MGE detailed information
MGE type: Prophage MGE length: 70150 bp
Accession: NZ_CP122328 Location: 630966..701115 Organism: Pantoea agglomerans pv. betae strain 4188 Replicon: chromosome
Accession: NZ_CP122328 Location: 630966..701115 Organism: Pantoea agglomerans pv. betae strain 4188 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7P61_RS07165 (A7P61_07165) | 627021..627176 | + | 156 | WP_216844881.1 | YnfU family zinc-binding protein | - |
| A7P61_RS07170 (A7P61_07170) | 627295..627567 | - | 273 | WP_231115760.1 | hypothetical protein | - |
| A7P61_RS07175 (A7P61_07175) | 627912..628022 | + | 111 | WP_074399995.1 | tail fiber assembly protein | - |
| A7P61_RS07180 (A7P61_07180) | 628500..628721 | + | 222 | WP_064704037.1 | hypothetical protein | - |
| A7P61_RS07185 (A7P61_07185) | 629162..629605 | + | 444 | WP_064704036.1 | hypothetical protein | - |
| A7P61_RS07190 (A7P61_07190) | 629614..629925 | + | 312 | WP_064704035.1 | DUF1493 family protein | - |
| A7P61_RS07195 (A7P61_07195) | 629913..630302 | + | 390 | WP_031590904.1 | hypothetical protein | - |
| A7P61_RS07200 (A7P61_07200) | 630299..630622 | + | 324 | WP_064704034.1 | DUF1493 family protein | - |
| A7P61_RS07205 (A7P61_07205) | 630755..630898 | - | 144 | WP_155740536.1 | hypothetical protein | - |
| A7P61_RS07210 (A7P61_07210) | 630966..631469 | + | 504 | WP_064704033.1 | hypothetical protein | - |
| A7P61_RS07215 (A7P61_07215) | 632042..632317 | + | 276 | WP_155740535.1 | hypothetical protein | - |
| A7P61_RS07220 (A7P61_07220) | 632726..633508 | + | 783 | WP_196766519.1 | reverse transcriptase domain-containing protein | - |
| A7P61_RS07225 (A7P61_07225) | 633760..634797 | - | 1038 | WP_064704030.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| A7P61_RS07230 (A7P61_07230) | 634797..635369 | - | 573 | WP_064704029.1 | phage repressor protein CI | - |
| A7P61_RS07235 (A7P61_07235) | 635503..635766 | + | 264 | WP_010256626.1 | hypothetical protein | - |
| A7P61_RS07240 (A7P61_07240) | 635797..636306 | + | 510 | WP_064704028.1 | phage regulatory CII family protein | - |
| A7P61_RS07245 (A7P61_07245) | 636316..636498 | + | 183 | WP_064704027.1 | DUF2724 domain-containing protein | - |
| A7P61_RS07250 (A7P61_07250) | 636500..636880 | + | 381 | WP_283833918.1 | hypothetical protein | - |
| A7P61_RS07255 (A7P61_07255) | 636946..637167 | + | 222 | WP_064704025.1 | DUF2732 family protein | - |
| A7P61_RS07260 (A7P61_07260) | 637167..637379 | + | 213 | WP_064704024.1 | TraR/DksA family transcriptional regulator | - |
| A7P61_RS07265 (A7P61_07265) | 637366..637728 | + | 363 | WP_064704023.1 | DUF5405 family protein | - |
| A7P61_RS07270 (A7P61_07270) | 637725..638588 | + | 864 | WP_064704022.1 | DNA adenine methylase | - |
| A7P61_RS07275 (A7P61_07275) | 638585..640831 | + | 2247 | WP_064704021.1 | replication endonuclease | - |
| A7P61_RS07280 (A7P61_07280) | 641036..641227 | + | 192 | WP_064704020.1 | hypothetical protein | - |
| A7P61_RS07285 (A7P61_07285) | 641243..641479 | + | 237 | WP_223812774.1 | DinI family protein | - |
| A7P61_RS07290 (A7P61_07290) | 641554..641811 | + | 258 | WP_064704019.1 | hypothetical protein | - |
| A7P61_RS07295 (A7P61_07295) | 642178..642432 | + | 255 | WP_029519675.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| A7P61_RS07300 (A7P61_07300) | 642429..642770 | + | 342 | WP_064704018.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| A7P61_RS07305 (A7P61_07305) | 642866..643846 | + | 981 | WP_064704017.1 | hypothetical protein | - |
| A7P61_RS07310 (A7P61_07310) | 643875..644915 | - | 1041 | WP_064704016.1 | phage portal protein | - |
| A7P61_RS07315 (A7P61_07315) | 644915..646678 | - | 1764 | WP_064704015.1 | terminase ATPase subunit family protein | - |
