MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 131449 bp
Accession: NZ_CP122323 Location: 1..131449 Organism: Pantoea agglomerans pv. gypsophilae strain 824-1 Replicon: plasmid pPATHpag
Accession: NZ_CP122323 Location: 1..131449 Organism: Pantoea agglomerans pv. gypsophilae strain 824-1 Replicon: plasmid pPATHpag
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7P62_RS22775 (A7P62_22775) | 1..1407 | + | 1407 | WP_064691077.1 | UvrD-helicase domain-containing protein | - |
| A7P62_RS22780 (A7P62_22780) | 1459..2751 | + | 1293 | WP_074399341.1 | hypothetical protein | Relaxase |
| A7P62_RS22785 (A7P62_22785) | 2651..2986 | + | 336 | WP_064691078.1 | RAQPRD family integrative conjugative element protein | - |
| A7P62_RS22790 (A7P62_22790) | 2986..3228 | + | 243 | WP_064691079.1 | TIGR03758 family integrating conjugative element protein | - |
| A7P62_RS22795 (A7P62_22795) | 3258..3647 | + | 390 | WP_081276238.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| A7P62_RS22800 (A7P62_22800) | 3663..4028 | + | 366 | WP_064691080.1 | TIGR03750 family conjugal transfer protein | - |
| A7P62_RS22805 (A7P62_22805) | 4025..4663 | + | 639 | WP_064691081.1 | TIGR03746 family integrating conjugative element protein | - |
| A7P62_RS22810 (A7P62_22810) | 4678..5580 | + | 903 | WP_155740609.1 | TIGR03749 family integrating conjugative element protein | - |
| A7P62_RS22815 (A7P62_22815) | 5570..7117 | + | 1548 | WP_064691083.1 | TIGR03752 family integrating conjugative element protein | - |
| A7P62_RS22820 (A7P62_22820) | 7129..7545 | + | 417 | WP_064691084.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| A7P62_RS22825 (A7P62_22825) | 7545..10403 | + | 2859 | WP_064691085.1 | conjugative transfer ATPase | - |
| A7P62_RS22830 (A7P62_22830) | 10400..12019 | + | 1620 | WP_231113951.1 | integrating conjugative element protein | - |
| A7P62_RS22835 (A7P62_22835) | 12016..12399 | + | 384 | WP_081276239.1 | hypothetical protein | - |
| A7P62_RS22840 (A7P62_22840) | 12399..13907 | + | 1509 | WP_064691086.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| A7P62_RS22845 (A7P62_22845) | 14235..14696 | + | 462 | WP_064691087.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| A7P62_RS22850 (A7P62_22850) | 14696..15271 | + | 576 | WP_064691088.1 | PIN domain-containing protein | Toxin Detail |
| A7P62_RS22855 (A7P62_22855) | 15306..15776 | - | 471 | WP_196766611.1 | hypothetical protein | - |
| A7P62_RS22860 (A7P62_22860) | 16091..16327 | + | 237 | Protein_17 | DNA polymerase V subunit UmuC | - |
| A7P62_RS22865 (A7P62_22865) | 16309..16671 | - | 363 | WP_196766613.1 | hypothetical protein | - |
| A7P62_RS22870 (A7P62_22870) | 16913..18379 | - | 1467 | WP_032490486.1 | Phosphocholine transferase AnkX | VF |
| A7P62_RS22875 (A7P62_22875) | 18867..19531 | + | 665 | Protein_20 | chemotaxis protein | - |
| A7P62_RS22880 (A7P62_22880) | 19531..19701 | - | 171 | Protein_21 | IS3 family transposase IS1400 | Transposase |
| A7P62_RS22885 (A7P62_22885) | 19827..20369 | + | 543 | WP_064691090.1 | chorismate mutase | - |
