MGE detailed information
MGE type: IScluster/Tn MGE length: 29403 bp
Accession: NZ_CP121360 Location: 5745..35147 Organism: Escherichia coli strain rl0044 Replicon: plasmid pVP443
Accession: NZ_CP121360 Location: 5745..35147 Organism: Escherichia coli strain rl0044 Replicon: plasmid pVP443
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P9060_RS27960 (1263) | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| P9060_RS27965 (2366) | 2366..2660 | - | 295 | Protein_2 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| P9060_RS27970 (2647) | 2647..2897 | - | 251 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| P9060_RS27975 (3420) | 3420..3529 | - | 110 | Protein_4 | IS5/IS1182 family transposase | - |
| P9060_RS27980 (3980) | 3980..4222 | + | 243 | WP_050562259.1 | toxin-activating lysine-acyltransferase | - |
| P9060_RS27985 (4694) | 4694..4822 | + | 129 | Protein_6 | transcriptional regulator | - |
| P9060_RS27990 (4871) | 4871..5194 | + | 324 | WP_230909587.1 | MarR family transcriptional regulator | - |
| P9060_RS27995 (5541) | 5541..6664 | - | 1124 | Protein_8 | IS3 family transposase IS3F | Transposase |
| P9060_RS28000 (6734) | 6734..6907 | + | 174 | Protein_9 | IS3 family transposase | - |
| P9060_RS28005 (6985) | 6985..7652 | + | 668 | Protein_10 | IS3 family transposase ISKpn38 | Transposase |
| P9060_RS28010 (7680) | 7680..8443 | - | 764 | Protein_11 | IS3 family transposase IS2 | Transposase |
| P9060_RS28015 (8519) | 8519..8671 | + | 153 | Protein_12 | transposase | - |
| P9060_RS28020 (8829) | 8829..8930 | + | 102 | Protein_13 | restriction endonuclease subunit M | - |
| P9060_RS28025 (8998) | 8998..10533 | + | 1536 | WP_278242788.1 | hypothetical protein | VF |
| P9060_RS28030 (10649) | 10649..10927 | - | 279 | Protein_15 | transposase | - |
| P9060_RS28035 (10954) | 10954..12567 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| P9060_RS28040 (12598) | 12598..12948 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| P9060_RS28045 (12945) | 12945..13370 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| P9060_RS28050 (13456) | 13456..14299 | - | 844 | Protein_19 | IS3 family transposase | - |
| P9060_RS28055 (14687) | 14687..14902 | - | 216 | WP_000739296.1 | heat-stable enterotoxin ST-II | - |
| P9060_RS28060 (15379) | 15379..15958 | - | 580 | Protein_21 | IS256 family transposase | - |
| P9060_RS28065 (15984) | 15984..16283 | + | 300 | Protein_22 | IS3 family transposase | - |
| P9060_RS28070 (16474) | 16474..18051 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| P9060_RS28075 (18361) | 18361..18921 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| P9060_RS28080 (18925) | 18925..21891 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| P9060_RS28085 (21924) | 21924..22273 | + | 350 | Protein_26 | integrase core domain-containing protein | - |
| P9060_RS28090 (22365) | 22365..23336 | - | 972 | WP_001078349.1 | IS481 family transposase ISEc18 | Transposase |
| P9060_RS28095 (23548) | 23548..24261 | - | 714 | WP_001424997.1 | hypothetical protein | - |
| P9060_RS28100 (24650) | 24650..24854 | + | 205 | Protein_29 | IS110 family transposase | - |
| P9060_RS28105 (25128) | 25128..25904 | + | 777 | WP_042634421.1 | Heat-labile enterotoxin A chain | VF |
| P9060_RS28110 (25901) | 25901..26275 | + | 375 | WP_015675362.1 | Heat-labile enterotoxin B chain | VF |
| P9060_RS28115 (26623) | 26623..27019 | + | 397 | Protein_32 | ATP-binding protein | - |
| P9060_RS28120 (27146) | 27146..27990 | + | 845 | Protein_33 | IS3 family transposase | - |
| P9060_RS28125 (28272) | 28272..29348 | + | 1077 | WP_000907656.1 | IS110 family transposase ISEc21 | Transposase |
| P9060_RS28130 (29365) | 29365..29673 | + | 309 | Protein_35 | IS3 family transposase IS911 | Transposase |
| P9060_RS28135 (29680) | 29680..30409 | - | 730 | Protein_36 | 3'-5' exonuclease | - |
| P9060_RS28140 (30455) | 30455..30733 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| P9060_RS28145 (30733) | 30733..31002 | - | 270 | WP_000079930.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| P9060_RS28150 (31919) | 31919..32941 | - | 1023 | WP_000840938.1 | plasmid replication initiator RepA | - |
| P9060_RS28155 (32934) | 32934..33008 | - | 75 | WP_032319616.1 | RepA leader peptide Tap | - |
| P9060_RS28160 (33242) | 33242..33499 | - | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| P9060_RS28165 (33779) | 33779..33919 | - | 141 | WP_064717426.1 | Hok/Gef family protein | - |
| P9060_RS28170 (33979) | 33979..35147 | + | 1169 | WP_085959723.1 | IS3 family transposase ISLad1 | Transposase |
| - (35224) | 35224..35285 | + | 62 | NuclAT_1 | - | - |
| - (35224) | 35224..35285 | + | 62 | NuclAT_1 | - | - |
| - (35224) | 35224..35285 | + | 62 | NuclAT_1 | - | - |
| - (35224) | 35224..35285 | + | 62 | NuclAT_1 | - | - |
| P9060_RS28175 (35581) | 35581..35892 | + | 312 | WP_000765906.1 | hypothetical protein | - |
| P9060_RS28180 (36073) | 36073..36159 | - | 87 | Protein_45 | endonuclease | - |
| P9060_RS28185 (36403) | 36403..36618 | - | 216 | WP_032166857.1 | hypothetical protein | - |
| P9060_RS28190 (36754) | 36754..37314 | - | 561 | WP_000139309.1 | fertility inhibition protein FinO | - |
| P9060_RS28195 (37369) | 37369..38112 | - | 744 | WP_000205703.1 | conjugal transfer pilus acetylase TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|