MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP122317 Location: 3144617..3163869 Organism: Escherichia coli strain HT-948 Replicon: chromosome
Accession: NZ_CP122317 Location: 3144617..3163869 Organism: Escherichia coli strain HT-948 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QCG49_RS15060 (3140096) | 3140096..3140599 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| QCG49_RS15065 (3140612) | 3140612..3141142 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| QCG49_RS15070 (3141152) | 3141152..3143788 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| QCG49_RS15075 (3143855) | 3143855..3144580 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| QCG49_RS15080 (3144617) | 3144617..3145156 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| QCG49_RS15085 (3145221) | 3145221..3145769 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| QCG49_RS15090 (3146251) | 3146251..3146847 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| QCG49_RS15095 (3147325) | 3147325..3147927 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| QCG49_RS15100 (3149383) | 3149383..3150099 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| QCG49_RS15105 (3150119) | 3150119..3151225 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| QCG49_RS15110 (3151290) | 3151290..3152270 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| QCG49_RS15115 (3152380) | 3152380..3152585 | + | 206 | Protein_2942 | HNH endonuclease | - |
| QCG49_RS15120 (3152853) | 3152853..3154093 | - | 1241 | Protein_2943 | helicase YjhR | - |
| QCG49_RS15125 (3154209) | 3154209..3154340 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| QCG49_RS15130 (3154831) | 3154831..3155088 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| QCG49_RS15135 (3155100) | 3155100..3155645 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| QCG49_RS15140 (3155701) | 3155701..3156447 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| QCG49_RS15145 (3156616) | 3156616..3156834 | + | 219 | Protein_2948 | hypothetical protein | - |
| QCG49_RS15150 (3156872) | 3156872..3156988 | + | 117 | Protein_2949 | VOC family protein | - |
| QCG49_RS15155 (3157233) | 3157233..3158354 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| QCG49_RS15160 (3158351) | 3158351..3158629 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| QCG49_RS15165 (3158641) | 3158641..3159954 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| QCG49_RS15170 (3159967) | 3159967..3160773 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| QCG49_RS15175 (3160904) | 3160904..3161335 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| QCG49_RS15180 (3161347) | 3161347..3161979 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| QCG49_RS15185 (3161996) | 3161996..3162778 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| QCG49_RS15190 (3163081) | 3163081..3163869 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| QCG49_RS15195 (3163874) | 3163874..3164779 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| QCG49_RS15200 (3164790) | 3164790..3166757 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| QCG49_RS15205 (3166864) | 3166864..3168213 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|