MGE detailed information
MGE type: Conjugative plasmid MGE length: 115290 bp
Accession: NZ_CP122449 Location: 1..115290 Organism: Escherichia coli strain 85.0412 Replicon: plasmid p1
Accession: NZ_CP122449 Location: 1..115290 Organism: Escherichia coli strain 85.0412 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QBY77_RS24655 (1) | 1..858 | + | 858 | WP_000131004.1 | incFII family plasmid replication initiator RepA | - |
| QBY77_RS24660 (1914) | 1914..2618 | + | 705 | WP_001067837.1 | IS6 family transposase IS26 | Transposase |
| QBY77_RS24665 (2705) | 2705..2875 | + | 171 | Protein_2 | DsbA family protein | - |
| QBY77_RS24670 (2865) | 2865..3371 | + | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| QBY77_RS24675 (3608) | 3608..4369 | + | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| QBY77_RS24680 (4716) | 4716..6602 | + | 1887 | WP_001332815.1 | FTR1 family protein | - |
| QBY77_RS24685 (6643) | 6643..7170 | + | 528 | WP_000178050.1 | iron transporter | - |
| QBY77_RS24690 (7274) | 7274..8653 | + | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| QBY77_RS24695 (8656) | 8656..9939 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| QBY77_RS24700 (9929) | 9929..11059 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| QBY77_RS24705 (11064) | 11064..11759 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| QBY77_RS24710 (11746) | 11746..12231 | + | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| QBY77_RS24715 (12256) | 12256..12741 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| QBY77_RS24720 (12863) | 12863..13496 | + | 634 | Protein_13 | histidine-type phosphatase | - |
| QBY77_RS24725 (13646) | 13646..13819 | - | 174 | Protein_14 | IS5 family transposase ISKpn26 | Transposase |
| QBY77_RS24730 (13820) | 13820..14134 | - | 315 | Protein_15 | IS5 family transposase ISKpn26 | Transposase |
| QBY77_RS24735 (14807) | 14807..15157 | - | 351 | Protein_16 | IS3 family transposase IS629 | Transposase |
| QBY77_RS24740 (15243) | 15243..16742 | + | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| QBY77_RS24745 (16739) | 16739..17494 | + | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| QBY77_RS24750 (17559) | 17559..17962 | - | 404 | Protein_19 | IS3 family transposase IS629 | Transposase |
| QBY77_RS24755 (17988) | 17988..18293 | + | 306 | Protein_20 | IS91 family transposase ISSbo1 | Transposase |
| QBY77_RS24760 (18816) | 18816..19991 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| QBY77_RS24765 (20060) | 20060..22321 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| QBY77_RS24770 (22490) | 22490..23266 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| QBY77_RS24775 (23274) | 23274..24149 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| QBY77_RS24780 (24481) | 24481..25167 | - | 687 | Protein_25 | replication initiation protein | - |
| QBY77_RS24785 (25478) | 25478..26446 | + | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| QBY77_RS24790 (27685) | 27685..28020 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| QBY77_RS24795 (28149) | 28149..28496 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| QBY77_RS24800 (28516) | 28516..29025 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| QBY77_RS24805 (29022) | 29022..29282 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| QBY77_RS24810 (29384) | 29384..30123 | + | 740 | Protein_31 | IS3 family transposase IS629 | Transposase |
| QBY77_RS24815 (30796) | 30796..32304 | + | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| QBY77_RS24820 (32388) | 32388..32726 | + | 339 | Protein_33 | IS3 family transposase IS629 | Transposase |
| QBY77_RS24825 (32806) | 32806..33210 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| QBY77_RS24830 (33207) | 33207..33554 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| QBY77_RS24835 (33603) | 33603..34548 | + | 946 | Protein_36 | IS66 family transposase ISEc8 | Transposase |
| QBY77_RS24840 (34634) | 34634..35656 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| QBY77_RS24845 (35653) | 35653..36435 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| QBY77_RS24850 (36503) | 36503..37111 | + | 609 | Protein_39 | IS66 family transposase ISEc22 | Transposase |
| QBY77_RS24855 (37174) | 37174..37965 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| QBY77_RS24860 (37972) | 37972..39942 | - | 1971 | WP_001298664.1 | Hemin receptor | VF |
| QBY77_RS24865 (40224) | 40224..40648 | + | 425 | Protein_42 | IS3 family transposase IS2 | Transposase |
| QBY77_RS24870 (41185) | 41185..41457 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| QBY77_RS24875 (41903) | 41903..42078 | + | 176 | Protein_44 | IS3 family transposase | - |
