MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 9705 bp
Accession: NZ_CP122588 Location: 4157698..4167402 Organism: Escherichia coli strain ETEC6335 Replicon: chromosome
Accession: NZ_CP122588 Location: 4157698..4167402 Organism: Escherichia coli strain ETEC6335 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY30_RS20325 (4152901) | 4152901..4153260 | - | 360 | WP_089565164.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QDY30_RS20330 (4153273) | 4153273..4154319 | - | 1047 | WP_282865599.1 | DUF968 domain-containing protein | - |
| QDY30_RS20335 (4154321) | 4154321..4154599 | - | 279 | WP_089602482.1 | hypothetical protein | - |
| QDY30_RS20340 (4155058) | 4155058..4155213 | - | 156 | WP_089616915.1 | type I toxin-antitoxin system toxin HokD | - |
| QDY30_RS20345 (4155508) | 4155508..4155900 | - | 393 | WP_219789604.1 | hypothetical protein | - |
| QDY30_RS20350 (4155900) | 4155900..4156430 | - | 531 | WP_151316972.1 | DUF551 domain-containing protein | - |
| QDY30_RS20355 (4156432) | 4156432..4156650 | - | 219 | WP_151316973.1 | DUF4014 family protein | - |
| QDY30_RS20360 (4156745) | 4156745..4156945 | - | 201 | WP_282866826.1 | hypothetical protein | - |
| QDY30_RS20365 (4156932) | 4156932..4157675 | - | 744 | WP_063101778.1 | DUF1627 domain-containing protein | - |
| QDY30_RS20370 (4157698) | 4157698..4158444 | - | 747 | WP_000788975.1 | ATP-binding protein | - |
| QDY30_RS20375 (4158451) | 4158451..4159398 | - | 948 | WP_063082131.1 | helix-turn-helix domain-containing protein | - |
| QDY30_RS20380 (4159422) | 4159422..4159847 | - | 426 | WP_000693861.1 | toxin YdaT family protein | - |
| QDY30_RS20385 (4159844) | 4159844..4160146 | - | 303 | WP_000172735.1 | transcriptional regulator | - |
| QDY30_RS20390 (4160244) | 4160244..4160615 | + | 372 | WP_001169685.1 | hypothetical protein | - |
| QDY30_RS20395 (4160636) | 4160636..4160827 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| QDY30_RS20400 (4160829) | 4160829..4161107 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDY30_RS20405 (4161406) | 4161406..4161612 | + | 207 | WP_001171935.1 | hypothetical protein | - |
| QDY30_RS20410 (4161637) | 4161637..4162275 | + | 639 | WP_033813300.1 | hypothetical protein | - |
| QDY30_RS20415 (4162276) | 4162276..4162485 | - | 210 | WP_033813301.1 | hypothetical protein | - |
| QDY30_RS20420 (4163054) | 4163054..4163242 | + | 189 | WP_089565158.1 | cell division inhibition protein DicB | - |
| QDY30_RS20425 (4163239) | 4163239..4163442 | + | 204 | WP_053289477.1 | DUF1482 family protein | - |
| QDY30_RS20430 (4163523) | 4163523..4166006 | + | 2484 | WP_096937579.1 | exonuclease | - |
| QDY30_RS20435 (4166070) | 4166070..4166318 | + | 249 | WP_064225366.1 | excisionase | - |
| QDY30_RS20440 (4166296) | 4166296..4167427 | + | 1132 | Protein_4002 | hypothetical protein ; Integrase | Integrase |
| QDY30_RS20445 (4167473) | 4167473..4167595 | - | 123 | Protein_4003 | OmpW family outer membrane protein | - |
| QDY30_RS20450 (4167586) | 4167586..4169661 | + | 2076 | Protein_4004 | outer membrane usher protein | - |
| QDY30_RS20455 (4169675) | 4169675..4170223 | + | 549 | WP_175087181.1 | fimbrial protein | - |
| QDY30_RS20460 (4170238) | 4170238..4170843 | + | 606 | WP_044189146.1 | fimbrial protein | - |
| QDY30_RS20465 (4170864) | 4170864..4171454 | + | 591 | WP_000882562.1 | fimbrial-like protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|