| A7P61_RS07320 (A7P61_07320) | 646823..647671 | + | 849 | WP_064704014.1 | GPO family capsid scaffolding protein | - |
| A7P61_RS07325 (A7P61_07325) | 647724..648854 | + | 1131 | WP_064704013.1 | phage major capsid protein, P2 family | - |
| A7P61_RS07330 (A7P61_07330) | 648858..649526 | + | 669 | WP_283833920.1 | terminase endonuclease subunit | - |
| A7P61_RS07335 (A7P61_07335) | 649619..650089 | + | 471 | WP_064704199.1 | head completion/stabilization protein | - |
| A7P61_RS07340 (A7P61_07340) | 650089..650292 | + | 204 | WP_064704198.1 | tail protein X | - |
| A7P61_RS07345 (A7P61_07345) | 650295..650513 | + | 219 | WP_064704197.1 | HP1 family phage holin | - |
| A7P61_RS07350 (A7P61_07350) | 650497..651006 | + | 510 | WP_010256694.1 | lysozyme | - |
| A7P61_RS07355 (A7P61_07355) | 651003..651425 | + | 423 | WP_064704196.1 | Rz-like lysis system protein LysB | - |
| A7P61_RS07360 (A7P61_07360) | 651322..651594 | + | 273 | WP_231115768.1 | Rz1-like lysis system protein LysC | - |
| A7P61_RS07365 (A7P61_07365) | 651527..651994 | + | 468 | WP_064704195.1 | phage tail protein | - |
| A7P61_RS07370 (A7P61_07370) | 651991..652440 | + | 450 | WP_064704194.1 | phage virion morphogenesis protein | - |
| A7P61_RS07375 (A7P61_07375) | 652510..653094 | + | 585 | WP_064704193.1 | phage baseplate assembly protein V | - |
| A7P61_RS07380 (A7P61_07380) | 653091..653441 | + | 351 | WP_064704192.1 | GPW/gp25 family protein | - |
| A7P61_RS07385 (A7P61_07385) | 653446..654354 | + | 909 | WP_064704191.1 | baseplate assembly protein | - |
| A7P61_RS07390 (A7P61_07390) | 654347..654955 | + | 609 | WP_064704190.1 | phage tail protein I | - |
| A7P61_RS07395 (A7P61_07395) | 654952..655911 | + | 960 | WP_283833921.1 | phage tail protein | - |
| A7P61_RS07400 (A7P61_07400) | 655912..656316 | + | 405 | WP_064704188.1 | tail fiber assembly protein | - |
| A7P61_RS07405 (A7P61_07405) | 656448..657449 | - | 1002 | WP_064704187.1 | PIN domain-containing protein | - |
| A7P61_RS07410 (A7P61_07410) | 657648..658040 | - | 393 | WP_064704186.1 | tail fiber assembly protein | - |
| A7P61_RS07415 (A7P61_07415) | 658040..658678 | - | 639 | WP_283833922.1 | hypothetical protein | - |
| A7P61_RS07420 (A7P61_07420) | 658739..659317 | + | 579 | WP_031594562.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| A7P61_RS07425 (A7P61_07425) | 659398..660567 | + | 1170 | WP_283833923.1 | phage tail sheath protein | - |
| A7P61_RS07430 (A7P61_07430) | 660580..661089 | + | 510 | WP_010246672.1 | phage major tail tube protein | - |
| A7P61_RS07435 (A7P61_07435) | 661148..661426 | + | 279 | WP_064703144.1 | phage tail assembly protein | - |
| A7P61_RS07440 (A7P61_07440) | 661459..661584 | + | 126 | WP_071778604.1 | GpE family phage tail protein | - |
| A7P61_RS07445 (A7P61_07445) | 661574..664036 | + | 2463 | WP_064703145.1 | phage tail tape measure protein | - |
| A7P61_RS07450 (A7P61_07450) | 664040..664567 | + | 528 | WP_064703146.1 | phage tail protein | - |
| A7P61_RS07455 (A7P61_07455) | 664564..665736 | + | 1173 | WP_064703147.1 | phage late control D family protein | - |
| A7P61_RS07460 (A7P61_07460) | 665805..666023 | + | 219 | WP_010678536.1 | ogr/Delta-like zinc finger family protein | - |
| A7P61_RS07465 (A7P61_07465) | 666071..666556 | - | 486 | WP_231115727.1 | hypothetical protein | - |
| A7P61_RS07475 (A7P61_07475) | 666914..667705 | - | 792 | WP_064703149.1 | hypothetical protein | VF |
| A7P61_RS07480 (A7P61_07480) | 667844..668428 | + | 585 | WP_064703150.1 | TetR/AcrR family transcriptional regulator | - |
| A7P61_RS07485 (A7P61_07485) | 668425..668943 | + | 519 | WP_064703151.1 | G/U mismatch-specific DNA glycosylase | - |
