MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 54392 bp
Accession: NZ_CP122520 Location: 1..54392 Organism: Escherichia coli strain MY1-8 Replicon: plasmid pSCMY3
Accession: NZ_CP122520 Location: 1..54392 Organism: Escherichia coli strain MY1-8 Replicon: plasmid pSCMY3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QCL60_RS24195 (QCL60_24190) | 1..1560 | + | 1560 | WP_103859199.1 | putative ABC transporter ATP-binding protein YheS | VF |
| QCL60_RS24200 (QCL60_24195) | 1649..2230 | + | 582 | Protein_1 | Tn3 family transposase | - |
| QCL60_RS24205 (QCL60_24200) | 2288..2530 | + | 243 | WP_000844627.1 | transposase | - |
| QCL60_RS24210 (QCL60_24205) | 2562..3197 | - | 636 | WP_039045916.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QCL60_RS24215 (QCL60_24210) | 3303..4502 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| QCL60_RS24220 (QCL60_24215) | 4469..4657 | - | 189 | Protein_5 | IS91 family transposase | - |
| QCL60_RS24225 (QCL60_24220) | 4769..5074 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| QCL60_RS24230 (QCL60_24225) | 5102..6316 | - | 1215 | WP_058657119.1 | Bicyclomycin resistance protein | ARG |
| QCL60_RS24235 (QCL60_24230) | 6533..7417 | - | 885 | WP_012728215.1 | DUF3363 domain-containing protein | - |
| QCL60_RS24240 (QCL60_24235) | 7448..8941 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| QCL60_RS24245 (QCL60_24240) | 9280..10437 | - | 1158 | WP_094309310.1 | Flavin-dependent monooxygenase | ARG |
| QCL60_RS24250 (QCL60_24245) | 10427..11344 | - | 918 | WP_094309312.1 | macrolide hydrolase EstT | - |
| QCL60_RS24255 (QCL60_24250) | 11619..12323 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QCL60_RS24260 (QCL60_24255) | 12335..13147 | - | 813 | WP_065799592.1 | hypothetical protein | ARG |
| QCL60_RS24265 (QCL60_24260) | 13232..14070 | - | 839 | Protein_14 | Streptomycin 3''-adenylyltransferase | ARG |
| QCL60_RS24270 (QCL60_24265) | 14216..14818 | + | 603 | Protein_15 | IS91 family transposase ISAzo26 | Transposase |
| QCL60_RS24275 (QCL60_24270) | 14871..15575 | - | 705 | WP_033545665.1 | IS6 family transposase IS26 | Transposase |
| QCL60_RS24280 (QCL60_24275) | 15640..16167 | + | 528 | Protein_17 | Tn3 family transposase | - |
| QCL60_RS24285 (QCL60_24280) | 16266..16904 | - | 639 | WP_024245155.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QCL60_RS24290 (QCL60_24285) | 17190..17810 | + | 621 | WP_000864791.1 | ParA family protein | - |
| QCL60_RS24295 (QCL60_24290) | 17862..18092 | + | 231 | WP_000051064.1 | plasmid partition protein ParG | - |
| QCL60_RS24300 (QCL60_24295) | 18108..18401 | + | 294 | WP_015060510.1 | hypothetical protein | - |
| QCL60_RS24305 (QCL60_24300) | 18403..19371 | + | 969 | WP_166501310.1 | IS5 family transposase IS903B | Transposase |
| QCL60_RS24310 (QCL60_24305) | 19431..19784 | - | 354 | WP_000876434.1 | DNA distortion polypeptide 3 | - |
| QCL60_RS24315 (QCL60_24310) | 19921..20367 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| QCL60_RS24320 (QCL60_24315) | 20407..21243 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| QCL60_RS24325 (QCL60_24320) | 22499..22750 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| QCL60_RS24330 (QCL60_24325) | 22740..23021 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QCL60_RS24335 (QCL60_24330) | 23167..23490 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| QCL60_RS24340 (QCL60_24335) | 23535..23780 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| QCL60_RS24345 (QCL60_24340) | 23770..23985 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| QCL60_RS24350 (QCL60_24345) | 24078..24407 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| QCL60_RS24355 (QCL60_24350) | 24694..24843 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| QCL60_RS24360 (QCL60_24355) | 24856..25128 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| QCL60_RS24365 (QCL60_24360) | 25455..26000 | + | 546 | WP_038976855.1 | DNA distortion polypeptide 1 | - |
