MGE detailed information
MGE type: Prophage MGE length: 55296 bp
Accession: NZ_CP122588 Location: 2623330..2678625 Organism: Escherichia coli strain ETEC6335 Replicon: chromosome
Accession: NZ_CP122588 Location: 2623330..2678625 Organism: Escherichia coli strain ETEC6335 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY30_RS12755 (2621082) | 2621082..2622215 | + | 1134 | WP_000837923.1 | porin OmpN | - |
| QDY30_RS12760 (2622356) | 2622356..2622790 | + | 435 | WP_001295593.1 | universal stress protein UspF | - |
| QDY30_RS12765 (2623330) | 2623330..2623893 | - | 564 | WP_064226432.1 | DUF4376 domain-containing protein | - |
| QDY30_RS12770 (2623893) | 2623893..2625887 | - | 1995 | WP_149449501.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QDY30_RS12775 (2625911) | 2625911..2626456 | - | 546 | WP_000902852.1 | tail fiber assembly protein | - |
| QDY30_RS12780 (2626459) | 2626459..2627976 | - | 1518 | WP_169000720.1 | phage tail protein | - |
| QDY30_RS12785 (2627973) | 2627973..2628599 | - | 627 | WP_001199731.1 | hypothetical protein | - |
| QDY30_RS12790 (2628583) | 2628583..2629809 | - | 1227 | WP_001421090.1 | baseplate J/gp47 family protein | - |
| QDY30_RS12795 (2629831) | 2629831..2630379 | + | 549 | WP_001421089.1 | hypothetical protein | - |
| QDY30_RS12800 (2630398) | 2630398..2630862 | + | 465 | WP_157914702.1 | hypothetical protein | - |
| QDY30_RS12805 (2631142) | 2631142..2631705 | + | 564 | WP_120150465.1 | antA/AntB antirepressor family protein | - |
| QDY30_RS12810 (2631681) | 2631681..2632028 | - | 348 | WP_001261328.1 | hypothetical protein | - |
| QDY30_RS12815 (2632482) | 2632482..2633195 | - | 714 | WP_000063624.1 | hypothetical protein | - |
| QDY30_RS12820 (2633195) | 2633195..2634202 | - | 1008 | WP_001271164.1 | hypothetical protein | - |
| QDY30_RS12825 (2634202) | 2634202..2634468 | - | 267 | WP_120150692.1 | hypothetical protein | - |
| QDY30_RS12830 (2634465) | 2634465..2635133 | - | 669 | WP_000056324.1 | hypothetical protein | - |
| QDY30_RS12835 (2635137) | 2635137..2637125 | - | 1989 | WP_247779618.1 | transglycosylase SLT domain-containing protein | - |
| QDY30_RS12840 (2637189) | 2637189..2637806 | - | 618 | WP_282834691.1 | hypothetical protein | - |
| QDY30_RS12845 (2637803) | 2637803..2638234 | - | 432 | WP_000613368.1 | hypothetical protein | - |
| QDY30_RS12850 (2638258) | 2638258..2639595 | - | 1338 | WP_282834693.1 | hypothetical protein | - |
| QDY30_RS12855 (2639595) | 2639595..2640539 | - | 945 | WP_001139503.1 | hypothetical protein | - |
| QDY30_RS12860 (2640526) | 2640526..2640966 | - | 441 | WP_000762305.1 | hypothetical protein | - |
| QDY30_RS12865 (2640963) | 2640963..2641403 | - | 441 | WP_000175376.1 | hypothetical protein | - |
| QDY30_RS12870 (2641403) | 2641403..2641873 | - | 471 | WP_000780863.1 | hypothetical protein | - |
| QDY30_RS12875 (2641931) | 2641931..2642959 | - | 1029 | WP_001272367.1 | hypothetical protein | - |
| QDY30_RS12880 (2642974) | 2642974..2643591 | - | 618 | WP_000763616.1 | hypothetical protein | - |
| QDY30_RS12885 (2643584) | 2643584..2644906 | - | 1323 | WP_213763235.1 | DUF2213 domain-containing protein | - |
| QDY30_RS12890 (2644887) | 2644887..2645720 | - | 834 | WP_001018384.1 | hypothetical protein | - |
| QDY30_RS12895 (2645665) | 2645665..2647101 | - | 1437 | WP_001774832.1 | DUF1073 domain-containing protein | - |
| QDY30_RS12900 (2647120) | 2647120..2648448 | - | 1329 | WP_000021160.1 | terminase | - |
| QDY30_RS12905 (2648438) | 2648438..2649529 | - | 1092 | WP_000089452.1 | terminase small subunit | - |
| QDY30_RS12910 (2649533) | 2649533..2649784 | - | 252 | WP_000613572.1 | hypothetical protein | - |
| QDY30_RS12915 (2650281) | 2650281..2650487 | - | 207 | WP_001208684.1 | Rz1 family lipoprotein | - |
| QDY30_RS12920 (2650710) | 2650710..2650844 | - | 135 | WP_000622439.1 | hypothetical protein | - |
| QDY30_RS12925 (2650859) | 2650859..2651428 | - | 570 | WP_001056890.1 | phage antirepressor N-terminal domain-containing protein | - |
| QDY30_RS12930 (2651640) | 2651640..2652017 | - | 378 | WP_000014555.1 | M15 family metallopeptidase | - |
| QDY30_RS12935 (2652020) | 2652020..2652295 | - | 276 | WP_000950565.1 | phage holin family protein | - |
| QDY30_RS12940 (2652285) | 2652285..2652677 | - | 393 | WP_001294583.1 | putative holin | - |
| QDY30_RS12945 (2652735) | 2652735..2653160 | - | 426 | WP_000823297.1 | subtilase family AB5 toxin binding subunit | - |
