MGE detailed information
MGE type: Prophage MGE length: 40160 bp
Accession: NZ_CP121480 Location: 1119229..1159388 Organism: Staphylococcus epidermidis strain 47FSE01 Replicon: chromosome
Accession: NZ_CP121480 Location: 1119229..1159388 Organism: Staphylococcus epidermidis strain 47FSE01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QA589_RS05270 | 1114905..1115666 | - | 762 | WP_001831944.1 | Fe-S cluster assembly ATPase SufC | - |
| QA589_RS05275 | 1115988..1116848 | + | 861 | WP_001831939.1 | DUF368 domain-containing protein | - |
| QA589_RS05280 | 1116914..1117105 | - | 192 | WP_001831967.1 | CsbD family protein | - |
| QA589_RS05285 | 1117280..1117438 | + | 159 | WP_001831893.1 | hypothetical protein | - |
| QA589_RS05290 | 1117708..1118520 | - | 813 | WP_002438990.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
| QA589_RS05295 | 1118541..1119236 | - | 696 | WP_278269604.1 | methionine ABC transporter permease | - |
| QA589_RS05300 | 1119229..1120254 | - | 1026 | WP_002456122.1 | Methionine import ATP-binding protein MetN 2 | VF |
| QA589_RS05305 | 1120507..1120803 | - | 297 | WP_001831936.1 | thioredoxin family protein | - |
| QA589_RS05310 | 1120796..1121182 | - | 387 | WP_001831968.1 | toprim domain-containing protein | - |
| QA589_RS05315 | 1121442..1121822 | - | 381 | WP_002438979.1 | glycine cleavage system protein GcvH | - |
| QA589_RS05320 | 1121996..1122349 | - | 354 | WP_001831965.1 | arsenate reductase family protein | - |
| QA589_RS05325 | 1122492..1122815 | + | 324 | WP_001831907.1 | thioredoxin family protein | - |
| QA589_RS05330 | 1122998..1123540 | - | 543 | WP_001831981.1 | nitroreductase | - |
| QA589_RS05335 | 1123621..1124337 | - | 717 | WP_001831974.1 | type I 3-dehydroquinate dehydratase | - |
| QA589_RS05340 | 1124498..1124920 | + | 423 | WP_002457221.1 | organic hydroperoxide resistance protein | - |
| QA589_RS05345 | 1125104..1125259 | - | 156 | WP_001829648.1 | IS1182 family transposase IS1272 | Transposase |
| QA589_RS05350 | 1125271..1125458 | - | 188 | Protein_1023 | hypothetical protein | - |
| QA589_RS05355 | 1125845..1126345 | + | 501 | WP_001829623.1 | GNAT family N-acetyltransferase | - |
| QA589_RS05360 | 1126616..1127203 | - | 588 | WP_001829615.1 | histidine phosphatase family protein | - |
| QA589_RS05365 | 1127417..1127653 | + | 237 | WP_002457224.1 | hypothetical protein | - |
| QA589_RS05370 | 1127645..1127848 | - | 204 | WP_002438966.1 | sterile alpha motif-like domain-containing protein | - |
| QA589_RS05375 | 1128257..1128514 | + | 258 | WP_002438963.1 | hypothetical protein | Antitoxin Detail |
| QA589_RS05380 | 1128539..1128727 | + | 189 | WP_001829569.1 | hypothetical protein | Toxin Detail |
| QA589_RS05385 | 1128917..1129471 | + | 555 | WP_001829566.1 | lipoprotein N-acylation protein LnsA | - |
| QA589_RS05390 | 1129531..1129764 | - | 234 | WP_001829664.1 | hypothetical protein | - |
| QA589_RS05395 | 1130048..1130794 | + | 747 | WP_002438959.1 | poly-gamma-glutamate hydrolase family protein | - |
| QA589_RS05400 | 1130893..1131177 | + | 285 | WP_001829635.1 | hypothetical protein | - |
| QA589_RS05405 | 1131201..1131425 | + | 225 | WP_001829613.1 | hypothetical protein | - |
| QA589_RS05410 | 1132046..1132246 | - | 201 | WP_001829681.1 | cold-shock protein | - |
| QA589_RS05415 | 1133612..1134553 | - | 942 | WP_001829688.1 | cation diffusion facilitator family transporter | - |
| QA589_RS05420 | 1134840..1135343 | + | 504 | WP_002438954.1 | DUF1440 domain-containing protein | - |