| QBY77_RS24880 (42304) | 42304..43473 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| QBY77_RS24885 (43840) | 43840..44028 | + | 189 | WP_001332784.1 | hypothetical protein | - |
| QBY77_RS24890 (44149) | 44149..44889 | + | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| QBY77_RS24895 (45132) | 45132..46109 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| QBY77_RS24900 (47284) | 47284..47925 | - | 642 | WP_000990667.1 | hypothetical protein | - |
| QBY77_RS24905 (50247) | 50247..50465 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QBY77_RS24910 (50467) | 50467..50772 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QBY77_RS24915 (50773) | 50773..51582 | + | 810 | WP_000016979.1 | site-specific integrase | - |
| QBY77_RS24920 (51720) | 51720..51995 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| QBY77_RS24925 (51989) | 51989..52633 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| QBY77_RS24930 (52862) | 52862..53833 | + | 972 | WP_001103694.1 | plasmid segregation protein ParM | - |
| QBY77_RS24935 (53838) | 53838..54230 | + | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| QBY77_RS24940 (54235) | 54235..55505 | - | 1271 | Protein_57 | translesion error-prone DNA polymerase V subunit UmuC | - |
| QBY77_RS24945 (55505) | 55505..55942 | - | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QBY77_RS24950 (55939) | 55939..56187 | - | 249 | WP_000619112.1 | DinI-like family protein | - |
| QBY77_RS24955 (56322) | 56322..56840 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| QBY77_RS24960 (56859) | 56859..58079 | + | 1221 | WP_000343766.1 | ISL3 family transposase ISEc53 | Transposase |
| QBY77_RS24965 (58498) | 58498..59328 | + | 831 | WP_001298676.1 | DUF1281 domain-containing protein | - |
| QBY77_RS24970 (59322) | 59322..60119 | - | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| QBY77_RS24975 (60119) | 60119..61291 | - | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| QBY77_RS24980 (61395) | 61395..61535 | + | 141 | Protein_65 | hypothetical protein | - |
| QBY77_RS24985 (61532) | 61532..61843 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| QBY77_RS24990 (61919) | 61919..62602 | + | 684 | WP_000086169.1 | DNA methylase | - |
| QBY77_RS24995 (62603) | 62603..62824 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| QBY77_RS25000 (62754) | 62754..63272 | + | 519 | WP_223364201.1 | DUF1380 family protein | - |
| QBY77_RS25005 (63317) | 63317..64087 | + | 771 | WP_001004562.1 | hypothetical protein | - |
| QBY77_RS25010 (64503) | 64503..64928 | + | 426 | WP_001198903.1 | antirestriction protein | - |
| QBY77_RS25015 (64975) | 64975..65397 | + | 423 | WP_000271708.1 | DUF1380 family protein | - |
| QBY77_RS25020 (65394) | 65394..65585 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| QBY77_RS25025 (66548) | 66548..66778 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| QBY77_RS25030 (66830) | 66830..68191 | + | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| QBY77_RS25035 (68238) | 68238..68801 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| QBY77_RS25040 (68887) | 68887..69339 | - | 453 | WP_024185774.1 | hypothetical protein | - |
| QBY77_RS25045 (69641) | 69641..70168 | + | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| QBY77_RS25050 (70225) | 70225..70458 | + | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| QBY77_RS25055 (70517) | 70517..72475 | + | 1959 | WP_001145500.1 | ParB/RepB/Spo0J family partition protein | - |
| QBY77_RS25060 (72530) | 72530..72964 | + | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| QBY77_RS25065 (72961) | 72961..73724 | + | 764 | Protein_82 | plasmid SOS inhibition protein A | - |
| - (73692) | 73692..73891 | + | 200 | NuclAT_0 | - | - |
| - (73692) | 73692..73891 | + | 200 | NuclAT_0 | - | - |
| - (73692) | 73692..73891 | + | 200 | NuclAT_0 | - | - |
| - (73692) | 73692..73891 | + | 200 | NuclAT_0 | - | - |
| QBY77_RS25070 (73898) | 73898..74047 | + | 150 | Protein_83 | DUF5431 family protein | - |
| QBY77_RS25075 (73989) | 73989..74114 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| QBY77_RS25080 (74432) | 74432..74729 | - | 298 | Protein_85 | hypothetical protein | - |
| QBY77_RS25085 (75030) | 75030..75317 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| QBY77_RS25090 (75436) | 75436..76257 | + | 822 | WP_001234489.1 | DUF932 domain-containing protein | - |
| QBY77_RS25095 (76553) | 76553..77155 | - | 603 | WP_001323326.1 | hypothetical protein | VF |