| A7P62_RS22890 (A7P62_22890) | 20862..21308 | - | 447 | WP_196766494.1 | VirK family protein | - |
| A7P62_RS22895 (A7P62_22895) | 22214..22902 | - | 689 | Protein_24 | DUF4113 domain-containing protein | - |
| A7P62_RS22900 (A7P62_22900) | 22969..23666 | + | 698 | Protein_25 | IS6 family transposase | - |
| A7P62_RS22905 (A7P62_22905) | 24005..25846 | + | 1842 | WP_064690490.1 | hypothetical protein | - |
| A7P62_RS22910 (A7P62_22910) | 26189..26401 | + | 213 | WP_196766516.1 | hypothetical protein | - |
| A7P62_RS22915 (A7P62_22915) | 26578..27274 | + | 697 | WP_283841771.1 | IS6 family transposase | - |
| A7P62_RS22920 (A7P62_22920) | 27579..27983 | - | 405 | WP_064690638.1 | cupin domain-containing protein | - |
| A7P62_RS22925 (A7P62_22925) | 28425..28781 | + | 357 | WP_064690639.1 | hypothetical protein | - |
| A7P62_RS22930 (A7P62_22930) | 29263..29442 | + | 180 | Protein_31 | S24 family peptidase | - |
| A7P62_RS22935 (A7P62_22935) | 29574..29993 | - | 420 | WP_064690666.1 | type III secretion system chaperone | - |
| A7P62_RS22940 (A7P62_22940) | 30050..36016 | - | 5967 | WP_231113925.1 | AvrE-family type 3 secretion system effector | - |
| A7P62_RS22945 (A7P62_22945) | 36078..36476 | - | 399 | WP_155740597.1 | hypothetical protein | - |
| A7P62_RS22950 (A7P62_22950) | 36724..37077 | - | 354 | WP_231113926.1 | type III secretion system chaperone | - |
| A7P62_RS22955 (A7P62_22955) | 37162..37872 | - | 711 | WP_269202043.1 | hypothetical protein | - |
| A7P62_RS22960 (A7P62_22960) | 37890..38312 | - | 423 | WP_269202044.1 | hypothetical protein | - |
| A7P62_RS22965 (A7P62_22965) | 38590..38940 | - | 351 | WP_064690641.1 | HrpV family type III secretion system protein | - |
| A7P62_RS22970 (A7P62_22970) | 38933..39130 | - | 198 | WP_231113927.1 | HrpT family type III secretion system protein | - |
| A7P62_RS22975 (A7P62_22975) | 39141..41174 | - | 2034 | WP_064690642.1 | Yop proteins translocation protein C | VF |
| A7P62_RS22980 (A7P62_22980) | 41167..41586 | - | 420 | WP_064690643.1 | type III secretion system chaperone | - |
| A7P62_RS22985 (A7P62_22985) | 41588..41812 | - | 225 | WP_064690644.1 | type III secretion protein HrpF | - |
| A7P62_RS22990 (A7P62_22990) | 41905..42492 | - | 588 | WP_064690645.1 | type III secretion system stator protein SctL | - |
| A7P62_RS22995 (A7P62_22995) | 42486..43076 | - | 591 | WP_064690646.1 | hypothetical protein | - |
| A7P62_RS23000 (A7P62_23000) | 43069..43848 | - | 780 | WP_064690647.1 | Yop proteins translocation lipoprotein J | VF |
| A7P62_RS23005 (A7P62_23005) | 43854..44219 | - | 366 | WP_064690648.1 | EscI/YscI/HrpB family type III secretion system inner rod protein | - |
| A7P62_RS23010 (A7P62_23010) | 44282..44521 | - | 240 | WP_064690649.1 | hypothetical protein | - |
| A7P62_RS23015 (A7P62_23015) | 44725..45699 | - | 975 | WP_064690650.1 | C4-dicarboxylate transport transcriptional regulatory protein DctD | VF |
| A7P62_RS23020 (A7P62_23020) | 46055..46696 | - | 642 | WP_064690651.1 | Response regulator UvrY | VF |
| A7P62_RS23025 (A7P62_23025) | 46701..48191 | - | 1491 | WP_064690652.1 | PAS domain S-box protein | - |
