MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93587 bp
Accession: NZ_CP122473 Location: 1..93587 Organism: Klebsiella pneumoniae subsp. pneumoniae strain IITJ_BC16 Replicon: plasmid pBC16_IncFIBK
Accession: NZ_CP122473 Location: 1..93587 Organism: Klebsiella pneumoniae subsp. pneumoniae strain IITJ_BC16 Replicon: plasmid pBC16_IncFIBK
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P9M40_RS28305 (P9M40_28300) | 1..1011 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| P9M40_RS28310 (P9M40_28305) | 1728..2468 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| P9M40_RS28315 (P9M40_28310) | 2535..3755 | - | 1221 | WP_000343760.1 | ISL3 family transposase ISKox3 | Transposase |
| P9M40_RS28320 (P9M40_28315) | 3825..3992 | + | 168 | WP_004225304.1 | hypothetical protein | - |
| P9M40_RS28325 (P9M40_28320) | 4822..5790 | + | 969 | WP_004099053.1 | IS5 family transposase IS903B | Transposase |
| P9M40_RS28330 (P9M40_28325) | 6002..6949 | + | 948 | WP_004152065.1 | sensor domain-containing diguanylate cyclase | - |
| P9M40_RS28335 (P9M40_28330) | 6976..7287 | - | 312 | WP_071527918.1 | EAL domain-containing protein | - |
| P9M40_RS28340 (P9M40_28335) | 7307..8275 | + | 969 | WP_011977741.1 | IS5 family transposase IS903B | Transposase |
| P9M40_RS28345 (P9M40_28340) | 8948..9205 | - | 258 | WP_004197688.1 | hypothetical protein | - |
| P9M40_RS28350 (P9M40_28345) | 9846..10361 | + | 516 | Protein_9 | CSS-motif domain-containing protein | - |
| P9M40_RS28355 (P9M40_28350) | 10425..11261 | + | 837 | WP_004178087.1 | putative cyclic di-GMP phosphodiesterase PdeC | VF |
| P9M40_RS28360 (P9M40_28355) | 12244..13521 | - | 1278 | WP_004152070.1 | DUF2254 domain-containing protein | - |
| P9M40_RS28365 (P9M40_28360) | 13584..15581 | - | 1998 | WP_004178088.1 | choline BCCT transporter BetT | - |
| P9M40_RS28380 (P9M40_28375) | 17919..18403 | + | 485 | Protein_15 | IS1 family transposase IS1X2 | Transposase |
| P9M40_RS28385 (P9M40_28380) | 18419..18961 | + | 543 | Protein_16 | ISL3 family transposase ISKpn25 | Transposase |
| P9M40_RS28390 (P9M40_28385) | 19257..19688 | - | 432 | WP_004178091.1 | silver-binding protein SilE | - |
| P9M40_RS28395 (P9M40_28390) | 19939..21414 | - | 1476 | WP_003032875.1 | copper/silver sensor histidine kinase SilS | - |
| P9M40_RS28400 (P9M40_28395) | 21407..22087 | - | 681 | WP_001572351.1 | Transcriptional regulatory protein CusR | VF |
| P9M40_RS28405 (P9M40_28400) | 22277..23662 | + | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| P9M40_RS28410 (P9M40_28405) | 23691..24044 | + | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| P9M40_RS28415 (P9M40_28410) | 24158..25450 | + | 1293 | WP_004152079.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| P9M40_RS28420 (P9M40_28415) | 25461..28607 | + | 3147 | WP_004098958.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| P9M40_RS28425 (P9M40_28420) | 28694..28885 | + | 192 | Protein_24 | hypothetical protein | - |
| P9M40_RS28430 (P9M40_28425) | 28968..29372 | + | 405 | WP_003031976.1 | IS66 family transposase ISKpn24 | Transposase |
| P9M40_RS28435 (P9M40_28430) | 29369..29716 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| P9M40_RS28440 (P9M40_28435) | 29765..31303 | + | 1539 | WP_004201219.1 | IS66 family transposase ISKpn24 | Transposase |
| P9M40_RS28445 (P9M40_28440) | 31342..31596 | + | 255 | Protein_28 | DUF411 domain-containing protein | - |
| P9M40_RS28450 (P9M40_28445) | 31723..34170 | + | 2448 | WP_004098955.1 | Ag(+)-translocating P-type ATPase SilP | - |
| P9M40_RS28455 (P9M40_28450) | 34211..34408 | + | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| P9M40_RS28460 (P9M40_28455) | 34442..35179 | - | 738 | WP_004118669.1 | Murein DD-endopeptidase MepM | VF |
| P9M40_RS28465 (P9M40_28460) | 35468..35917 | - | 450 | WP_001023257.1 | copper resistance protein | - |