| QBY77_RS25100 (77486) | 77486..77869 | + | 384 | WP_001151562.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QBY77_RS25105 (78063) | 78063..78749 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| QBY77_RS25110 (78843) | 78843..79070 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| QBY77_RS25115 (79104) | 79104..79463 | + | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| QBY77_RS25120 (79478) | 79478..79789 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| QBY77_RS25125 (79811) | 79811..80377 | + | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| QBY77_RS25130 (80364) | 80364..81092 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| QBY77_RS25135 (81092) | 81092..82519 | + | 1428 | WP_000146665.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QBY77_RS25140 (82509) | 82509..83099 | + | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QBY77_RS25145 (83086) | 83086..83406 | + | 321 | WP_001057274.1 | conjugal transfer protein TrbD | - |
| QBY77_RS25150 (83399) | 83399..83651 | + | 253 | Protein_99 | conjugal transfer protein TrbG | - |
| QBY77_RS25155 (83648) | 83648..84163 | + | 516 | WP_000809889.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QBY77_RS25160 (84298) | 84298..84519 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| QBY77_RS25165 (84512) | 84512..84985 | + | 474 | WP_000549566.1 | hypothetical protein | - |
| QBY77_RS25170 (85065) | 85065..85283 | + | 219 | WP_000556746.1 | hypothetical protein | - |
| QBY77_RS25175 (85650) | 85650..88280 | + | 2631 | WP_000069778.1 | type IV secretion system protein TraC | - |
| QBY77_RS25180 (88277) | 88277..88663 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| QBY77_RS25185 (88660) | 88660..89292 | + | 633 | WP_001203736.1 | type-F conjugative transfer system protein TraW | - |
| QBY77_RS25190 (89289) | 89289..90281 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| QBY77_RS25195 (90311) | 90311..90616 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| QBY77_RS25200 (90625) | 90625..91263 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QBY77_RS25205 (91260) | 91260..93110 | + | 1851 | WP_000821859.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QBY77_RS25210 (93137) | 93137..93394 | + | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| QBY77_RS25215 (93387) | 93387..94130 | + | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QBY77_RS25220 (94144) | 94144..94485 | + | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| QBY77_RS25225 (94466) | 94466..94801 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| QBY77_RS25230 (94882) | 94882..95166 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QBY77_RS25235 (95153) | 95153..95698 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QBY77_RS25240 (95628) | 95628..95975 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| QBY77_RS25245 (95956) | 95956..96348 | + | 393 | WP_283154801.1 | F-type conjugal transfer protein TrbF | - |
| QBY77_RS25250 (96335) | 96335..97708 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| QBY77_RS25255 (97705) | 97705..100527 | + | 2823 | WP_019842169.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QBY77_RS25260 (100543) | 100543..101028 | + | 486 | WP_000605869.1 | hypothetical protein | - |
| QBY77_RS25265 (101077) | 101077..101808 | + | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| QBY77_RS25270 (102011) | 102011..102748 | + | 738 | WP_000199901.1 | hypothetical protein | - |
| QBY77_RS25275 (102799) | 102799..104943 | + | 2145 | WP_000009347.1 | type IV conjugative transfer system coupling protein TraD | - |
| QBY77_RS25280 (104943) | 104943..110213 | + | 5271 | WP_000948349.1 | Multifunctional conjugation protein TraI | Relaxase |
| QBY77_RS25285 (110233) | 110233..110979 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| QBY77_RS25290 (111038) | 111038..111898 | + | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| QBY77_RS25295 (112001) | 112001..112561 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| QBY77_RS25300 (112690) | 112690..112902 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| QBY77_RS25305 (113147) | 113147..113608 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| QBY77_RS25310 (113654) | 113654..113863 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| QBY77_RS25315 (113901) | 113901..114491 | + | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| QBY77_RS25320 (114731) | 114731..114991 | + | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| QBY77_RS25325 (115095) | 115095..115278 | + | 184 | Protein_134 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|