MGE detailed information
MGE type: Genomic_island MGE length: 11601 bp
Accession: NZ_CP122319 Location: 4016693..4028293 Organism: Escherichia coli strain BW25113 Replicon: chromosome
Accession: NZ_CP122319 Location: 4016693..4028293 Organism: Escherichia coli strain BW25113 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QCG47_RS19440 (4013508) | 4013508..4015193 | - | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| QCG47_RS19445 (4015396) | 4015396..4015518 | + | 123 | WP_120795387.1 | protein YneP | - |
| QCG47_RS19450 (4015484) | 4015484..4016641 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| QCG47_RS19455 (4016693) | 4016693..4018375 | - | 1683 | WP_001295684.1 | sulfatase | - |
| QCG47_RS19460 (4018777) | 4018777..4019538 | - | 762 | WP_000060495.1 | acid stress response transcriptional regulator YdeO | - |
| QCG47_RS19465 (4019613) | 4019613..4019810 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| QCG47_RS19470 (4020058) | 4020058..4022337 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| QCG47_RS19475 (4022671) | 4022671..4023585 | - | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| QCG47_RS19480 (4023644) | 4023644..4024147 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| QCG47_RS19485 (4024160) | 4024160..4024690 | - | 531 | WP_000876763.1 | Protein FimF | VF |
| QCG47_RS19490 (4024704) | 4024704..4025930 | - | 1227 | Protein_3786 | Outer membrane usher protein FimD | VF |
| QCG47_RS19495 (4026185) | 4026185..4026393 | - | 209 | Protein_3787 | AraC family transcriptional regulator | - |
| QCG47_RS19500 (4026705) | 4026705..4028027 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| QCG47_RS19505 (4028027) | 4028027..4028293 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.003 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0 |