| P9M40_RS28470 (P9M40_28465) | 36151..37968 | + | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| P9M40_RS28475 (P9M40_28470) | 37974..38864 | + | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| P9M40_RS28480 (P9M40_28475) | 38904..39284 | + | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| P9M40_RS28485 (P9M40_28480) | 39289..40218 | + | 930 | WP_004118344.1 | copper resistance inner membrane protein PcoD | - |
| P9M40_RS28490 (P9M40_28485) | 40273..40953 | + | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| P9M40_RS28495 (P9M40_28490) | 40950..42350 | + | 1401 | WP_004152084.1 | copper resistance membrane spanning protein PcoS | - |
| P9M40_RS28500 (P9M40_28495) | 42567..42902 | + | 336 | Protein_39 | copper-binding protein | - |
| P9M40_RS28505 (P9M40_28500) | 42939..44477 | - | 1539 | WP_004201219.1 | IS66 family transposase ISKpn24 | Transposase |
| P9M40_RS28510 (P9M40_28505) | 44526..44873 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| P9M40_RS28515 (P9M40_28510) | 44870..45274 | - | 405 | WP_003031976.1 | IS66 family transposase ISKpn24 | Transposase |
| P9M40_RS28520 (P9M40_28515) | 45356..45463 | + | 108 | Protein_43 | copper-binding protein | - |
| P9M40_RS28525 (P9M40_28520) | 45695..45874 | - | 180 | WP_004152086.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| P9M40_RS28530 (P9M40_28525) | 45935..47555 | - | 1621 | Protein_45 | ISL3 family transposase ISEc38 | Transposase |
| P9M40_RS28535 (P9M40_28530) | 47617..48126 | + | 510 | WP_031944101.1 | aquaporin | - |
| P9M40_RS28540 (P9M40_28535) | 48176..48673 | - | 498 | WP_004152091.1 | GNAT family N-acetyltransferase | - |
| P9M40_RS28545 (P9M40_28540) | 49005..49331 | + | 327 | WP_004152092.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| P9M40_RS28550 (P9M40_28545) | 49328..50041 | + | 714 | WP_004152093.1 | arsenical resistance protein ArsH | - |
| P9M40_RS28555 (P9M40_28550) | 50050..50595 | + | 546 | WP_004182005.1 | sigma-70 family RNA polymerase sigma factor | - |
| P9M40_RS28560 (P9M40_28555) | 50671..51033 | + | 363 | WP_004152095.1 | arsenic metallochaperone ArsD family protein | - |
| P9M40_RS28565 (P9M40_28560) | 51052..52808 | + | 1757 | Protein_52 | arsenical pump-driving ATPase | - |
| P9M40_RS28570 (P9M40_28565) | 52930..53466 | + | 537 | WP_004152096.1 | GNAT family N-acetyltransferase | - |
| P9M40_RS28575 (P9M40_28570) | 53499..53924 | - | 426 | WP_004152097.1 | glutaredoxin-dependent arsenate reductase | - |
| P9M40_RS28580 (P9M40_28575) | 53937..55226 | - | 1290 | WP_004152098.1 | arsenite efflux transporter membrane subunit ArsB | - |
| P9M40_RS28585 (P9M40_28580) | 55274..57025 | - | 1752 | WP_004152099.1 | Arsenical pump-driving ATPase | VF |
| P9M40_RS28590 (P9M40_28585) | 57043..57405 | - | 363 | WP_004152100.1 | arsenite efflux transporter metallochaperone ArsD | - |
| P9M40_RS28595 (P9M40_28590) | 57455..57805 | - | 351 | WP_004152101.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| P9M40_RS28600 (P9M40_28595) | 58163..58432 | + | 270 | WP_004152102.1 | hypothetical protein | - |
| P9M40_RS28605 (P9M40_28600) | 58420..58995 | + | 576 | WP_004152103.1 | hypothetical protein | - |
| P9M40_RS28610 (P9M40_28605) | 59026..59520 | + | 495 | WP_004152104.1 | DNA-binding protein | - |
| P9M40_RS28615 (P9M40_28610) | 59564..59932 | + | 369 | WP_004152105.1 | hypothetical protein | - |
| P9M40_RS28620 (P9M40_28615) | 59966..60169 | + | 204 | WP_004152106.1 | HHA domain-containing protein | - |
| P9M40_RS28625 (P9M40_28620) | 60218..60475 | + | 258 | WP_004152107.1 | hypothetical protein | - |
| P9M40_RS28630 (P9M40_28625) | 60551..60805 | + | 255 | WP_004152108.1 | hypothetical protein | - |
| P9M40_RS28635 (P9M40_28630) | 60981..61247 | + | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| P9M40_RS28640 (P9M40_28635) | 61235..61717 | + | 483 | WP_003026803.1 | GNAT family N-acetyltransferase | Toxin Detail |
| P9M40_RS28645 (P9M40_28640) | 61925..63271 | + | 1347 | WP_077255522.1 | ISNCY family transposase ISLad2 | Transposase |
