MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP122315 Location: 1418769..1438021 Organism: Escherichia coli strain HT-947 Replicon: chromosome
Accession: NZ_CP122315 Location: 1418769..1438021 Organism: Escherichia coli strain HT-947 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QCG46_RS06700 (1414248) | 1414248..1414751 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| QCG46_RS06705 (1414764) | 1414764..1415294 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| QCG46_RS06710 (1415304) | 1415304..1417940 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| QCG46_RS06715 (1418007) | 1418007..1418732 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| QCG46_RS06720 (1418769) | 1418769..1419308 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| QCG46_RS06725 (1419373) | 1419373..1419921 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| QCG46_RS06730 (1420403) | 1420403..1420999 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| QCG46_RS06735 (1421477) | 1421477..1422079 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| QCG46_RS06740 (1423535) | 1423535..1424251 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| QCG46_RS06745 (1424271) | 1424271..1425377 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| QCG46_RS06750 (1425442) | 1425442..1426422 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| QCG46_RS06755 (1426532) | 1426532..1426737 | + | 206 | Protein_1307 | HNH endonuclease | - |
| QCG46_RS06760 (1427005) | 1427005..1428245 | - | 1241 | Protein_1308 | helicase YjhR | - |
| QCG46_RS06765 (1428361) | 1428361..1428492 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| QCG46_RS06770 (1428983) | 1428983..1429240 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| QCG46_RS06775 (1429252) | 1429252..1429797 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| QCG46_RS06780 (1429853) | 1429853..1430599 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| QCG46_RS06785 (1430768) | 1430768..1430986 | + | 219 | Protein_1313 | hypothetical protein | - |
| QCG46_RS06790 (1431024) | 1431024..1431140 | + | 117 | Protein_1314 | VOC family protein | - |
| QCG46_RS06795 (1431385) | 1431385..1432506 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| QCG46_RS06800 (1432503) | 1432503..1432781 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| QCG46_RS06805 (1432793) | 1432793..1434106 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| QCG46_RS06810 (1434119) | 1434119..1434925 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| QCG46_RS06815 (1435056) | 1435056..1435487 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| QCG46_RS06820 (1435499) | 1435499..1436131 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| QCG46_RS06825 (1436148) | 1436148..1436930 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| QCG46_RS06830 (1437233) | 1437233..1438021 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| QCG46_RS06835 (1438026) | 1438026..1438931 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| QCG46_RS06840 (1438942) | 1438942..1440909 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| QCG46_RS06845 (1441016) | 1441016..1442365 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|