MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 100729 bp
Accession: NZ_CP121679 Location: 3909474..4010202 Organism: Ancylobacter sp. WKF20 Replicon: chromosome
Accession: NZ_CP121679 Location: 3909474..4010202 Organism: Ancylobacter sp. WKF20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AncyloWKF20_RS18045 (AncyloWKF20_18045) | 3905106..3905516 | - | 411 | WP_267584133.1 | ribonuclease P protein component | - |
| AncyloWKF20_RS18050 (AncyloWKF20_18050) | 3905580..3905714 | - | 135 | WP_013165198.1 | 50S ribosomal protein L34 | - |
| AncyloWKF20_RS18055 (AncyloWKF20_18055) | 3906582..3907964 | + | 1383 | WP_279318020.1 | HAMP domain-containing sensor histidine kinase | - |
| AncyloWKF20_RS18060 (AncyloWKF20_18060) | 3908023..3909297 | + | 1275 | WP_279315344.1 | glycoside hydrolase family 2 TIM barrel-domain containing protein | - |
| AncyloWKF20_RS18070 (AncyloWKF20_18070) | 3909722..3909970 | + | 249 | WP_279315345.1 | LysR family transcriptional regulator | - |
| AncyloWKF20_RS18075 (AncyloWKF20_18075) | 3910176..3911090 | - | 915 | WP_279315346.1 | LysR family transcriptional regulator | - |
| AncyloWKF20_RS18080 (AncyloWKF20_18080) | 3911202..3911633 | + | 432 | WP_279315347.1 | DoxX family protein | - |
| AncyloWKF20_RS18085 (AncyloWKF20_18085) | 3911668..3912147 | + | 480 | WP_279315348.1 | hypothetical protein | - |
| AncyloWKF20_RS18090 (AncyloWKF20_18090) | 3912140..3912745 | + | 606 | WP_279315349.1 | TlpA disulfide reductase family protein | - |
| AncyloWKF20_RS18095 (AncyloWKF20_18095) | 3912785..3913248 | - | 464 | Protein_3564 | transposase | - |
| AncyloWKF20_RS18100 (AncyloWKF20_18100) | 3913391..3913504 | + | 114 | Protein_3565 | IS3 family transposase ISBcen15 | Transposase |
| AncyloWKF20_RS18105 (AncyloWKF20_18105) | 3913794..3914735 | - | 942 | WP_279315350.1 | D-2-hydroxyacid dehydrogenase | - |
| AncyloWKF20_RS18110 (AncyloWKF20_18110) | 3914895..3915785 | - | 891 | WP_279315351.1 | HTH-type transcriptional regulator CysL | VF |
| AncyloWKF20_RS18115 (AncyloWKF20_18115) | 3916004..3916984 | + | 981 | WP_279315352.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| AncyloWKF20_RS18120 (AncyloWKF20_18120) | 3917079..3917528 | + | 450 | WP_279315353.1 | tripartite tricarboxylate transporter TctB family protein | - |
| AncyloWKF20_RS18125 (AncyloWKF20_18125) | 3917538..3919043 | + | 1506 | WP_279315354.1 | tripartite tricarboxylate transporter permease | - |
| AncyloWKF20_RS18130 (AncyloWKF20_18130) | 3919095..3919478 | + | 384 | WP_279318021.1 | VOC family protein | - |
| AncyloWKF20_RS18135 (AncyloWKF20_18135) | 3919771..3921015 | + | 1245 | WP_279315355.1 | CaiB/BaiF CoA-transferase family protein | - |
| AncyloWKF20_RS18140 (AncyloWKF20_18140) | 3921012..3921971 | + | 960 | WP_279315356.1 | hydroxymethylglutaryl-CoA lyase | - |
| AncyloWKF20_RS18145 (AncyloWKF20_18145) | 3922243..3923160 | + | 918 | WP_279315357.1 | Hca operon transcriptional activator HcaR | VF |
| AncyloWKF20_RS18150 (AncyloWKF20_18150) | 3923120..3923392 | - | 273 | WP_279315358.1 | DUF2274 domain-containing protein | - |