| P9M40_RS28650 (P9M40_28645) | 63320..63718 | + | 399 | WP_032422684.1 | ISNCY family transposase ISKpn21 | Transposase |
| P9M40_RS28655 (P9M40_28650) | 63914..65260 | + | 1347 | WP_020314316.1 | ISNCY family transposase ISLad2 | Transposase |
| P9M40_RS28660 (P9M40_28655) | 65421..65552 | + | 132 | WP_004218042.1 | hypothetical protein | - |
| P9M40_RS28665 (P9M40_28660) | 65761..66926 | - | 1166 | Protein_72 | IS3 family transposase ISKpn38 | Transposase |
| P9M40_RS28670 (P9M40_28665) | 67103..68065 | - | 963 | WP_004152113.1 | zinc metalloprotease HtpX | - |
| P9M40_RS28675 (P9M40_28670) | 68052..68540 | - | 489 | WP_004152114.1 | phosphate-starvation-inducible PsiE family protein | - |
| P9M40_RS28680 (P9M40_28675) | 68655..68801 | - | 147 | Protein_75 | diguanylate cyclase | - |
| P9M40_RS28685 (P9M40_28680) | 69039..69236 | - | 198 | WP_004152115.1 | hypothetical protein | - |
| P9M40_RS28690 (P9M40_28685) | 69236..72031 | - | 2796 | WP_004152116.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| P9M40_RS28695 (P9M40_28690) | 72146..72715 | - | 570 | WP_004152117.1 | hypothetical protein | VF |
| P9M40_RS28700 (P9M40_28695) | 72750..73031 | - | 282 | WP_004152118.1 | helix-turn-helix domain-containing protein | - |
| P9M40_RS28705 (P9M40_28700) | 73275..73538 | - | 264 | WP_004118208.1 | hypothetical protein | - |
| P9M40_RS28710 (P9M40_28705) | 73553..73816 | + | 264 | WP_004118209.1 | IS66 family transposase ISPpu19 | Transposase |
| P9M40_RS28715 (P9M40_28710) | 73761..73877 | + | 117 | Protein_82 | transposase domain-containing protein | - |
| P9M40_RS28720 (P9M40_28715) | 74062..74759 | + | 698 | WP_223174644.1 | IS1 family transposase | - |
| P9M40_RS28725 (P9M40_28720) | 75018..75998 | + | 981 | WP_014386148.1 | IS5 family transposase ISKpn26 | Transposase |
| P9M40_RS28730 (P9M40_28725) | 76580..77099 | - | 520 | Protein_85 | IS5 family transposase ISPst7 | Transposase |
| P9M40_RS28735 (P9M40_28730) | 77207..78076 | - | 870 | WP_004152692.1 | HTH-type transcriptional activator CmpR | VF |
| P9M40_RS28740 (P9M40_28735) | 78070..79080 | - | 1011 | WP_004152693.1 | phosphonate dehydrogenase PtxD | - |
| P9M40_RS28745 (P9M40_28740) | 79089..79916 | - | 828 | WP_004152694.1 | phosphonate ABC transporter, permease protein PhnE | - |
| P9M40_RS28750 (P9M40_28745) | 79925..80788 | - | 864 | WP_004152695.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| P9M40_RS28755 (P9M40_28750) | 80785..81612 | - | 828 | WP_014386147.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| P9M40_RS28760 (P9M40_28755) | 81954..82262 | + | 309 | Protein_91 | IS5 family transposase ISThi1 | Transposase |
| P9M40_RS28765 (P9M40_28760) | 82468..83001 | - | 534 | Protein_92 | IS6 family transposase IS26 | Transposase |
| P9M40_RS28770 (P9M40_28765) | 82970..83227 | - | 258 | WP_279751856.1 | DNA polymerase III subunit theta | - |
| P9M40_RS28775 (P9M40_28770) | 83464..83889 | - | 426 | WP_004118478.1 | antirestriction protein | - |
| P9M40_RS28780 (P9M40_28775) | 84410..84640 | - | 231 | WP_004118481.1 | hypothetical protein | - |
| P9M40_RS28785 (P9M40_28780) | 84897..86117 | + | 1221 | WP_000343760.1 | ISL3 family transposase ISKox3 | Transposase |
| P9M40_RS28790 (P9M40_28785) | 86179..86604 | + | 426 | WP_004182047.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| P9M40_RS28795 (P9M40_28790) | 86604..87875 | + | 1272 | WP_014386156.1 | Y-family DNA polymerase | - |
| P9M40_RS28800 (P9M40_28795) | 88014..88169 | + | 156 | WP_001776126.1 | hypothetical protein | - |
| P9M40_RS28805 (P9M40_28800) | 88192..89390 | - | 1199 | Protein_100 | IS200-IS605 family transposase IS609 | Transposase |
| P9M40_RS28810 (P9M40_28805) | 90699..91670 | - | 972 | WP_004152062.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| P9M40_RS28815 (P9M40_28810) | 91670..92836 | - | 1167 | WP_000523813.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|