MGE detailed information
MGE type: Conjugative plasmid MGE length: 100034 bp
Accession: NZ_CP122583 Location: 1..100034 Organism: Klebsiella pneumoniae strain NCRE-61 Replicon: plasmid pNCRE-61-100.0
Accession: NZ_CP122583 Location: 1..100034 Organism: Klebsiella pneumoniae strain NCRE-61 Replicon: plasmid pNCRE-61-100.0
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDV36_RS03140 (QDV36_03135) | 19..894 | + | 876 | WP_004098982.1 | replication initiation protein | - |
| QDV36_RS03145 (QDV36_03140) | 1519..2145 | + | 627 | WP_004197649.1 | hypothetical protein | VF |
| QDV36_RS03150 (QDV36_03145) | 2142..2444 | + | 303 | WP_004197636.1 | hypothetical protein | - |
| QDV36_RS03155 (QDV36_03150) | 2892..3686 | - | 795 | WP_004197635.1 | site-specific integrase | - |
| QDV36_RS03160 (QDV36_03155) | 3884..4900 | - | 1017 | WP_017899884.1 | hypothetical protein | - |
| QDV36_RS03165 (QDV36_03160) | 4911..5225 | - | 315 | WP_053389906.1 | hypothetical protein | - |
| QDV36_RS03170 (QDV36_03165) | 5252..5647 | - | 396 | WP_017899885.1 | hypothetical protein | - |
| QDV36_RS03175 (QDV36_03170) | 5816..6121 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QDV36_RS03180 (QDV36_03175) | 6123..6341 | - | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QDV36_RS03185 (QDV36_03180) | 6895..7584 | + | 690 | WP_004193995.1 | hypothetical protein | - |
| QDV36_RS03190 (QDV36_03185) | 7616..8305 | - | 690 | WP_020315560.1 | RES family NAD+ phosphorylase | - |
| QDV36_RS03195 (QDV36_03190) | 8742..8990 | + | 249 | WP_000272716.1 | hypothetical protein | - |
| QDV36_RS03200 (QDV36_03195) | 8987..9559 | + | 573 | WP_020805590.1 | hypothetical protein | - |
| QDV36_RS03205 (QDV36_03200) | 9590..10084 | + | 495 | WP_020805591.1 | hypothetical protein | - |
| QDV36_RS03210 (QDV36_03205) | 10128..10496 | + | 369 | WP_004197807.1 | hypothetical protein | - |
| QDV36_RS03215 (QDV36_03210) | 10530..10733 | + | 204 | WP_004197808.1 | HHA domain-containing protein | - |
| QDV36_RS03220 (QDV36_03215) | 10747..10950 | + | 204 | WP_004197809.1 | hypothetical protein | - |
| QDV36_RS03225 (QDV36_03220) | 11132..12136 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| QDV36_RS03230 (QDV36_03225) | 12215..12913 | - | 699 | Protein_18 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| QDV36_RS03235 (QDV36_03230) | 12948..13916 | + | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| QDV36_RS03240 (QDV36_03235) | 13973..16246 | - | 2274 | Protein_20 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| QDV36_RS03245 (QDV36_03240) | 16321..16611 | + | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| QDV36_RS03250 (QDV36_03245) | 16608..17009 | + | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| QDV36_RS03255 (QDV36_03250) | 16999..17355 | + | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| QDV36_RS03260 (QDV36_03255) | 17610..17936 | + | 327 | WP_003100858.1 | hypothetical protein | - |
| QDV36_RS03265 (QDV36_03260) | 17933..18433 | + | 501 | WP_003100856.1 | hypothetical protein | - |
| QDV36_RS03270 (QDV36_03265) | 18430..18801 | + | 372 | WP_003100853.1 | hypothetical protein | - |
| QDV36_RS03275 (QDV36_03270) | 18795..19241 | + | 447 | Protein_27 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| QDV36_RS03280 (QDV36_03275) | 19305..20009 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QDV36_RS03285 (QDV36_03280) | 20061..20195 | - | 135 | Protein_29 | dihydropteroate synthase | - |
| QDV36_RS03290 (QDV36_03285) | 20189..20524 | - | 336 | WP_052238321.1 | SMR family transporter | - |
