MGE detailed information
MGE type: Conjugative plasmid MGE length: 86106 bp
Accession: NZ_CP122501 Location: 1..86106 Organism: Escherichia coli strain W409 Replicon: plasmid unnamed2
Accession: NZ_CP122501 Location: 1..86106 Organism: Escherichia coli strain W409 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QC809_RS24390 (583) | 583..1209 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| QC809_RS24395 (1206) | 1206..1508 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| QC809_RS24400 (2023) | 2023..3417 | - | 1395 | WP_023150520.1 | protein YagA | - |
| QC809_RS24405 (3360) | 3360..3704 | + | 345 | Protein_4 | WbuC family cupin fold metalloprotein | - |
| QC809_RS24410 (3751) | 3751..4626 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| QC809_RS24415 (4882) | 4882..6144 | - | 1263 | WP_284654824.1 | IS1380 family transposase ISEcp1 | Transposase |
| QC809_RS24420 (6699) | 6699..7301 | + | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| QC809_RS24425 (7357) | 7357..7866 | + | 510 | WP_012783913.1 | hypothetical protein | - |
| QC809_RS24430 (8936) | 8936..9967 | - | 1032 | WP_024176529.1 | plasmid replication initiator RepA | - |
| QC809_RS24435 (10925) | 10925..11083 | + | 159 | Protein_10 | ash family protein | - |
| QC809_RS24440 (11121) | 11121..11408 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| QC809_RS24445 (11850) | 11850..12383 | + | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| QC809_RS24450 (12637) | 12637..13320 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QC809_RS24455 (13493) | 13493..14044 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| QC809_RS24460 (14206) | 14206..14460 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| QC809_RS24465 (14627) | 14627..14923 | + | 297 | WP_000494780.1 | hypothetical protein | - |
| QC809_RS24470 (15547) | 15547..16614 | + | 1068 | WP_012783947.1 | hypothetical protein | VF |
| QC809_RS24475 (16614) | 16614..17051 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| QC809_RS24480 (17065) | 17065..18747 | + | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QC809_RS24485 (18740) | 18740..20035 | + | 1296 | WP_012783946.1 | type 4b pilus protein PilO2 | - |
| QC809_RS24490 (20022) | 20022..20474 | + | 453 | WP_012783945.1 | hypothetical protein | VF |
| QC809_RS24495 (20485) | 20485..22038 | + | 1554 | WP_001492932.1 | hypothetical protein | VF |
| QC809_RS24500 (22051) | 22051..23148 | + | 1098 | WP_001492931.1 | hypothetical protein | VF |
| QC809_RS24505 (23166) | 23166..23780 | + | 615 | WP_001542527.1 | hypothetical protein | VF |
| QC809_RS24510 (23790) | 23790..24350 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| QC809_RS24515 (24335) | 24335..24991 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| QC809_RS24520 (24991) | 24991..26256 | + | 1266 | WP_284654825.1 | hypothetical protein | VF |
| QC809_RS24525 (26332) | 26332..26580 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| QC809_RS24530 (27152) | 27152..27475 | - | 324 | WP_284654826.1 | hypothetical protein | - |
| QC809_RS24535 (27474) | 27474..28628 | + | 1155 | WP_001139955.1 | site-specific integrase | - |
| QC809_RS24540 (28779) | 28779..29603 | + | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| QC809_RS24545 (29689) | 29689..30891 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QC809_RS24550 (30951) | 30951..31535 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QC809_RS24555 (31929) | 31929..32387 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| QC809_RS24560 (32384) | 32384..33202 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| QC809_RS24565 (33199) | 33199..34347 | + | 1149 | WP_001024971.1 | putative protein YggR | VF |
| QC809_RS24570 (34344) | 34344..34634 | + | 291 | WP_001314267.1 | hypothetical protein | - |
| QC809_RS24575 (34649) | 34649..35200 | + | 552 | WP_012783942.1 | Phospholipase D | VF |
| QC809_RS24580 (35290) | 35290..39057 | + | 3768 | WP_012783940.1 | DUF5710 domain-containing protein | - |
| QC809_RS24585 (39075) | 39075..39422 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QC809_RS24590 (39419) | 39419..40111 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| QC809_RS24595 (40122) | 40122..41105 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| QC809_RS24600 (41108) | 41108..42397 | + | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| QC809_RS24605 (42397) | 42397..43101 | + | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| QC809_RS24610 (43101) | 43101..43628 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QC809_RS24615 (43679) | 43679..44083 | + | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| QC809_RS24620 (44147) | 44147..44335 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QC809_RS24625 (44319) | 44319..45119 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QC809_RS24630 (45209) | 45209..48253 | + | 3045 | WP_012783939.1 | IncI1-type conjugal transfer protein TraU | - |
