB family protein | - |
| QDY30_RS27230 (QDY30_27240) | 19895..20494 | + | 600 | WP_000091423.1 | hypothetical protein | - |
| QDY30_RS27235 (QDY30_27245) | 20514..20840 | + | 327 | WP_000206701.1 | hypothetical protein | - |
| QDY30_RS27240 (QDY30_27250) | 20971..21408 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| QDY30_RS27245 (QDY30_27255) | 21433..21615 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| QDY30_RS27250 (QDY30_27260) | 21912..22355 | + | 444 | WP_000068545.1 | hypothetical protein | - |
| QDY30_RS27255 (QDY30_27265) | 22462..22728 | - | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| QDY30_RS27260 (QDY30_27270) | 22948..24156 | - | 1209 | WP_059260046.1 | IS200-IS605 family transposase IS609 | Transposase |
| QDY30_RS27265 (QDY30_27275) | 24181..24288 | + | 108 | Protein_26 | hypothetical protein | - |
| QDY30_RS27270 (QDY30_27280) | 24484..24762 | - | 279 | WP_000545937.1 | hypothetical protein | - |
| QDY30_RS27275 (QDY30_27285) | 25312..25563 | - | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| QDY30_RS27280 (QDY30_27290) | 25553..25813 | - | 261 | WP_000702245.1 | hypothetical protein | Toxin Detail |
| QDY30_RS27285 (QDY30_27295) | 25865..26089 | - | 225 | WP_021538569.1 | hypothetical protein | - |
| QDY30_RS27290 (QDY30_27300) | 26187..26396 | - | 210 | WP_000866037.1 | hypothetical protein | - |
| QDY30_RS27295 (QDY30_27305) | 26437..26760 | - | 324 | WP_000427402.1 | hypothetical protein | - |
| QDY30_RS27300 (QDY30_27310) | 27341..27670 | - | 330 | WP_000855121.1 | hypothetical protein | - |
| QDY30_RS27305 (QDY30_27315) | 28267..28932 | + | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| QDY30_RS27310 (QDY30_27320) | 29006..29290 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| QDY30_RS27315 (QDY30_27325) | 29308..29904 | - | 597 | WP_000125164.1 | ProQ/FINO family protein | - |
| QDY30_RS27320 (QDY30_27330) | 30054..30176 | - | 123 | WP_223202818.1 | Hok/Gef family protein | - |
| QDY30_RS27325 (QDY30_27335) | 30121..30273 | - | 153 | Protein_38 | DUF5431 family protein | - |
| QDY30_RS27330 (QDY30_27340) | 31619..32647 | - | 1029 | WP_001175215.1 | plasmid replication initiator RepA | - |
| QDY30_RS27335 (QDY30_27345) | 33785..34237 | + | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
| QDY30_RS27340 (QDY30_27350) | 34230..34445 | + | 216 | WP_001127357.1 | DUF1187 family protein | - |
| QDY30_RS27345 (QDY30_27355) | 34438..34614 | + | 177 | WP_000753050.1 | hypothetical protein | - |
| QDY30_RS27350 (QDY30_27360) | 34641..35594 | + | 954 | WP_072116679.1 | SPFH domain-containing protein | - |
| QDY30_RS27355 (QDY30_27365) | 35657..36100 | + | 444 | WP_021538571.1 | NfeD family protein | - |
| QDY30_RS27360 (QDY30_27370) | 36104..36274 | + | 171 | WP_000550721.1 | hypothetical protein | - |
| QDY30_RS27365 (QDY30_27375) | 36285..36947 | + | 663 | WP_021538572.1 | hypothetical protein | - |
| QDY30_RS27370 (QDY30_27380) | 37371..37673 | + | 303 | WP_001360345.1 | hypothetical protein | - |
| QDY30_RS27375 (QDY30_27385) | 37670..37927 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| QDY30_RS27380 (QDY30_27390) | 37931..38926 | + | 996 | WP_282867010.1 | hypothetical protein | VF |
| QDY30_RS27385 (QDY30_27395) | 38932..39576 | + | 645 | WP_001310442.1 | hypothetical protein | VF |
| QDY30_RS27390 (QDY30_27400) | 39585..39809 | + | 225 | WP_000713561.1 | EexN family lipoprotein | - |
| QDY30_RS27395 (QDY30_27405) | 40032..40841 | - | 810 | WP_021538574.1 | DUF5710 domain-containing protein | - |
| QDY30_RS27400 (QDY30_27410) | 40889..41344 | + | 456 | WP_282867013.1 | hypothetical protein | - |
| QDY30_RS27405 (QDY30_27415) | 41413..42063 | + | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| QDY30_RS27410 (QDY30_27420) | 42063..42410 | + | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| QDY30_RS27415 (QDY30_27425) | 42430..44001 | + | 1572 | WP_000381443.1 | IS66 family transposase IS679 | Transposase |
| QDY30_RS27420 (QDY30_27430) | 44303..44602 | + | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QDY30_RS27425 (QDY30_27435) | 44605..45840 | + | 1236 | WP_021538576.1 | hypothetical protein | VF |
| QDY30_RS27430 (QDY30_27440) | 45846..46283 | + | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| QDY30_RS27435 (QDY30_27445) | 46402..46800 | + | 399 | WP_001153669.1 | hypothetical protein | - |
| QDY30_RS27440 (QDY30_27450) | 46821..47405 | + | 585 | WP_001177118.1 | Type IV secretion system protein virB1 | VF |
| QDY30_RS27445 (QDY30_27455) | 47405..47695 | + | 291 | WP_000865478.1 | hypothetical protein | - |
| QDY30_RS27450 (QDY30_27460) | 47766..48086 | + | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| QDY30_RS27455 (QDY30_27465) | 48092..50449 | + | 2358 | WP_000548952.1 | VirB4 family type IV secretion system protein | - |
| QDY30_RS27460 (QDY30_27470) | 50615..51349 | + | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| QDY30_RS27465 (QDY30_27475) | 51346..52116 | + | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| QDY30_RS27470 (QDY30_27480) | 52106..53245 | + | 1140 | WP_000790641.1 | Type IV secretion system protein virB10 | VF |
| QDY30_RS27475 (QDY30_27485) | 53264..54319 | + | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| QDY30_RS27480 (QDY30_27490) | 54335..56293 | + | 1959 | WP_000338976.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QDY30_RS27485 (QDY30_27495) | 56344..57987 | + | 1644 | WP_001035593.1 | Outer membrane lipoprotein BfpB | VF |
| QDY30_RS27490 (QDY30_27500) | 58038..59348 | + | 1311 | WP_001360347.1 | type 4b pilus protein PilO2 | - |
| QDY30_RS27495 (QDY30_27505) | 59332..59826 | + | 495 | WP_000912553.1 | hypothetical protein | VF |
| QDY30_RS27500 (QDY30_27510) | 59851..61389 | + | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| QDY30_RS27505 (QDY30_27515) | 61380..62489 | + | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QDY30_RS27510 (QDY30_27520) | 62534..63091 | + | 558 | WP_000095049.1 | type 4 pilus major pilin | - |
| QDY30_RS27515 (QDY30_27525) | 63158..63640 | + | 483 | WP_023226007.1 | hypothetical protein | VF |
| QDY30_RS27520 (QDY30_27530) | 63644..64279 | + | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|