| QDV36_RS03295 (QDV36_03290) | 20417..20782 | + | 366 | WP_025999322.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| QDV36_RS03300 (QDV36_03295) | 20786..21661 | - | 876 | WP_279967705.1 | LysR family transcriptional regulator AmpR | - |
| QDV36_RS03305 (QDV36_03300) | 21772..22911 | + | 1140 | WP_004236386.1 | Beta-lactamase | ARG |
| QDV36_RS03310 (QDV36_03305) | 23106..23927 | + | 822 | WP_013214003.1 | hypothetical protein | - |
| QDV36_RS03315 (QDV36_03310) | 23885..24073 | + | 189 | Protein_35 | LacI family transcriptional regulator | - |
| QDV36_RS03320 (QDV36_03315) | 24262..24492 | - | 231 | WP_004193241.1 | phage shock protein PspD | - |
| QDV36_RS03325 (QDV36_03320) | 24501..24860 | - | 360 | WP_004193243.1 | envelope stress response membrane protein PspC | - |
| QDV36_RS03330 (QDV36_03325) | 24860..25084 | - | 225 | WP_004193245.1 | envelope stress response membrane protein PspB | - |
| QDV36_RS03335 (QDV36_03330) | 25139..25807 | - | 669 | WP_003020532.1 | phage shock protein PspA | - |
| QDV36_RS03340 (QDV36_03335) | 25963..26952 | + | 990 | WP_017900991.1 | Psp operon transcriptional activator | VF |
| QDV36_RS03345 (QDV36_03340) | 27035..27679 | + | 645 | WP_017900990.1 | Pentapeptide repeat protein | ARG |
| QDV36_RS03350 (QDV36_03345) | 27775..28683 | - | 909 | WP_004193260.1 | putative oxidoreductase YghA | VF |
| QDV36_RS03355 (QDV36_03350) | 28860..29375 | - | 516 | WP_017900989.1 | 2-oxo-tetronate isomerase | - |
| QDV36_RS03360 (QDV36_03355) | 29386..29832 | - | 447 | WP_004193264.1 | DUF421 domain-containing protein | - |
| QDV36_RS03365 (QDV36_03360) | 29842..30345 | - | 504 | WP_004193267.1 | hypothetical protein | - |
| QDV36_RS03370 (QDV36_03365) | 30477..30869 | + | 393 | WP_004193269.1 | YdeI family stress tolerance OB fold protein | - |
| QDV36_RS03375 (QDV36_03370) | 31170..32813 | + | 1644 | WP_004193272.1 | ABC transporter substrate-binding protein SapA | - |
| QDV36_RS03380 (QDV36_03375) | 32810..33568 | + | 759 | Protein_48 | putrescine ABC transporter permease SapB | - |
| QDV36_RS03385 (QDV36_03380) | 33611..34315 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QDV36_RS03390 (QDV36_03385) | 35633..36508 | - | 876 | WP_072101968.1 | incFII family plasmid replication initiator RepA | - |
| QDV36_RS03395 (QDV36_03390) | 36806..37063 | - | 258 | WP_015344940.1 | replication regulatory protein RepA | - |
| QDV36_RS03400 (QDV36_03395) | 37195..37746 | - | 552 | WP_015344941.1 | Cardiolipin synthase A | VF |
| QDV36_RS03405 (QDV36_03400) | 37850..38158 | - | 309 | WP_004152383.1 | hypothetical protein | - |
| QDV36_RS03410 (QDV36_03405) | 38155..38805 | - | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| QDV36_RS03415 (QDV36_03410) | 38861..39505 | - | 645 | WP_004153014.1 | hypothetical protein | - |
| QDV36_RS03420 (QDV36_03415) | 39555..40157 | - | 603 | WP_013023836.1 | PIN domain-containing protein | - |
| QDV36_RS03425 (QDV36_03420) | 40318..40911 | - | 594 | WP_015344942.1 | fertility inhibition protein FinO | - |
| QDV36_RS03430 (QDV36_03425) | 40983..41708 | - | 726 | WP_015344943.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| QDV36_RS03435 (QDV36_03430) | 41752..47013 | - | 5262 | WP_064291677.1 | Multifunctional conjugation protein TraI | Relaxase |
| QDV36_RS03440 (QDV36_03435) | 47013..49325 | - | 2313 | WP_069985711.1 | type IV conjugative transfer system coupling protein TraD | - |
| QDV36_RS03445 (QDV36_03440) | 49454..50143 | - | 690 | WP_072101983.1 | hypothetical protein | - |
| QDV36_RS03450 (QDV36_03445) | 50336..51067 | - | 732 | WP_004152629.1 | conjugal transfer complement resistance protein TraT | - |
