MGE detailed information
MGE type: Mobilizable plasmid MGE length: 66482 bp
Accession: NZ_CP122506 Location: 1..66482 Organism: Escherichia coli strain W619 Replicon: plasmid unnamed3
Accession: NZ_CP122506 Location: 1..66482 Organism: Escherichia coli strain W619 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QC808_RS24510 | 1..987 | + | 987 | WP_000326838.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QC808_RS24515 | 1034..1552 | + | 519 | WP_015387353.1 | YfdA protein | - |
| QC808_RS24520 | 1545..3182 | + | 1638 | WP_284656536.1 | Outer membrane lipoprotein BfpB | VF |
| QC808_RS24525 | 3305..4543 | + | 1239 | WP_284656567.1 | type 4b pilus protein PilO2 | - |
| QC808_RS24530 | 4527..4910 | + | 384 | WP_284656537.1 | type IV pilus biogenesis protein PilP | - |
| QC808_RS24535 | 5043..6581 | + | 1539 | WP_001420475.1 | Type II secretion system protein E | VF |
| QC808_RS24540 | 6572..7681 | + | 1110 | WP_000974900.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QC808_RS24545 | 7726..8283 | + | 558 | WP_000095051.1 | type 4 pilus major pilin | - |
| QC808_RS24550 | 8350..8832 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| QC808_RS24555 | 8836..9471 | + | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| QC808_RS24560 | 9484..10098 | + | 615 | WP_284656540.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| QC808_RS24565 | 11200..12324 | + | 1125 | WP_000486719.1 | site-specific integrase | - |
| QC808_RS24570 | 12336..12989 | + | 654 | WP_015387348.1 | hypothetical protein | - |
| QC808_RS24575 | 13036..13554 | + | 519 | WP_000698399.1 | thermonuclease family protein | - |
| QC808_RS24580 | 13570..13974 | + | 405 | WP_001218543.1 | hypothetical protein | - |
| QC808_RS24585 | 14338..14925 | + | 588 | WP_015387347.1 | DUF6012 family protein | - |
| QC808_RS24590 | 14937..17093 | + | 2157 | WP_000765172.1 | type IA DNA topoisomerase | - |
| QC808_RS24595 | 17568..17888 | + | 321 | WP_000668719.1 | hypothetical protein | - |
| QC808_RS24600 | 18007..18213 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| QC808_RS24605 | 18359..18790 | + | 432 | WP_000465832.1 | hypothetical protein | - |
| QC808_RS24610 | 19035..19475 | + | 441 | WP_015387343.1 | hypothetical protein | - |
| QC808_RS24615 | 19518..23723 | - | 4206 | WP_015387342.1 | hypothetical protein | - |
| QC808_RS24620 | 23720..24061 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| QC808_RS24625 | 24430..24831 | + | 402 | WP_000717860.1 | hypothetical protein | - |
| QC808_RS24630 | 24849..25601 | + | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| QC808_RS24635 | 25603..26310 | + | 708 | WP_000108796.1 | hypothetical protein | - |
| QC808_RS24640 | 26330..26452 | + | 123 | Protein_26 | hypothetical protein | - |
| QC808_RS24645 | 26751..27014 | + | 264 | WP_000224227.1 | hypothetical protein | - |
| QC808_RS24650 | 27051..27229 | + | 179 | Protein_28 | hypothetical protein | - |
| QC808_RS24655 | 27563..27676 | + | 114 | Protein_29 | DUF551 domain-containing protein | - |
| QC808_RS24660 | 27978..28241 | + | 264 | WP_000224227.1 | hypothetical protein | - |
| QC808_RS24665 | 28278..28456 | + | 179 | Protein_31 | hypothetical protein | - |
| QC808_RS24670 | 28694..29158 | - | 465 | WP_284656545.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| QC808_RS24675 | 29183..29365 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| QC808_RS24680 | 29662..30105 | + | 444 | WP_000192626.1 | hypothetical protein | - |
| QC808_RS24685 | 30527..30820 | - | 294 | WP_000954637.1 | hypothetical protein | - |
| QC808_RS24690 | 30835..31209 | - | 375 | WP_015387341.1 | hypothetical protein | - |
| QC808_RS24695 | 31261..31548 | - | 288 | WP_000673430.1 | hypothetical protein | - |
| QC808_RS24700 | 32298..33560 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| QC808_RS24705 | 33813..34688 | + | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| QC808_RS24710 | 34735..35079 | - | 345 | Protein_40 | WbuC family cupin fold metalloprotein | - |
| QC808_RS24715 | 35204..35446 | - | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| QC808_RS24720 | 35443..35697 | - | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| QC808_RS24725 | 35694..36236 | - | 543 | WP_001083904.1 | hypothetical protein | - |