| AncyloWKF20_RS18155 (AncyloWKF20_18155) | 3923395..3924576 | - | 1182 | WP_279315359.1 | hypothetical protein | VF |
| AncyloWKF20_RS18160 (AncyloWKF20_18160) | 3924573..3925556 | - | 984 | WP_279315360.1 | P-type conjugative transfer protein TrbG | - |
| AncyloWKF20_RS18165 (AncyloWKF20_18165) | 3925553..3926242 | - | 690 | WP_279315361.1 | conjugal transfer protein TrbF | - |
| AncyloWKF20_RS18170 (AncyloWKF20_18170) | 3926239..3927468 | - | 1230 | WP_279315362.1 | P-type conjugative transfer protein TrbL | - |
| AncyloWKF20_RS18175 (AncyloWKF20_18175) | 3927470..3927739 | - | 270 | WP_279315363.1 | putative entry exclusion protein TrbK-alt | - |
| AncyloWKF20_RS18180 (AncyloWKF20_18180) | 3927751..3928524 | - | 774 | WP_279315364.1 | P-type conjugative transfer protein TrbJ | - |
| AncyloWKF20_RS18185 (AncyloWKF20_18185) | 3928521..3930974 | - | 2454 | WP_279315365.1 | conjugal transfer protein TrbE | - |
| AncyloWKF20_RS18190 (AncyloWKF20_18190) | 3930988..3931257 | - | 270 | WP_279315366.1 | VirB3 family type IV secretion system protein | - |
| AncyloWKF20_RS18195 (AncyloWKF20_18195) | 3931257..3931559 | - | 303 | WP_279318022.1 | TrbC/VirB2 family protein | - |
| AncyloWKF20_RS18200 (AncyloWKF20_18200) | 3931586..3932554 | - | 969 | WP_279315367.1 | Type IV secretion system protein VirB11 | VF |
| AncyloWKF20_RS18205 (AncyloWKF20_18205) | 3932895..3934010 | + | 1116 | WP_279315368.1 | Fic family protein | - |
| AncyloWKF20_RS18210 (AncyloWKF20_18210) | 3934417..3935184 | - | 768 | WP_279315369.1 | 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX | VF |
| AncyloWKF20_RS18215 (AncyloWKF20_18215) | 3935279..3936787 | - | 1509 | WP_279315370.1 | amino acid permease | - |
| AncyloWKF20_RS18220 (AncyloWKF20_18220) | 3936934..3937785 | + | 852 | WP_279315371.1 | hypothetical protein | VF |
| AncyloWKF20_RS18225 (AncyloWKF20_18225) | 3937841..3939349 | - | 1509 | WP_279315372.1 | tripartite tricarboxylate transporter permease | - |
| AncyloWKF20_RS18230 (AncyloWKF20_18230) | 3939358..3939828 | - | 471 | WP_279315373.1 | tripartite tricarboxylate transporter TctB family protein | - |
| AncyloWKF20_RS18235 (AncyloWKF20_18235) | 3939965..3940933 | - | 969 | WP_279315374.1 | tripartite tricarboxylate transporter substrate-binding protein | - |
| AncyloWKF20_RS18240 (AncyloWKF20_18240) | 3941048..3942124 | - | 1077 | WP_279315375.1 | tartrate dehydrogenase | - |
| AncyloWKF20_RS18245 (AncyloWKF20_18245) | 3942477..3943391 | + | 915 | WP_279315376.1 | Hca operon transcriptional activator HcaR | VF |
| AncyloWKF20_RS18250 (AncyloWKF20_18250) | 3943775..3944236 | + | 462 | WP_279318051.1 | hypothetical protein | - |
| AncyloWKF20_RS18255 (AncyloWKF20_18255) | 3944577..3945233 | + | 657 | WP_279315377.1 | hypothetical protein | - |
| AncyloWKF20_RS18260 (AncyloWKF20_18260) | 3945271..3946299 | + | 1029 | WP_279315378.1 | hypothetical protein | - |
| AncyloWKF20_RS18270 (AncyloWKF20_18270) | 3947892..3948917 | - | 1026 | WP_279315379.1 | DUF2971 domain-containing protein | - |
| AncyloWKF20_RS18275 (AncyloWKF20_18275) | 3949003..3949218 | + | 216 | WP_279315380.1 | hypothetical protein | - |