| QDV36_RS03455 (QDV36_03450) | 51253..51786 | - | 534 | WP_014343486.1 | conjugal transfer protein TraS | - |
| QDV36_RS03460 (QDV36_03455) | 51789..54638 | - | 2850 | WP_013609534.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDV36_RS03465 (QDV36_03460) | 54638..56017 | - | 1380 | WP_014343487.1 | conjugal transfer pilus assembly protein TraH | - |
| QDV36_RS03470 (QDV36_03465) | 55995..56438 | - | 444 | WP_004194305.1 | F-type conjugal transfer protein TrbF | - |
| QDV36_RS03475 (QDV36_03470) | 56484..57041 | - | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDV36_RS03480 (QDV36_03475) | 57013..57252 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QDV36_RS03485 (QDV36_03480) | 57263..58015 | - | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDV36_RS03490 (QDV36_03485) | 58036..58362 | - | 327 | WP_004152676.1 | hypothetical protein | - |
| QDV36_RS03495 (QDV36_03490) | 58375..58623 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| QDV36_RS03500 (QDV36_03495) | 58601..58855 | - | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| QDV36_RS03505 (QDV36_03500) | 58887..60842 | - | 1956 | WP_030003482.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDV36_RS03510 (QDV36_03505) | 60901..61539 | - | 639 | WP_069985712.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDV36_RS03515 (QDV36_03510) | 61552..62541 | - | 990 | WP_029497420.1 | conjugal transfer pilus assembly protein TraU | - |
| QDV36_RS03520 (QDV36_03515) | 62538..62939 | - | 402 | WP_004194979.1 | hypothetical protein | - |
| QDV36_RS03525 (QDV36_03520) | 62974..63609 | - | 636 | WP_029497419.1 | type-F conjugative transfer system protein TraW | - |
| QDV36_RS03530 (QDV36_03525) | 63609..63998 | - | 390 | WP_004167468.1 | type-F conjugative transfer system protein TrbI | - |
| QDV36_RS03535 (QDV36_03530) | 63998..66637 | - | 2640 | WP_013214024.1 | type IV secretion system protein TraC | - |
| QDV36_RS03540 (QDV36_03535) | 66709..67107 | - | 399 | WP_023179972.1 | hypothetical protein | - |
| QDV36_RS03545 (QDV36_03540) | 67485..67889 | - | 405 | WP_004197817.1 | hypothetical protein | - |
| QDV36_RS03550 (QDV36_03545) | 67956..68267 | - | 312 | WP_029497417.1 | hypothetical protein | - |
| QDV36_RS03555 (QDV36_03550) | 68268..68486 | - | 219 | WP_004195468.1 | hypothetical protein | - |
| QDV36_RS03560 (QDV36_03555) | 68809..69393 | - | 585 | WP_032440547.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QDV36_RS03565 (QDV36_03560) | 69466..70890 | - | 1425 | WP_004194260.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDV36_RS03570 (QDV36_03565) | 70890..71630 | - | 741 | WP_013023821.1 | type-F conjugative transfer system secretin TraK | - |
| QDV36_RS03575 (QDV36_03570) | 71617..72183 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| QDV36_RS03580 (QDV36_03575) | 72203..72508 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| QDV36_RS03585 (QDV36_03580) | 72522..72890 | - | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| QDV36_RS03590 (QDV36_03585) | 72959..73159 | - | 201 | WP_004194116.1 | TraY domain-containing protein | - |
| QDV36_RS03595 (QDV36_03590) | 73245..73946 | - | 702 | WP_004194113.1 | hypothetical protein | - |
| QDV36_RS03600 (QDV36_03595) | 74176..74568 | - | 393 | WP_004194114.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDV36_RS03605 (QDV36_03600) | 75000..75485 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| QDV36_RS03610 (QDV36_03605) | 75518..75847 | - | 330 | WP_047066474.1 | DUF5983 family protein | - |