| A7P61_RS07490 (A7P61_07490) | 669018..670859 | - | 1842 | WP_010699749.1 | RNA polymerase sigma factor RpoD | - |
| A7P61_RS07495 (A7P61_07495) | 671299..673044 | - | 1746 | WP_064703153.1 | DNA primase | - |
| A7P61_RS07500 (A7P61_07500) | 673163..673378 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| A7P61_RS07505 (A7P61_07505) | 673657..674670 | + | 1014 | WP_010249066.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| A7P61_RS07510 (A7P61_07510) | 674700..675304 | - | 605 | Protein_644 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| A7P61_RS07515 (A7P61_07515) | 675413..675772 | + | 360 | WP_010249061.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| A7P61_RS07520 (A7P61_07520) | 675964..676782 | + | 819 | WP_031590888.1 | undecaprenyl-diphosphate phosphatase | - |
| A7P61_RS07525 (A7P61_07525) | 676798..678030 | - | 1233 | WP_031590887.1 | multifunctional CCA addition/repair protein | - |
| A7P61_RS07530 (A7P61_07530) | 678189..678809 | - | 621 | WP_008925741.1 | TIGR04211 family SH3 domain-containing protein | - |
| A7P61_RS07535 (A7P61_07535) | 679082..680392 | + | 1311 | WP_064703154.1 | inorganic triphosphatase | - |
| A7P61_RS07540 (A7P61_07540) | 680426..683278 | + | 2853 | WP_064703155.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| A7P61_RS07545 (A7P61_07545) | 683349..684773 | + | 1425 | WP_010249049.1 | Bifunctional protein HldE | VF |
| A7P61_RS07550 (A7P61_07550) | 684813..685202 | - | 390 | WP_031590881.1 | accessory factor UbiK family protein | - |
| A7P61_RS07555 (A7P61_07555) | 685642..686298 | + | 657 | WP_031590879.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| A7P61_RS07560 (A7P61_07560) | 686532..687317 | + | 786 | WP_064703156.1 | 4,5-DOPA dioxygenase extradiol | - |
| A7P61_RS07565 (A7P61_07565) | 687369..688529 | - | 1161 | WP_039390665.1 | glutathionylspermidine synthase family protein | - |
| A7P61_RS07570 (A7P61_07570) | 688537..689208 | - | 672 | WP_010249037.1 | DUF1190 family protein | - |
| A7P61_RS07575 (A7P61_07575) | 689351..690817 | - | 1467 | WP_064703157.1 | outer membrane channel protein TolC | - |
| A7P61_RS07580 (A7P61_07580) | 691031..691666 | + | 636 | WP_031590867.1 | ADP-ribose diphosphatase | - |
| A7P61_RS07585 (A7P61_07585) | 691663..692088 | + | 426 | WP_008925735.1 | DUF1249 family protein | - |
| A7P61_RS07590 (A7P61_07590) | 692131..692958 | + | 828 | WP_064703158.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| A7P61_RS07595 (A7P61_07595) | 692962..693543 | + | 582 | WP_010249032.1 | esterase YqiA | - |
| A7P61_RS07600 (A7P61_07600) | 693593..695488 | + | 1896 | WP_010249031.1 | DNA topoisomerase IV subunit B | - |
| A7P61_RS07605 (A7P61_07605) | 695583..696482 | + | 900 | WP_064703159.1 | HTH-type transcriptional regulator DmlR | VF |
| A7P61_RS07610 (A7P61_07610) | 696778..697086 | - | 309 | WP_010249029.1 | putative quinol monooxygenase | - |
| A7P61_RS07615 (A7P61_07615) | 697135..697716 | - | 582 | WP_010249028.1 | NAD(P)H-dependent oxidoreductase | - |
| A7P61_RS07620 (A7P61_07620) | 697885..698649 | + | 765 | WP_231115728.1 | transporter substrate-binding domain-containing protein | - |
| A7P61_RS07625 (A7P61_07625) | 698842..701115 | + | 2274 | WP_064703160.1 | DNA topoisomerase IV subunit A | - |
| A7P61_RS07630 (A7P61_07630) | 701161..701898 | + | 738 | WP_064703161.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| A7P61_RS07635 (A7P61_07635) | 702040..703470 | + | 1431 | WP_010249023.1 | cell division protein FtsP | - |
| A7P61_RS07640 (A7P61_07640) | 703569..704393 | - | 825 | WP_010249022.1 | 2,5-didehydrogluconate reductase DkgA | - |
| A7P61_RS07645 (A7P61_07645) | 704598..705506 | + | 909 | WP_031590853.1 | AraC family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|