| AncyloWKF20_RS18280 (AncyloWKF20_18280) | 3949335..3950240 | + | 906 | WP_279315381.1 | hypothetical protein | - |
| AncyloWKF20_RS18285 (AncyloWKF20_18285) | 3950657..3951445 | - | 789 | WP_279315382.1 | ImmA/IrrE family metallo-endopeptidase | - |
| AncyloWKF20_RS18290 (AncyloWKF20_18290) | 3951445..3951885 | - | 441 | WP_279315383.1 | hypothetical protein | - |
| AncyloWKF20_RS18295 (AncyloWKF20_18295) | 3951882..3952457 | - | 576 | WP_279315384.1 | RNA polymerase subunit sigma-24 | - |
| AncyloWKF20_RS18300 (AncyloWKF20_18300) | 3952461..3952895 | + | 435 | WP_279315385.1 | hypothetical protein | - |
| AncyloWKF20_RS18305 (AncyloWKF20_18305) | 3952906..3953163 | + | 258 | WP_279315386.1 | hypothetical protein | - |
| AncyloWKF20_RS18310 (AncyloWKF20_18310) | 3953479..3953925 | - | 447 | WP_279315387.1 | CopG family transcriptional regulator | - |
| AncyloWKF20_RS18315 (AncyloWKF20_18315) | 3953931..3955928 | - | 1998 | WP_279315388.1 | Conjugal transfer protein TraG | VF |
| AncyloWKF20_RS18320 (AncyloWKF20_18320) | 3955950..3957689 | - | 1740 | WP_279318023.1 | DUF3363 domain-containing protein | - |
| AncyloWKF20_RS18325 (AncyloWKF20_18325) | 3957933..3958595 | - | 663 | WP_279315389.1 | Membrane-bound lytic murein transglycosylase C | VF |
| AncyloWKF20_RS18330 (AncyloWKF20_18330) | 3958597..3959142 | - | 546 | WP_279315390.1 | conjugative transfer signal peptidase TraF | - |
| AncyloWKF20_RS18335 (AncyloWKF20_18335) | 3959139..3959660 | - | 522 | WP_279315391.1 | DUF2840 domain-containing protein | - |
| AncyloWKF20_RS18340 (AncyloWKF20_18340) | 3959657..3959908 | - | 252 | WP_279315392.1 | hypothetical protein | - |
| AncyloWKF20_RS18345 (AncyloWKF20_18345) | 3959905..3960558 | - | 654 | WP_279315393.1 | Chromosome-partitioning ATPase Soj | VF |
| AncyloWKF20_RS18350 (AncyloWKF20_18350) | 3960770..3961657 | - | 888 | WP_279315394.1 | replication initiator protein A | - |
| AncyloWKF20_RS18355 (AncyloWKF20_18355) | 3961664..3961945 | - | 282 | WP_279315395.1 | helix-turn-helix domain-containing protein | - |
| AncyloWKF20_RS18360 (AncyloWKF20_18360) | 3962068..3962478 | - | 411 | WP_279315396.1 | DUF2285 domain-containing protein | - |
| AncyloWKF20_RS18365 (AncyloWKF20_18365) | 3962459..3962800 | - | 342 | WP_279315397.1 | DUF6499 domain-containing protein | - |
| AncyloWKF20_RS18370 (AncyloWKF20_18370) | 3962920..3963186 | - | 267 | WP_279315398.1 | DUF2285 domain-containing protein | - |
| AncyloWKF20_RS18375 (AncyloWKF20_18375) | 3963434..3963682 | + | 249 | WP_279315399.1 | hypothetical protein | VF |
| AncyloWKF20_RS18380 (AncyloWKF20_18380) | 3963766..3964092 | - | 327 | WP_279315400.1 | DUF736 domain-containing protein | - |
| AncyloWKF20_RS18385 (AncyloWKF20_18385) | 3964722..3965159 | - | 438 | WP_279315401.1 | hypothetical protein | - |
| AncyloWKF20_RS18390 (AncyloWKF20_18390) | 3965283..3965450 | - | 168 | WP_018387548.1 | hypothetical protein | - |
| AncyloWKF20_RS18395 (AncyloWKF20_18395) | 3965689..3966111 | - | 423 | WP_279315402.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AncyloWKF20_RS18400 (AncyloWKF20_18400) | 3966108..3966362 | - | 255 | WP_279315403.1 | plasmid stabilization protein | Antitoxin Detail |