| A7P62_RS23030 (A7P62_23030) | 48336..48884 | - | 549 | WP_064690653.1 | sigma-70 family RNA polymerase sigma factor | - |
| A7P62_RS23035 (A7P62_23035) | 49160..50335 | + | 1176 | WP_064690654.1 | type III secretion system gatekeeper subunit SctW | - |
| A7P62_RS23040 (A7P62_23040) | 50336..52495 | + | 2160 | WP_064690655.1 | Secretion system apparatus protein SsaV | VF |
| A7P62_RS23045 (A7P62_23045) | 52474..53397 | + | 924 | WP_064690656.1 | hypothetical protein | VF |
| A7P62_RS23050 (A7P62_23050) | 53397..54755 | + | 1359 | WP_231113928.1 | Type III secretion ATP synthase HrcN | VF |
| A7P62_RS23055 (A7P62_23055) | 54742..55182 | + | 441 | WP_064690658.1 | hypothetical protein | - |
| A7P62_RS23060 (A7P62_23060) | 55179..55652 | + | 474 | WP_064690659.1 | type III secretion system HrpP C-terminal domain-containing protein | - |
| A7P62_RS23065 (A7P62_23065) | 55856..56659 | + | 804 | WP_283841770.1 | FliM/FliN family flagellar motor switch protein | - |
| A7P62_RS23070 (A7P62_23070) | 56656..57309 | + | 654 | WP_064690661.1 | Surface presentation of antigens protein SpaP | VF |
| A7P62_RS23075 (A7P62_23075) | 57319..57579 | + | 261 | WP_064690662.1 | hypothetical protein | VF |
| A7P62_RS23080 (A7P62_23080) | 57582..58379 | + | 798 | WP_064690663.1 | Surface presentation of antigens protein SpaR | VF |
| A7P62_RS23085 (A7P62_23085) | 58381..59463 | + | 1083 | WP_064690664.1 | Yop proteins translocation protein U | VF |
| A7P62_RS23090 (A7P62_23090) | 59571..60026 | + | 456 | WP_064690665.1 | GNAT family N-acetyltransferase | - |
| A7P62_RS23095 (A7P62_23095) | 60091..60506 | - | 416 | Protein_64 | transposase | - |
| A7P62_RS23100 (A7P62_23100) | 60639..61121 | + | 483 | Protein_65 | IS630 family transposase ISEhe1 | Transposase |
| A7P62_RS23110 (A7P62_23110) | 62067..62587 | + | 521 | Protein_67 | IS630 family transposase | - |
| A7P62_RS23115 (A7P62_23115) | 63424..64205 | + | 782 | Protein_68 | IS3 family transposase | - |
| A7P62_RS23125 (A7P62_23125) | 65428..65796 | + | 369 | Protein_70 | IS3 family transposase ISEhe3 | Transposase |
| A7P62_RS23130 (A7P62_23130) | 66007..66111 | - | 105 | Protein_71 | plasmid partition protein ParG | - |
| A7P62_RS23135 (A7P62_23135) | 66275..68395 | + | 2121 | WP_155740587.1 | XopB/HopD1 family type III secretion system effector | - |
| A7P62_RS23140 (A7P62_23140) | 68500..68686 | - | 187 | Protein_73 | hypothetical protein | - |
| A7P62_RS23145 (A7P62_23145) | 68747..69622 | + | 876 | Protein_74 | IS481 family transposase | - |
| A7P62_RS23155 (A7P62_23155) | 70487..72502 | - | 2016 | WP_064690505.1 | hypothetical protein | - |
| A7P62_RS23160 (A7P62_23160) | 72840..73537 | - | 698 | Protein_77 | IS6-like element IS1327 family transposase | - |
| A7P62_RS23165 (A7P62_23165) | 73716..74426 | - | 711 | WP_064690504.1 | isopentenyl transferase family protein | - |
| A7P62_RS23170 (A7P62_23170) | 74423..74929 | - | 507 | WP_064690503.1 | hypothetical protein | - |
| A7P62_RS23175 (A7P62_23175) | 75047..76417 | - | 1371 | WP_064690502.1 | Mandelamide hydrolase | VF |
