MGE detailed information
MGE type: Genomic_island MGE length: 19229 bp
Accession: NZ_CP122588 Location: 1233525..1252753 Organism: Escherichia coli strain ETEC6335 Replicon: chromosome
Accession: NZ_CP122588 Location: 1233525..1252753 Organism: Escherichia coli strain ETEC6335 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY30_RS06015 (1228572) | 1228572..1229549 | - | 978 | WP_001307962.1 | glutarate dioxygenase GlaH | - |
| QDY30_RS06020 (1229886) | 1229886..1232138 | - | 2253 | WP_023308229.1 | alpha-amylase family glycosyl hydrolase | - |
| QDY30_RS06030 (1233525) | 1233525..1234919 | + | 1395 | WP_023308228.1 | DUF5507 domain-containing protein | - |
| QDY30_RS06035 (1235337) | 1235337..1235516 | + | 180 | WP_282866763.1 | DNA invertase | - |
| QDY30_RS06040 (1235671) | 1235671..1235790 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| QDY30_RS06045 (1235855) | 1235855..1240435 | + | 4581 | WP_175087255.1 | hypothetical protein | VF |
| QDY30_RS06050 (1240753) | 1240753..1241073 | - | 321 | WP_175087257.1 | TA system toxin CbtA family protein | Toxin Detail |
| QDY30_RS06055 (1241110) | 1241110..1241433 | - | 324 | WP_175087259.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QDY30_RS06060 (1241466) | 1241466..1241936 | - | 471 | WP_175087261.1 | DNA repair protein RadC | - |
| QDY30_RS06065 (1242006) | 1242006..1242824 | - | 819 | WP_175087262.1 | DUF932 domain-containing protein | - |
| QDY30_RS06070 (1243227) | 1243227..1243898 | + | 672 | WP_175087264.1 | inovirus Gp2 family protein | - |
| QDY30_RS06075 (1244213) | 1244213..1245625 | + | 1413 | WP_282866286.1 | YfjI family protein | - |
| QDY30_RS06080 (1245890) | 1245890..1246168 | + | 279 | WP_077902735.1 | helix-turn-helix transcriptional regulator | - |
| QDY30_RS06085 (1246265) | 1246265..1246984 | - | 720 | WP_175087268.1 | hypothetical protein | - |
| QDY30_RS06090 (1247061) | 1247061..1247531 | - | 471 | WP_052957864.1 | hypothetical protein | - |
| QDY30_RS06095 (1247594) | 1247594..1248310 | - | 717 | WP_072271731.1 | WYL domain-containing protein | - |
| QDY30_RS06100 (1248546) | 1248546..1249430 | - | 885 | WP_046081133.1 | 50S ribosome-binding GTPase | - |
| QDY30_RS06105 (1249593) | 1249593..1249790 | - | 198 | WP_046081132.1 | AlpA family phage regulatory protein | - |
| QDY30_RS06110 (1249915) | 1249915..1250637 | + | 723 | WP_046081131.1 | hypothetical protein | - |
| QDY30_RS06115 (1251464) | 1251464..1252030 | + | 567 | WP_086217640.1 | hypothetical protein | - |
| QDY30_RS06120 (1252306) | 1252306..1252732 | + | 427 | Protein_1198 | integrase arm-type DNA-binding domain-containing protein | - |
| QDY30_RS06125 (1252742) | 1252742..1253983 | - | 1242 | WP_086217641.1 | integrase | - |
| QDY30_RS06135 (1254764) | 1254764..1255246 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| QDY30_RS06140 (1255417) | 1255417..1255854 | + | 438 | WP_001341638.1 | type II toxin-antitoxin system toxin RatA | - |
| QDY30_RS06145 (1255844) | 1255844..1256134 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| QDY30_RS06150 (1256196) | 1256196..1256537 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|