| AncyloWKF20_RS18405 (AncyloWKF20_18405) | 3966447..3967373 | - | 927 | WP_279315404.1 | DUF2493 domain-containing protein | - |
| AncyloWKF20_RS18410 (AncyloWKF20_18410) | 3967744..3968778 | - | 1035 | WP_279315405.1 | toprim domain-containing protein | - |
| AncyloWKF20_RS18415 (AncyloWKF20_18415) | 3968848..3970911 | - | 2064 | WP_279315406.1 | ParB/Srx family N-terminal domain-containing protein | - |
| AncyloWKF20_RS18420 (AncyloWKF20_18420) | 3971077..3972270 | - | 1194 | WP_279315407.1 | DUF932 domain-containing protein | - |
| AncyloWKF20_RS18425 (AncyloWKF20_18425) | 3972436..3973332 | - | 897 | WP_279315408.1 | MBL fold metallo-hydrolase | - |
| AncyloWKF20_RS18430 (AncyloWKF20_18430) | 3973403..3974047 | - | 645 | WP_279315409.1 | DsbA family protein | - |
| AncyloWKF20_RS18435 (AncyloWKF20_18435) | 3974107..3975072 | + | 966 | WP_279315410.1 | HTH-type transcriptional regulator DmlR | VF |
| AncyloWKF20_RS18440 (AncyloWKF20_18440) | 3975176..3975433 | - | 258 | Protein_3633 | IS630 family transposase ISAr1 | Transposase |
| AncyloWKF20_RS18445 (AncyloWKF20_18445) | 3975669..3976816 | + | 1148 | WP_279314132.1 | IS3 family transposase ISXau3 | Transposase |
| AncyloWKF20_RS18450 (AncyloWKF20_18450) | 3976870..3978075 | - | 1206 | WP_279315411.1 | Bcr/CflA family efflux MFS transporter | - |
| AncyloWKF20_RS18455 (AncyloWKF20_18455) | 3978068..3979495 | - | 1428 | WP_279315412.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| AncyloWKF20_RS18460 (AncyloWKF20_18460) | 3979655..3980734 | - | 1080 | WP_279315413.1 | AraC family transcriptional regulator | - |
| AncyloWKF20_RS18465 (AncyloWKF20_18465) | 3980900..3982306 | + | 1407 | WP_279315414.1 | aminotransferase | - |
| AncyloWKF20_RS18470 (AncyloWKF20_18470) | 3982315..3983415 | + | 1101 | WP_279315415.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| AncyloWKF20_RS18475 (AncyloWKF20_18475) | 3983460..3984521 | + | 1062 | WP_279315416.1 | ABC transporter substrate-binding protein | - |
| AncyloWKF20_RS18480 (AncyloWKF20_18480) | 3984549..3985736 | + | 1188 | WP_279315417.1 | ABC transporter permease | - |
| AncyloWKF20_RS18485 (AncyloWKF20_18485) | 3985733..3986554 | + | 822 | WP_279315418.1 | ABC transporter permease | - |
| AncyloWKF20_RS18490 (AncyloWKF20_18490) | 3986681..3987072 | + | 392 | Protein_3643 | hypothetical protein | - |
| AncyloWKF20_RS18495 (AncyloWKF20_18495) | 3987225..3988694 | + | 1470 | WP_279315419.1 | Anthranilate 3-monooxygenase oxygenase component | VF |
| AncyloWKF20_RS18500 (AncyloWKF20_18500) | 3988691..3989239 | + | 549 | WP_279315420.1 | flavin reductase family protein | - |
| AncyloWKF20_RS18505 (AncyloWKF20_18505) | 3989266..3990807 | + | 1542 | WP_279315421.1 | aldehyde dehydrogenase family protein | - |
| AncyloWKF20_RS18510 (AncyloWKF20_18510) | 3990820..3991740 | + | 921 | WP_279315422.1 | FAD binding domain-containing protein | - |
| AncyloWKF20_RS18515 (AncyloWKF20_18515) | 3991740..3992231 | + | 492 | WP_279315423.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| AncyloWKF20_RS18520 (AncyloWKF20_18520) | 3992228..3992965 | + | 738 | WP_279315424.1 | hypothetical protein | - |