| A7P62_RS23180 (A7P62_23180) | 76453..78144 | - | 1692 | WP_064690501.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| A7P62_RS23185 (A7P62_23185) | 78639..79314 | - | 676 | Protein_82 | IS1 family transposase | - |
| A7P62_RS23190 (A7P62_23190) | 79376..79561 | - | 186 | Protein_83 | IS30 family transposase | - |
| A7P62_RS23195 (A7P62_23195) | 79939..80343 | + | 405 | WP_064690499.1 | cupin domain-containing protein | - |
| A7P62_RS23200 (A7P62_23200) | 80534..81037 | + | 504 | WP_064690498.1 | GNAT family N-acetyltransferase | - |
| A7P62_RS23205 (A7P62_23205) | 81080..81775 | - | 696 | Protein_86 | IS1 family transposase | - |
| A7P62_RS23210 (A7P62_23210) | 81830..82642 | + | 813 | WP_269202041.1 | Coagulase/fibrinolysin | VF |
| A7P62_RS23215 (A7P62_23215) | 83483..84469 | - | 987 | WP_064690497.1 | ParB family protein | - |
| A7P62_RS23220 (A7P62_23220) | 84466..85674 | - | 1209 | WP_064690496.1 | Plasmid partition protein A | VF |
| A7P62_RS23225 (A7P62_23225) | 86989..87300 | - | 312 | WP_269202040.1 | hypothetical protein | - |
| A7P62_RS23230 (A7P62_23230) | 87343..87855 | - | 513 | WP_269202039.1 | RepB family plasmid replication initiator protein | - |
| A7P62_RS23235 (A7P62_23235) | 88180..88382 | - | 203 | Protein_92 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| A7P62_RS23240 (A7P62_23240) | 88689..89612 | + | 924 | WP_064690495.1 | IS5 family transposase ISEcl3 | Transposase |
| A7P62_RS23245 (A7P62_23245) | 89795..94831 | + | 5037 | WP_155740589.1 | transducer protein car | - |
| A7P62_RS23250 (A7P62_23250) | 95103..95799 | + | 697 | WP_283841773.1 | IS6 family transposase | - |
| A7P62_RS23255 (A7P62_23255) | 96115..97098 | + | 984 | WP_074399323.1 | XopE/AvrPphe family type III secretion system effector | - |
| A7P62_RS23260 (A7P62_23260) | 97323..98020 | - | 698 | Protein_97 | IS6 family transposase | - |
| A7P62_RS23265 (A7P62_23265) | 98066..98197 | - | 132 | WP_269202020.1 | IS3 family transposase ISMaq2 | Transposase |
| A7P62_RS23270 (A7P62_23270) | 98243..98362 | - | 120 | WP_155740534.1 | IS66 family transposase ISAzca2 | Transposase |
| A7P62_RS23275 (A7P62_23275) | 99029..99533 | + | 505 | Protein_100 | YopT-type cysteine protease domain-containing protein | - |
| A7P62_RS23280 (A7P62_23280) | 99714..100556 | + | 843 | WP_196766581.1 | XopAF/AvrXv3 family type III secretion system effector | - |
| A7P62_RS23285 (A7P62_23285) | 100938..101466 | + | 529 | Protein_102 | recombinase family protein | - |
| A7P62_RS23290 (A7P62_23290) | 101456..101710 | + | 255 | Protein_103 | DUF4158 domain-containing protein | - |
| A7P62_RS23295 (A7P62_23295) | 101922..103463 | - | 1542 | WP_064689886.1 | type III helper protein HopAK1 | - |
| A7P62_RS23300 (A7P62_23300) | 103955..104274 | + | 320 | Protein_105 | IS5 family transposase ISPs1 | Transposase |
| A7P62_RS23305 (A7P62_23305) | 104348..105595 | - | 1248 | WP_196766583.1 | type III effector | - |
| A7P62_RS23310 (A7P62_23310) | 105605..105997 | - | 393 | WP_074399289.1 | CesT family type III secretion system chaperone | - |
| A7P62_RS23315 (A7P62_23315) | 106514..106774 | - | 261 | Protein_108 | IS5 family transposase ISPa41 | Transposase |