| QCL60_RS24370 (QCL60_24365) | 26003..27160 | + | 1158 | WP_000538023.1 | DNA distortion polypeptide 2 | - |
| QCL60_RS24375 (QCL60_24370) | 27521..28012 | + | 492 | WP_000872475.1 | transcription termination/antitermination NusG family protein | - |
| QCL60_RS24380 (QCL60_24375) | 28237..28881 | + | 645 | WP_000953539.1 | hypothetical protein | VF |
| QCL60_RS24385 (QCL60_24380) | 28865..29155 | + | 291 | WP_000921916.1 | TrbC/VirB2 family protein | - |
| QCL60_RS24390 (QCL60_24385) | 29179..31938 | + | 2760 | WP_000108725.1 | Type IV secretion system protein virB4 | VF |
| QCL60_RS24395 (QCL60_24390) | 31940..32677 | + | 738 | WP_000737859.1 | type IV secretion system protein | - |
| QCL60_RS24400 (QCL60_24395) | 32687..32947 | + | 261 | WP_001228869.1 | EexN family lipoprotein | - |
| QCL60_RS24405 (QCL60_24400) | 32959..34014 | + | 1056 | WP_000235774.1 | type IV secretion system protein | - |
| QCL60_RS24410 (QCL60_24405) | 34204..34926 | + | 723 | WP_000394570.1 | Type IV secretion system protein PtlE | VF |
| QCL60_RS24415 (QCL60_24410) | 34932..35861 | + | 930 | WP_025755764.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| QCL60_RS24420 (QCL60_24415) | 35858..37072 | + | 1215 | WP_025755765.1 | hypothetical protein | VF |
| QCL60_RS24425 (QCL60_24420) | 37090..38127 | + | 1038 | WP_000217791.1 | Type IV secretion system protein PtlH | VF |
| QCL60_RS24430 (QCL60_24425) | 38132..39967 | + | 1836 | WP_025755766.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QCL60_RS24435 (QCL60_24430) | 39964..40359 | + | 396 | WP_000733627.1 | cag pathogenicity island Cag12 family protein | - |
| QCL60_RS24440 (QCL60_24435) | 40362..40694 | + | 333 | WP_000699980.1 | hypothetical protein | - |
| QCL60_RS24445 (QCL60_24440) | 40777..41247 | + | 471 | WP_025755767.1 | thermonuclease family protein | - |
| QCL60_RS24450 (QCL60_24445) | 41662..41907 | + | 246 | WP_001243650.1 | hypothetical protein | - |
| QCL60_RS24455 (QCL60_24450) | 41927..44251 | + | 2325 | WP_025755768.1 | type IA DNA topoisomerase | - |
| QCL60_RS24460 (QCL60_24455) | 44263..44712 | + | 450 | WP_001282381.1 | H-NS family nucleoid-associated regulatory protein | - |
| QCL60_RS24465 (QCL60_24460) | 44775..45179 | + | 405 | WP_000059893.1 | hypothetical protein | - |
| QCL60_RS24470 (QCL60_24465) | 45374..46078 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QCL60_RS24475 (QCL60_24470) | 46215..47075 | + | 861 | WP_002904004.1 | Beta-lactamase SHV-2 | ARG |
| QCL60_RS24480 (QCL60_24475) | 47096..47857 | - | 762 | WP_002210513.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| QCL60_RS24485 (QCL60_24480) | 48185..49762 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| QCL60_RS24490 (QCL60_24485) | 49916..49981 | + | 66 | Protein_59 | EAL domain-containing protein | - |
| QCL60_RS24495 (QCL60_24490) | 50099..50338 | + | 240 | Protein_60 | IS6 family transposase IS6100 | Transposase |
| QCL60_RS24500 (QCL60_24495) | 50369..53401 | - | 3033 | WP_124354296.1 | Tn3 family transposase ISPsy42 | Transposase |
| QCL60_RS24505 (QCL60_24500) | 53405..53965 | - | 561 | WP_148245970.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|