| QC809_RS24635 (48253) | 48253..48867 | + | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| QC809_RS24640 (48834) | 48834..50036 | + | 1203 | WP_012783938.1 | IncI1-type conjugal transfer protein TraW | - |
| QC809_RS24645 (50065) | 50065..50649 | + | 585 | WP_012783937.1 | conjugal transfer protein TraX | - |
| QC809_RS24650 (50746) | 50746..52914 | + | 2169 | WP_015508354.1 | DotA/TraY family protein | - |
| QC809_RS24655 (52985) | 52985..53647 | + | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QC809_RS24660 (53719) | 53719..53928 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QC809_RS24665 (54320) | 54320..54496 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| QC809_RS24670 (54561) | 54561..54656 | - | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| QC809_RS24675 (55157) | 55157..55408 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| QC809_RS24680 (55480) | 55480..55632 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (55684) | 55684..55744 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (55684) | 55684..55744 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (55684) | 55684..55744 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (55684) | 55684..55744 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| QC809_RS24685 (56259) | 56259..57038 | + | 780 | WP_275450201.1 | protein FinQ | - |
| - (57108) | 57108..57165 | + | 58 | NuclAT_1 | - | - |
| - (57108) | 57108..57165 | + | 58 | NuclAT_1 | - | - |
| - (57108) | 57108..57165 | + | 58 | NuclAT_1 | - | - |
| - (57108) | 57108..57165 | + | 58 | NuclAT_1 | - | - |
| QC809_RS24690 (57345) | 57345..58553 | + | 1209 | WP_001703845.1 | IncI1-type conjugal transfer protein TrbA | - |
| QC809_RS24695 (58572) | 58572..59642 | + | 1071 | WP_012783932.1 | IncI1-type conjugal transfer protein TrbB | - |
| QC809_RS24700 (59635) | 59635..61926 | + | 2292 | WP_012783931.1 | F-type conjugative transfer protein TrbC | - |
| QC809_RS24705 (61963) | 61963..64662 | - | 2700 | WP_012783930.1 | hypothetical protein | Relaxase |
| QC809_RS24710 (64673) | 64673..65005 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QC809_RS24715 (65239) | 65239..65574 | + | 336 | WP_000157082.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QC809_RS24720 (65660) | 65660..66508 | - | 849 | WP_012783929.1 | DUF4942 domain-containing protein | - |
| QC809_RS24725 (67088) | 67088..67339 | + | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QC809_RS24730 (67370) | 67370..67576 | - | 207 | WP_000150314.1 | hypothetical protein | VF |
| QC809_RS24735 (67638) | 67638..68540 | - | 903 | WP_023150544.1 | ISNCY family transposase ISRor2 | VF |
| QC809_RS24740 (68537) | 68537..68926 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| QC809_RS24745 (69103) | 69103..69369 | - | 267 | WP_000804663.1 | hypothetical protein | - |
| QC809_RS24750 (69463) | 69463..69897 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| QC809_RS24755 (70626) | 70626..71126 | - | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| QC809_RS24760 (71588) | 71588..72184 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| QC809_RS24765 (72181) | 72181..72900 | - | 720 | WP_012783927.1 | plasmid SOS inhibition protein A | - |
| QC809_RS24770 (72897) | 72897..73331 | - | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| QC809_RS24775 (73384) | 73384..75342 | - | 1959 | WP_063267868.1 | ParB/RepB/Spo0J family partition protein | - |
| QC809_RS24780 (75401) | 75401..75634 | - | 234 | WP_015508350.1 | DUF905 domain-containing protein | - |
| QC809_RS24785 (75692) | 75692..76219 | - | 528 | WP_012783926.1 | single-stranded DNA-binding protein | - |
| QC809_RS24790 (76603) | 76603..76866 | - | 264 | WP_158213465.1 | hypothetical protein | - |
| QC809_RS24795 (77004) | 77004..77195 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QC809_RS24800 (77192) | 77192..77614 | - | 423 | WP_000271703.1 | DUF1380 family protein | - |
| QC809_RS24805 (77661) | 77661..78086 | - | 426 | WP_001198889.1 | antirestriction protein | - |
| QC809_RS24810 (78499) | 78499..79269 | - | 771 | WP_012783922.1 | hypothetical protein | - |
| QC809_RS24815 (79314) | 79314..79832 | - | 519 | WP_223350510.1 | DUF1380 family protein | - |
| QC809_RS24820 (79762) | 79762..79983 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QC809_RS24825 (79984) | 79984..80667 | - | 684 | WP_000086127.1 | DNA methylase | - |
| QC809_RS24830 (80743) | 80743..81054 | - | 312 | WP_033863049.1 | hypothetical protein | - |
| QC809_RS24835 (81058) | 81058..81480 | - | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| QC809_RS24840 (81483) | 81483..82463 | - | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| QC809_RS24845 (82801) | 82801..83136 | + | 336 | WP_001340323.1 | hypothetical protein | - |
| QC809_RS24850 (83141) | 83141..83227 | - | 87 | Protein_93 | hypothetical protein | - |
| QC809_RS24855 (83231) | 83231..84133 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| QC809_RS24860 (84551) | 84551..84799 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| QC809_RS24865 (84796) | 84796..85233 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|