| QC808_RS24730 | 36340..36855 | - | 516 | WP_001025393.1 | J domain-containing protein | - |
| QC808_RS24735 | 37259..37588 | - | 330 | WP_000855119.1 | hypothetical protein | - |
| QC808_RS24740 | 38175..38840 | + | 666 | WP_015387337.1 | division plane positioning ATPase MipZ | - |
| QC808_RS24745 | 38914..39198 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| QC808_RS24750 | 39216..39812 | - | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| QC808_RS24755 | 39961..40083 | - | 123 | WP_223202818.1 | Hok/Gef family protein | - |
| QC808_RS24760 | 40031..40177 | - | 147 | Protein_50 | DUF5431 family protein | - |
| QC808_RS24765 | 40908..41894 | - | 987 | WP_284656548.1 | plasmid replication initiator RepA | - |
| QC808_RS24770 | 42657..43109 | + | 453 | WP_000101553.1 | CaiF/GrlA family transcriptional regulator | - |
| QC808_RS24775 | 43102..43296 | + | 195 | WP_000049865.1 | DUF1187 family protein | - |
| QC808_RS24780 | 43342..44295 | + | 954 | WP_072105959.1 | SPFH domain-containing protein | - |
| QC808_RS24785 | 44368..44811 | + | 444 | WP_000964840.1 | NfeD family protein | - |
| QC808_RS24790 | 44815..44985 | + | 171 | WP_000550721.1 | hypothetical protein | - |
| QC808_RS24795 | 44996..45658 | + | 663 | WP_001419740.1 | hypothetical protein | - |
| QC808_RS24800 | 45806..46057 | + | 252 | WP_015387362.1 | hypothetical protein | - |
| QC808_RS24805 | 46073..46375 | + | 303 | WP_001360345.1 | hypothetical protein | - |
| QC808_RS24810 | 46372..46629 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| QC808_RS24815 | 46633..47619 | + | 987 | WP_001419739.1 | type IV secretion system protein | - |
| QC808_RS24820 | 47625..48272 | + | 648 | WP_001419738.1 | hypothetical protein | VF |
| QC808_RS24825 | 48276..48512 | + | 237 | WP_000750964.1 | EexN family lipoprotein | - |
| QC808_RS24830 | 48559..49368 | - | 810 | WP_001419737.1 | DUF5710 domain-containing protein | - |
| QC808_RS24835 | 49416..50048 | + | 633 | WP_001419736.1 | hypothetical protein | - |
| QC808_RS24840 | 50115..50414 | + | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QC808_RS24845 | 50417..51652 | + | 1236 | WP_001419735.1 | hypothetical protein | VF |
| QC808_RS24850 | 51658..52095 | + | 438 | WP_284656555.1 | type IV pilus biogenesis protein PilM | - |
| QC808_RS24855 | 52435..52833 | + | 399 | WP_001708012.1 | hypothetical protein | - |
| QC808_RS24860 | 52854..53438 | + | 585 | WP_001401693.1 | Type IV secretion system protein virB1 | VF |
| QC808_RS24865 | 53438..53728 | + | 291 | WP_000865479.1 | conjugal transfer protein | - |
| QC808_RS24870 | 53799..54119 | + | 321 | WP_000362081.1 | VirB3 family type IV secretion system protein | - |
| QC808_RS24875 | 54125..56482 | + | 2358 | WP_015387356.1 | VirB4 family type IV secretion system protein | - |
| QC808_RS24880 | 56647..57381 | + | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| QC808_RS24885 | 57378..58148 | + | 771 | WP_015387355.1 | Type IV secretion system protein PtlF | VF |
| QC808_RS24890 | 58138..59277 | + | 1140 | WP_015387354.1 | Type IV secretion system protein virB10 | VF |
| QC808_RS24895 | 59296..60351 | + | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| QC808_RS24900 | 60367..61272 | + | 906 | WP_284656558.1 | Conjugal transfer protein TraG | VF |
| QC808_RS24905 | 61296..61499 | + | 204 | WP_284656560.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QC808_RS24910 | 61522..61956 | + | 435 | WP_284656562.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QC808_RS24915 | 62003..62521 | + | 519 | WP_015387353.1 | YfdA protein | - |
| QC808_RS24920 | 62514..64157 | + | 1644 | WP_001035590.1 | Outer membrane lipoprotein BfpB | VF |
| QC808_RS24925 | 64208..65284 | + | 1077 | WP_284656564.1 | type 4b pilus protein PilO2 | - |
| QC808_RS24930 | 65373..65516 | + | 144 | WP_249925802.1 | hypothetical protein | - |
| QC808_RS24935 | 65500..65994 | + | 495 | WP_000912551.1 | type IV pilus biogenesis protein PilP | - |
| QC808_RS24940 | 66019..66482 | + | 464 | Protein_86 | type II secretion protein E | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|