| AncyloWKF20_RS18525 (AncyloWKF20_18525) | 3993023..3993964 | + | 942 | WP_279315425.1 | VOC family protein | - |
| AncyloWKF20_RS18530 (AncyloWKF20_18530) | 3994052..3994450 | + | 399 | WP_279315426.1 | cupin domain-containing protein | - |
| AncyloWKF20_RS18535 (AncyloWKF20_18535) | 3994478..3994882 | + | 405 | WP_279315427.1 | RidA family protein | - |
| AncyloWKF20_RS18540 (AncyloWKF20_18540) | 3994997..3995707 | + | 711 | WP_279315428.1 | GntR family transcriptional regulator | - |
| AncyloWKF20_RS18545 (AncyloWKF20_18545) | 3995789..3996088 | + | 300 | WP_279315429.1 | DUF1330 domain-containing protein | - |
| AncyloWKF20_RS18550 (AncyloWKF20_18550) | 3996131..3996784 | + | 654 | WP_279315430.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| AncyloWKF20_RS18555 (AncyloWKF20_18555) | 3996781..3997398 | - | 618 | WP_279315431.1 | hypothetical protein | - |
| AncyloWKF20_RS18560 (AncyloWKF20_18560) | 3997666..3998769 | + | 1104 | WP_279315432.1 | TMAO reductase system periplasmic protein TorT | - |
| AncyloWKF20_RS18565 (AncyloWKF20_18565) | 3998851..3999432 | + | 582 | WP_279315433.1 | carboxymuconolactone decarboxylase family protein | - |
| AncyloWKF20_RS18570 (AncyloWKF20_18570) | 3999410..4000021 | + | 612 | WP_279315434.1 | carboxymuconolactone decarboxylase family protein | - |
| AncyloWKF20_RS18575 (AncyloWKF20_18575) | 4000037..4001605 | + | 1569 | WP_279315435.1 | sugar ABC transporter ATP-binding protein | - |
| AncyloWKF20_RS18580 (AncyloWKF20_18580) | 4001607..4002632 | + | 1026 | WP_279315436.1 | ABC transporter permease | - |
| AncyloWKF20_RS18585 (AncyloWKF20_18585) | 4002668..4003045 | + | 378 | WP_279315437.1 | DoxX family protein | - |
| AncyloWKF20_RS18590 (AncyloWKF20_18590) | 4003127..4004545 | - | 1419 | WP_279315438.1 | GMC oxidoreductase | - |
| AncyloWKF20_RS18595 (AncyloWKF20_18595) | 4004781..4005623 | + | 843 | WP_279315439.1 | fumarylacetoacetate hydrolase family protein | - |
| AncyloWKF20_RS18600 (AncyloWKF20_18600) | 4005665..4006408 | + | 744 | WP_279315440.1 | ribonuclease activity regulator RraA | - |
| AncyloWKF20_RS18605 (AncyloWKF20_18605) | 4006387..4007298 | + | 912 | WP_279315441.1 | NmrA family NAD(P)-binding protein | - |
| AncyloWKF20_RS18610 (AncyloWKF20_18610) | 4007309..4007698 | + | 390 | WP_279315442.1 | ester cyclase | - |
| AncyloWKF20_RS18615 (AncyloWKF20_18615) | 4007866..4008558 | - | 693 | WP_279315443.1 | RES family NAD+ phosphorylase | - |
| AncyloWKF20_RS18620 (AncyloWKF20_18620) | 4008552..4008965 | - | 414 | WP_279315444.1 | MbcA/ParS/Xre antitoxin family protein | - |
| AncyloWKF20_RS18625 (AncyloWKF20_18625) | 4009045..4010024 | - | 980 | Protein_3670 | integrase | - |
| AncyloWKF20_RS18630 (AncyloWKF20_18630) | 4010299..4011216 | - | 918 | WP_279315445.1 | LysR substrate-binding domain-containing protein | - |
| AncyloWKF20_RS18635 (AncyloWKF20_18635) | 4011337..4012551 | - | 1215 | WP_279315446.1 | M24 family metallopeptidase | - |
| AncyloWKF20_RS18640 (AncyloWKF20_18640) | 4012883..4014433 | + | 1551 | WP_279315447.1 | glycerol-3-phosphate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|