| A7P62_RS23320 (A7P62_23320) | 106891..107070 | + | 180 | Protein_109 | IS3 family transposase ISBmu11 | Transposase |
| A7P62_RS23325 (A7P62_23325) | 107215..108246 | - | 1032 | WP_064689888.1 | tyrosine-type recombinase/integrase | - |
| A7P62_RS23335 (A7P62_23335) | 109976..111096 | + | 1121 | WP_155740608.1 | IS3 family transposase ISEhe4 | Transposase |
| A7P62_RS23340 (A7P62_23340) | 111284..112078 | + | 795 | WP_064691058.1 | ParA family protein | - |
| A7P62_RS23345 (A7P62_23345) | 112065..112316 | + | 252 | WP_128755156.1 | hypothetical protein | - |
| A7P62_RS23350 (A7P62_23350) | 112719..113753 | - | 1035 | WP_269202052.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| A7P62_RS23355 (A7P62_23355) | 113859..114062 | - | 204 | WP_231113947.1 | LysE family transporter | - |
| A7P62_RS23360 (A7P62_23360) | 114253..114465 | - | 213 | WP_231113948.1 | hypothetical protein | - |
| A7P62_RS23365 (A7P62_23365) | 114797..115903 | - | 1107 | WP_283841769.1 | MFS transporter | - |
| A7P62_RS23370 (A7P62_23370) | 116134..117276 | - | 1143 | WP_064691061.1 | epoxide hydrolase | - |
| A7P62_RS23375 (A7P62_23375) | 117381..117959 | - | 579 | WP_064691062.1 | DUF1697 domain-containing protein | - |
| A7P62_RS23380 (A7P62_23380) | 118421..118879 | + | 459 | WP_074399340.1 | MEKHLA domain-containing protein | - |
| A7P62_RS23385 (A7P62_23385) | 119093..119632 | - | 540 | WP_231113949.1 | site-specific integrase | - |
| A7P62_RS23390 (A7P62_23390) | 119682..119909 | - | 228 | Protein_123 | DNA polymerase V subunit UmuC | - |
| A7P62_RS23395 (A7P62_23395) | 119999..120376 | - | 378 | WP_064691064.1 | hypothetical protein | - |
| A7P62_RS23400 (A7P62_23400) | 120391..120714 | - | 324 | WP_064691065.1 | TrfB-related DNA-binding protein | - |
| A7P62_RS23405 (A7P62_23405) | 121219..121905 | + | 687 | WP_064691066.1 | replication initiation protein | - |
| A7P62_RS23410 (A7P62_23410) | 122754..123086 | + | 333 | WP_064691068.1 | hypothetical protein | - |
| A7P62_RS23415 (A7P62_23415) | 123247..123873 | - | 627 | WP_081276237.1 | hypothetical protein | - |
| A7P62_RS23420 (A7P62_23420) | 124811..125704 | + | 894 | WP_064691092.1 | integrase domain-containing protein | - |
| A7P62_RS23425 (A7P62_23425) | 126013..126360 | + | 348 | WP_064691070.1 | hypothetical protein | - |
| A7P62_RS23430 (A7P62_23430) | 126454..126795 | + | 342 | WP_064691071.1 | hypothetical protein | - |
| A7P62_RS23435 (A7P62_23435) | 126809..127153 | + | 345 | WP_064691072.1 | hypothetical protein | - |
| A7P62_RS23440 (A7P62_23440) | 127400..127831 | + | 432 | WP_231113950.1 | hypothetical protein | - |
| A7P62_RS23445 (A7P62_23445) | 127912..128523 | + | 612 | WP_064691074.1 | hypothetical protein | - |
| A7P62_RS23450 (A7P62_23450) | 128592..129188 | + | 597 | WP_064691075.1 | hypothetical protein | - |
| A7P62_RS23455 (A7P62_23455) | 129263..130249 | + | 987 | WP_064691076.1 | zincin-like metallopeptidase domain-containing protein | - |
| A7P62_RS23460 (A7P62_23460) | 130351..131197 | + | 847 | Protein_137 | DUF1281 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|