| QDY30_RS12950 (2653228) | 2653228..2653953 | - | 726 | WP_001774831.1 | enterotoxin A family protein | - |
| QDY30_RS12955 (2654341) | 2654341..2654883 | - | 543 | WP_000640111.1 | DUF1133 family protein | - |
| QDY30_RS12960 (2654880) | 2654880..2655170 | - | 291 | WP_000247765.1 | DUF1364 domain-containing protein | - |
| QDY30_RS12965 (2655170) | 2655170..2655769 | - | 600 | WP_000940341.1 | DUF1367 family protein | - |
| QDY30_RS12970 (2655925) | 2655925..2656002 | - | 78 | Protein_2543 | hypothetical protein | - |
| QDY30_RS12975 (2656281) | 2656281..2656436 | - | 156 | WP_000813269.1 | type I toxin-antitoxin system toxin HokD | - |
| QDY30_RS12980 (2656834) | 2656834..2657352 | - | 519 | WP_000013905.1 | hypothetical protein | - |
| QDY30_RS12985 (2657345) | 2657345..2657659 | - | 315 | WP_000691548.1 | STAS-like domain-containing protein | - |
| QDY30_RS12990 (2657661) | 2657661..2658791 | - | 1131 | WP_223718946.1 | ATP-binding protein | - |
| QDY30_RS12995 (2659064) | 2659064..2659525 | - | 462 | WP_001151128.1 | DUF977 family protein | - |
| QDY30_RS13000 (2659541) | 2659541..2660302 | - | 762 | WP_000450665.1 | DUF1627 domain-containing protein | - |
| QDY30_RS13005 (2660325) | 2660325..2661071 | - | 747 | WP_000788978.1 | ATP-binding protein | - |
| QDY30_RS13010 (2661078) | 2661078..2661386 | - | 309 | Protein_2551 | hypothetical protein | - |
| QDY30_RS13015 (2661768) | 2661768..2662208 | - | 441 | Protein_2552 | hypothetical protein | - |
| QDY30_RS13020 (2662286) | 2662286..2662708 | - | 423 | WP_000702031.1 | toxin YdaT family protein | - |
| QDY30_RS13025 (2662692) | 2662692..2662967 | - | 276 | WP_000171138.1 | YdaS family helix-turn-helix protein | - |
| QDY30_RS13030 (2663072) | 2663072..2663535 | + | 464 | Protein_2555 | helix-turn-helix domain-containing protein | - |
| QDY30_RS13035 (2663776) | 2663776..2663928 | + | 153 | WP_000379561.1 | DUF1391 family protein | - |
| QDY30_RS13040 (2664349) | 2664349..2664570 | + | 222 | WP_000560223.1 | killing protein KilR | - |
| QDY30_RS13045 (2664570) | 2664570..2664740 | + | 171 | WP_065336296.1 | YdaE family protein | - |
| QDY30_RS13050 (2664815) | 2664815..2665090 | + | 276 | WP_001372690.1 | hypothetical protein | - |
| QDY30_RS13055 (2665190) | 2665190..2668312 | + | 3123 | WP_000105090.1 | exodeoxyribonuclease VIII | - |
| QDY30_RS13060 (2668324) | 2668324..2669376 | + | 1053 | WP_001004412.1 | RecT family recombinase | - |
| QDY30_RS13065 (2669440) | 2669440..2669634 | + | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| - (2669633) | 2669633..2669811 | - | 179 | NuclAT_1 | - | Antitoxin Detail |
| - (2669633) | 2669633..2669811 | - | 179 | NuclAT_1 | - | Antitoxin Detail |
| - (2669633) | 2669633..2669811 | - | 179 | NuclAT_1 | - | Antitoxin Detail |
| - (2669633) | 2669633..2669811 | - | 179 | NuclAT_1 | - | Antitoxin Detail |
| QDY30_RS13070 (2669627) | 2669627..2669815 | + | 189 | WP_001372676.1 | DUF1187 family protein | - |
| QDY30_RS13075 (2669915) | 2669915..2670130 | + | 216 | WP_000079604.1 | excisionase XisR | - |
| QDY30_RS13080 (2670132) | 2670132..2671367 | + | 1236 | WP_024168543.1 | site-specific integrase | - |
| QDY30_RS13085 (2671419) | 2671419..2672354 | + | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| QDY30_RS13090 (2672483) | 2672483..2673856 | - | 1374 | WP_000123733.1 | ATP-dependent RNA helicase DbpA | - |
| QDY30_RS13095 (2673886) | 2673886..2674059 | - | 174 | WP_001296046.1 | protein YnaL | - |
| QDY30_RS13100 (2674334) | 2674334..2675317 | - | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| QDY30_RS13105 (2675331) | 2675331..2675378 | - | 48 | WP_211180494.1 | protein YnaN | - |
| QDY30_RS13110 (2675571) | 2675571..2676803 | + | 1233 | WP_000628065.1 | diguanylate cyclase DgcM | - |
| QDY30_RS13115 (2676824) | 2676824..2677387 | - | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| QDY30_RS13120 (2677717) | 2677717..2678625 | - | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| QDY30_RS13125 (2678801) | 2678801..2680111 | + | 1311 | WP_000444939.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| QDY30_RS13130 (2680111) | 2680111..2681556 | + | 1446 | WP_175087133.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| QDY30_RS13135 (2681593) | 2681593..2683119 | + | 1527 | WP_000062967.1 | p-aminobenzoyl-glutamate transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|