MGE detailed information
MGE type: Conjugative plasmid MGE length: 88955 bp
Accession: NZ_CP122511 Location: 1..88955 Organism: Escherichia coli strain W444 Replicon: plasmid unnamed4
Accession: NZ_CP122511 Location: 1..88955 Organism: Escherichia coli strain W444 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QC806_RS26005 (1) | 1..528 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QC806_RS26010 (579) | 579..983 | + | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| QC806_RS26015 (1047) | 1047..1235 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QC806_RS26020 (1219) | 1219..2019 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QC806_RS26025 (2109) | 2109..5153 | + | 3045 | WP_012783939.1 | IncI1-type conjugal transfer protein TraU | - |
| QC806_RS26030 (5153) | 5153..5767 | + | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| QC806_RS26035 (5734) | 5734..6936 | + | 1203 | WP_012783938.1 | IncI1-type conjugal transfer protein TraW | - |
| QC806_RS26040 (6965) | 6965..7549 | + | 585 | WP_012783937.1 | conjugal transfer protein TraX | - |
| QC806_RS26045 (7646) | 7646..9814 | + | 2169 | WP_015508354.1 | DotA/TraY family protein | - |
| QC806_RS26050 (9885) | 9885..10547 | + | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QC806_RS26055 (10619) | 10619..10828 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QC806_RS26060 (11220) | 11220..11396 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| QC806_RS26065 (11461) | 11461..11556 | - | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| QC806_RS26070 (12057) | 12057..12308 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| QC806_RS26075 (12380) | 12380..12532 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (12584) | 12584..12644 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (12584) | 12584..12644 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (12584) | 12584..12644 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (12584) | 12584..12644 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| QC806_RS26080 (13159) | 13159..13938 | + | 780 | WP_275450201.1 | protein FinQ | - |
| - (14008) | 14008..14065 | + | 58 | NuclAT_1 | - | - |
| - (14008) | 14008..14065 | + | 58 | NuclAT_1 | - | - |
| - (14008) | 14008..14065 | + | 58 | NuclAT_1 | - | - |
| - (14008) | 14008..14065 | + | 58 | NuclAT_1 | - | - |
| QC806_RS26085 (14245) | 14245..15453 | + | 1209 | WP_001703845.1 | IncI1-type conjugal transfer protein TrbA | - |
| QC806_RS26090 (15472) | 15472..16542 | + | 1071 | WP_012783932.1 | IncI1-type conjugal transfer protein TrbB | - |
| QC806_RS26095 (16535) | 16535..18826 | + | 2292 | WP_012783931.1 | F-type conjugative transfer protein TrbC | - |
| QC806_RS26100 (18863) | 18863..21562 | - | 2700 | WP_012783930.1 | hypothetical protein | Relaxase |
| QC806_RS26105 (21573) | 21573..21905 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QC806_RS26110 (22139) | 22139..22474 | + | 336 | WP_000157082.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QC806_RS26115 (22560) | 22560..23408 | - | 849 | WP_012783929.1 | DUF4942 domain-containing protein | - |
| QC806_RS26120 (23988) | 23988..24239 | + | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QC806_RS26125 (24270) | 24270..24476 | - | 207 | WP_000150314.1 | hypothetical protein | VF |
| QC806_RS26130 (24538) | 24538..25440 | - | 903 | WP_023150544.1 | ISNCY family transposase ISRor2 | VF |
| QC806_RS26135 (25437) | 25437..25826 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| QC806_RS26140 (26003) | 26003..26269 | - | 267 | WP_000804663.1 | hypothetical protein | - |
| QC806_RS26145 (26363) | 26363..26797 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| QC806_RS26150 (27526) | 27526..28026 | - | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| QC806_RS26155 (28488) | 28488..29084 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| QC806_RS26160 (29081) | 29081..29800 | - | 720 | WP_012783927.1 | plasmid SOS inhibition protein A | - |
| QC806_RS26165 (29797) | 29797..30231 | - | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| QC806_RS26170 (30284) | 30284..32270 | - | 1987 | Protein_34 | ParB/RepB/Spo0J family partition protein | - |
| QC806_RS26175 (32410) | 32410..32763 | - | 354 | WP_284632248.1 | DUF905 family protein | - |
| QC806_RS26180 (32821) | 32821..33087 | - | 267 | Protein_36 | single-stranded DNA-binding protein | - |
| QC806_RS26185 (33084) | 33084..33421 | - | 338 | Protein_37 | class I SAM-dependent methyltransferase | - |
| QC806_RS26190 (33465) | 33465..33635 | - | 171 | WP_284632250.1 | hypothetical protein | - |
| QC806_RS26195 (33659) | 33659..34822 | - | 1164 | Protein_39 | DUF3560 domain-containing protein | - |
| QC806_RS26200 (34874) | 34874..35104 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QC806_RS26205 (35621) | 35621..35869 | + | 249 | WP_077249352.1 | hypothetical protein | - |
| QC806_RS26210 (36142) | 36142..36333 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QC806_RS26215 (36330) | 36330..36752 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QC806_RS26220 (36799) | 36799..37224 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QC806_RS26225 (37641) | 37641..38417 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| QC806_RS26230 (38468) | 38468..38986 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QC806_RS26235 (38916) | 38916..39137 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QC806_RS26240 (39138) | 39138..39821 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QC806_RS26245 (39898) | 39898..40193 | - | 296 | Protein_49 | hypothetical protein | - |