| QA589_RS05425 | 1136837..1137253 | + | 417 | WP_024050827.1 | glyoxalase | - |
| QA589_RS05430 | 1137473..1137817 | - | 345 | WP_001832602.1 | DUF4260 domain-containing protein | - |
| QA589_RS05435 | 1138044..1139351 | + | 1308 | WP_001832616.1 | potassium transporter TrkG | - |
| QA589_RS05440 | 1139964..1140197 | + | 234 | WP_001829658.1 | hypothetical protein | - |
| QA589_RS05445 | 1140455..1140625 | - | 171 | WP_001829642.1 | hypothetical protein | - |
| QA589_RS05450 | 1141360..1141890 | + | 531 | WP_278269606.1 | hypothetical protein | - |
| QA589_RS05455 | 1142034..1142213 | - | 180 | WP_001829655.1 | hypothetical protein | - |
| QA589_RS05460 | 1142364..1142810 | + | 447 | WP_161386362.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| QA589_RS05465 | 1142823..1143497 | + | 675 | WP_001829583.1 | hypothetical protein | - |
| QA589_RS05470 | 1143839..1144660 | - | 822 | WP_019235983.1 | hypothetical protein | - |
| QA589_RS05475 | 1144827..1145285 | - | 459 | WP_002455767.1 | GyrI-like domain-containing protein | - |
| QA589_RS05480 | 1145551..1146192 | - | 642 | WP_000855537.1 | hypothetical protein | ARG |
| QA589_RS05485 | 1146664..1147272 | + | 609 | WP_019235984.1 | hypothetical protein | - |
| QA589_RS05490 | 1147482..1148651 | - | 1170 | WP_225973901.1 | Abi family protein | - |
| QA589_RS05495 | 1148912..1149484 | - | 573 | WP_053016028.1 | terminase small subunit | - |
| QA589_RS05500 | 1149495..1149824 | - | 330 | WP_011276349.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| QA589_RS05505 | 1149821..1150258 | - | 438 | WP_011276350.1 | hypothetical protein | - |
| QA589_RS05510 | 1150313..1150522 | - | 210 | WP_011276351.1 | hypothetical protein | - |
| QA589_RS05515 | 1150522..1151112 | - | 591 | WP_011276352.1 | hypothetical protein | - |
| QA589_RS05520 | 1151190..1151522 | - | 333 | WP_069724969.1 | pathogenicity island protein | - |
| QA589_RS05525 | 1151935..1152519 | - | 585 | WP_069724970.1 | hypothetical protein | - |
| QA589_RS05530 | 1152516..1153160 | - | 645 | WP_069724971.1 | pathogenicity island protein | - |
| QA589_RS05535 | 1153162..1153518 | - | 357 | WP_002476289.1 | hypothetical protein | - |
| QA589_RS05540 | 1153767..1155137 | - | 1371 | WP_002476291.1 | DNA primase family protein | - |
| QA589_RS05545 | 1155149..1156018 | - | 870 | WP_069724972.1 | primase alpha helix C-terminal domain-containing protein | - |
| QA589_RS05550 | 1156107..1156412 | - | 306 | WP_011276359.1 | DUF1474 family protein | - |
| QA589_RS05555 | 1156427..1156630 | - | 204 | WP_069724973.1 | hypothetical protein | - |
| QA589_RS05560 | 1156635..1157039 | - | 405 | WP_069724974.1 | pathogenicity island protein | - |
| QA589_RS05565 | 1157043..1157243 | - | 201 | WP_002476297.1 | hypothetical protein | - |
| QA589_RS05570 | 1157256..1157474 | - | 219 | WP_069724975.1 | helix-turn-helix transcriptional regulator | - |
| QA589_RS05575 | 1157642..1158310 | + | 669 | WP_069724996.1 | helix-turn-helix transcriptional regulator | - |
| QA589_RS05580 | 1158291..1159388 | + | 1098 | WP_252919604.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QA589_RS05590 | 1159963..1160433 | - | 471 | WP_001829588.1 | SsrA-binding protein SmpB | - |
| QA589_RS05595 | 1160458..1162836 | - | 2379 | WP_002484702.1 | ribonuclease R | - |
| QA589_RS05600 | 1162871..1163611 | - | 741 | WP_001829672.1 | carboxylesterase | - |
| QA589_RS05605 | 1163912..1164145 | - | 234 | WP_001829669.1 | preprotein translocase subunit SecG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|