| QDV36_RS03615 (QDV36_03610) | 75880..76701 | - | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| QDV36_RS03620 (QDV36_03615) | 77531..77944 | - | 414 | WP_023287139.1 | helix-turn-helix domain-containing protein | - |
| QDV36_RS03625 (QDV36_03620) | 77945..78223 | - | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| QDV36_RS03630 (QDV36_03625) | 78213..78533 | - | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDV36_RS03635 (QDV36_03630) | 78614..78838 | - | 225 | WP_014343499.1 | hypothetical protein | - |
| QDV36_RS03640 (QDV36_03635) | 78849..79061 | - | 213 | WP_019706020.1 | hypothetical protein | - |
| QDV36_RS03645 (QDV36_03640) | 79154..80134 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| QDV36_RS03650 (QDV36_03645) | 80284..80553 | - | 270 | Protein_102 | hypothetical protein | - |
| QDV36_RS03655 (QDV36_03650) | 80609..80935 | - | 327 | WP_001568059.1 | hypothetical protein | - |
| QDV36_RS03660 (QDV36_03655) | 80932..81660 | - | 729 | WP_048266274.1 | plasmid SOS inhibition protein A | - |
| QDV36_RS03665 (QDV36_03660) | 81657..82088 | - | 432 | WP_001568057.1 | conjugation system SOS inhibitor PsiB | - |
| QDV36_RS03670 (QDV36_03665) | 82133..84190 | - | 2058 | WP_023287107.1 | ParB/RepB/Spo0J family partition protein | - |
| QDV36_RS03675 (QDV36_03670) | 84260..84508 | - | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| QDV36_RS03680 (QDV36_03675) | 84557..85099 | - | 543 | WP_023280871.1 | single-stranded DNA-binding protein | - |
| QDV36_RS03685 (QDV36_03680) | 85930..86493 | - | 564 | WP_020312297.1 | methyltransferase | - |
| QDV36_RS03690 (QDV36_03685) | 86541..87896 | - | 1356 | WP_231828917.1 | DUF3560 domain-containing protein | - |
| QDV36_RS03695 (QDV36_03690) | 87948..88178 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| QDV36_RS03700 (QDV36_03695) | 88270..88497 | - | 228 | WP_231828918.1 | hypothetical protein | - |
| QDV36_RS03705 (QDV36_03700) | 89177..89497 | - | 321 | WP_001568049.1 | hypothetical protein | - |
| QDV36_RS03710 (QDV36_03705) | 89532..89786 | - | 255 | WP_231828919.1 | DNA polymerase III subunit theta | - |
| QDV36_RS03715 (QDV36_03710) | 89974..90165 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| QDV36_RS03720 (QDV36_03715) | 90208..90714 | - | 507 | WP_110096630.1 | antirestriction protein ArdA | - |
| QDV36_RS03725 (QDV36_03720) | 90757..91185 | - | 429 | WP_004152356.1 | antirestriction protein | - |
| QDV36_RS03730 (QDV36_03725) | 91866..92633 | - | 768 | WP_121526134.1 | hypothetical protein | - |
| QDV36_RS03735 (QDV36_03730) | 92687..93106 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| QDV36_RS03740 (QDV36_03735) | 93116..93337 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| QDV36_RS03745 (QDV36_03740) | 93337..94038 | - | 702 | WP_001568041.1 | DNA methylase | - |
| QDV36_RS03750 (QDV36_03745) | 94110..94279 | - | 170 | Protein_122 | hypothetical protein | - |
| QDV36_RS03755 (QDV36_03750) | 94475..94705 | - | 231 | WP_040245863.1 | hypothetical protein | - |
| QDV36_RS03760 (QDV36_03755) | 94768..95439 | - | 672 | WP_001568039.1 | plasmid partitioning/stability family protein | - |
| QDV36_RS03765 (QDV36_03760) | 95442..96413 | - | 972 | WP_169517708.1 | plasmid segregation protein ParM | - |
| QDV36_RS03770 (QDV36_03765) | 96647..97078 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QDV36_RS03775 (QDV36_03770) | 97078..98349 | + | 1272 | WP_016162068.1 | Y-family DNA polymerase | - |
| QDV36_RS03780 (QDV36_03775) | 98558..99670 | - | 1113 | WP_040217455.1 | IS200-IS605 family transposase ISEc42 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|