| QC806_RS26250 (40193) | 40193..40612 | - | 420 | WP_284632251.1 | plasmid partitioning/stability family protein | - |
| QC806_RS26255 (40615) | 40615..41595 | - | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| QC806_RS26260 (41930) | 41930..42265 | + | 336 | WP_001340323.1 | hypothetical protein | - |
| QC806_RS26265 (42270) | 42270..42356 | - | 87 | Protein_53 | hypothetical protein | - |
| QC806_RS26270 (42360) | 42360..43262 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| QC806_RS26275 (43680) | 43680..43928 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| QC806_RS26280 (43925) | 43925..44362 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QC806_RS26285 (44362) | 44362..45633 | + | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| QC806_RS26290 (45829) | 45829..46455 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| QC806_RS26295 (46452) | 46452..46754 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| QC806_RS26300 (47261) | 47261..48655 | - | 1395 | WP_023150520.1 | protein YagA | - |
| QC806_RS26305 (48598) | 48598..48942 | + | 345 | Protein_61 | WbuC family cupin fold metalloprotein | - |
| QC806_RS26310 (48989) | 48989..49864 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| QC806_RS26315 (50120) | 50120..51382 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| QC806_RS26320 (51937) | 51937..52539 | + | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| QC806_RS26325 (52595) | 52595..53104 | + | 510 | WP_012783913.1 | hypothetical protein | - |
| QC806_RS26330 (53337) | 53337..53477 | - | 141 | WP_032072206.1 | hypothetical protein | - |
| QC806_RS26335 (54173) | 54173..55204 | - | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
| QC806_RS26340 (56210) | 56210..56440 | + | 231 | WP_228772074.1 | ash family protein | - |
| QC806_RS26345 (56358) | 56358..56645 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QC806_RS26350 (57087) | 57087..57620 | + | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| QC806_RS26355 (57874) | 57874..58557 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| QC806_RS26360 (58571) | 58571..59137 | + | 567 | WP_000776428.1 | protein TraD | - |
| QC806_RS26365 (59405) | 59405..59659 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| QC806_RS26370 (59702) | 59702..60154 | + | 453 | WP_001535696.1 | hypothetical protein | - |
| QC806_RS26375 (60828) | 60828..61895 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
| QC806_RS26380 (61895) | 61895..62332 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| QC806_RS26385 (62346) | 62346..64028 | + | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QC806_RS26390 (64021) | 64021..65316 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| QC806_RS26395 (65303) | 65303..65755 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| QC806_RS26400 (65766) | 65766..67319 | + | 1554 | WP_000362202.1 | hypothetical protein | VF |
| QC806_RS26405 (67332) | 67332..68429 | + | 1098 | WP_001208805.1 | hypothetical protein | VF |
| QC806_RS26410 (68447) | 68447..69061 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| QC806_RS26415 (69071) | 69071..69631 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| QC806_RS26420 (69616) | 69616..70272 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| QC806_RS26425 (70272) | 70272..71564 | + | 1293 | WP_001417545.1 | hypothetical protein | VF |
| QC806_RS26430 (71561) | 71561..71809 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| QC806_RS26435 (72978) | 72978..73331 | - | 354 | WP_001393368.1 | hypothetical protein | - |
| QC806_RS26440 (73330) | 73330..74484 | + | 1155 | WP_001139957.1 | site-specific integrase | - |
| QC806_RS26445 (74635) | 74635..75459 | + | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| QC806_RS26450 (75544) | 75544..76746 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QC806_RS26455 (76806) | 76806..77390 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QC806_RS26460 (77784) | 77784..78242 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| QC806_RS26465 (78239) | 78239..79057 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| QC806_RS26470 (79054) | 79054..80202 | + | 1149 | WP_001024971.1 | putative protein YggR | VF |
| QC806_RS26475 (80199) | 80199..80489 | + | 291 | WP_001314267.1 | hypothetical protein | - |
| QC806_RS26480 (80504) | 80504..81055 | + | 552 | WP_012783942.1 | Phospholipase D | VF |
| QC806_RS26485 (81145) | 81145..84912 | + | 3768 | WP_012783940.1 | DUF5710 domain-containing protein | - |
| QC806_RS26490 (84930) | 84930..85277 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QC806_RS26495 (85274) | 85274..85966 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| QC806_RS26500 (85977) | 85977..86960 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| QC806_RS26505 (86963) | 86963..88252 | + | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|