MGE detailed information
MGE type: Genomic_island MGE length: 9049 bp
Accession: NZ_CP122319 Location: 2371809..2380857 Organism: Escherichia coli strain BW25113 Replicon: chromosome
Accession: NZ_CP122319 Location: 2371809..2380857 Organism: Escherichia coli strain BW25113 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QCG47_RS11340 (2368393) | 2368393..2369313 | + | 921 | Protein_2196 | Rpn family recombination-promoting nuclease/putative transposase | - |
| QCG47_RS11345 (2369557) | 2369557..2370969 | - | 1413 | WP_000199300.1 | PLP-dependent aminotransferase family protein | - |
| QCG47_RS11350 (2371146) | 2371146..2371310 | + | 165 | WP_000394280.1 | DUF1127 domain-containing protein | - |
| QCG47_RS11355 (2371809) | 2371809..2373317 | + | 1509 | Protein_2199 | protein YjiT | - |
| QCG47_RS11360 (2373314) | 2373314..2376250 | + | 2937 | Protein_2200 | hypothetical protein | - |
| QCG47_RS11365 (2376307) | 2376307..2377353 | - | 1047 | WP_000437621.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
| QCG47_RS11370 (2377353) | 2377353..2378732 | - | 1380 | WP_000443951.1 | 5-methylcytosine-specific restriction endonuclease subunit McrB | - |
| QCG47_RS11375 (2378894) | 2378894..2379235 | - | 342 | WP_000132601.1 | endoribonuclease SymE | Toxin Detail |
| - (2379230) | 2379230..2379306 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (2379230) | 2379230..2379306 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (2379230) | 2379230..2379306 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (2379230) | 2379230..2379306 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (2379230) | 2379230..2379306 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (2379230) | 2379230..2379306 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (2379230) | 2379230..2379306 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (2379230) | 2379230..2379306 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| QCG47_RS11380 (2379463) | 2379463..2380857 | - | 1395 | WP_001272447.1 | type I restriction-modification system specificity subunit | - |
| QCG47_RS11385 (2380854) | 2380854..2382443 | - | 1590 | WP_001063204.1 | type I restriction-modification system methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20090 | HG738867 | 4458009..4467057 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6352 | NC_000913 | 4572414..4581462 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21461 | NC_007779 | 4577094..4586142 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA6351 | NC_012759 | 4508921..4517969 | 0 | |
| Escherichia coli DH1 | Genomic island | TA27427 | NC_017638 | 4552192..4561240 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48706 | NZ_CP009273 | 4562231..4571279 | 0 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90501 | NZ_CP025520 | 3428612..3437660 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285035 | NZ_HG738867 | 4458009..4467057 | 0 |