MGE detailed information
MGE type: Prophage MGE length: 28872 bp
Accession: NZ_CP121356 Location: 4205387..4234258 Organism: Escherichia coli strain rl0044 Replicon: chromosome
Accession: NZ_CP121356 Location: 4205387..4234258 Organism: Escherichia coli strain rl0044 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P9060_RS21240 (4200792) | 4200792..4201151 | + | 360 | WP_063081702.1 | hypothetical protein | - |
| P9060_RS21245 (4201144) | 4201144..4201686 | - | 543 | WP_000284450.1 | plasmid pRiA4b ORF-3 family protein | - |
| P9060_RS21250 (4201807) | 4201807..4201992 | - | 186 | WP_000188903.1 | hypothetical protein | - |
| P9060_RS21255 (4202290) | 4202290..4202571 | - | 282 | WP_000617443.1 | PerC family transcriptional regulator | - |
| P9060_RS21260 (4203188) | 4203188..4204144 | + | 957 | WP_001528727.1 | hypothetical protein | - |
| P9060_RS21265 (4204157) | 4204157..4204594 | + | 438 | WP_000098670.1 | hypothetical protein | - |
| P9060_RS21270 (4205384) | 4205384..4205824 | + | 441 | WP_223201782.1 | hypothetical protein | - |
| P9060_RS21275 (4205884) | 4205884..4207989 | - | 2106 | WP_063082037.1 | hypothetical protein | - |
| P9060_RS21280 (4207989) | 4207989..4209455 | - | 1467 | WP_001405141.1 | phage DNA ejection protein | - |
| P9060_RS21285 (4209460) | 4209460..4209633 | - | 174 | WP_001018522.1 | hypothetical protein | - |
| P9060_RS21290 (4210218) | 4210218..4212974 | - | 2757 | WP_001244110.1 | TOPRIM and DUF927 domain-containing protein | - |
| P9060_RS21295 (4212987) | 4212987..4213589 | - | 603 | WP_001058739.1 | hypothetical protein | - |
| P9060_RS21300 (4213582) | 4213582..4213803 | - | 222 | WP_000181940.1 | hypothetical protein | - |
| P9060_RS21305 (4213800) | 4213800..4214063 | - | 264 | WP_001024675.1 | hypothetical protein | - |
| P9060_RS21310 (4214060) | 4214060..4214254 | - | 195 | WP_001065738.1 | hypothetical protein | - |
| P9060_RS21315 (4214458) | 4214458..4214652 | - | 195 | WP_001304881.1 | host cell division inhibitor Icd-like protein | - |
| P9060_RS21320 (4214679) | 4214679..4214888 | - | 210 | Protein_4180 | ash family protein | - |
| P9060_RS21325 (4215308) | 4215308..4215490 | - | 183 | WP_000042977.1 | DUF4222 domain-containing protein | - |
| P9060_RS21330 (4215483) | 4215483..4216316 | - | 834 | WP_001019368.1 | antA/AntB antirepressor family protein | - |
| P9060_RS21335 (4216329) | 4216329..4216760 | - | 432 | WP_000412541.1 | hypothetical protein | - |
| P9060_RS21340 (4216760) | 4216760..4216963 | - | 204 | WP_000035054.1 | AlpA family transcriptional regulator | - |
| P9060_RS21345 (4217011) | 4217011..4217400 | + | 390 | WP_225389441.1 | hypothetical protein | - |
| P9060_RS21350 (4217615) | 4217615..4218829 | - | 1215 | WP_000772644.1 | Prophage integrase IntS ; Integrase | Integrase |
| P9060_RS21360 (4219185) | 4219185..4220438 | - | 1254 | WP_000893279.1 | glutamate-5-semialdehyde dehydrogenase | - |
| P9060_RS21365 (4220450) | 4220450..4221553 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| P9060_RS21370 (4221841) | 4221841..4222896 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| P9060_RS21375 (4222935) | 4222935..4223336 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (4224054) | 4224054..4224134 | - | 81 | NuclAT_9 | - | - |
| - (4224054) | 4224054..4224134 | - | 81 | NuclAT_9 | - | - |
| - (4224054) | 4224054..4224134 | - | 81 | NuclAT_9 | - | - |
| - (4224054) | 4224054..4224134 | - | 81 | NuclAT_9 | - | - |
| P9060_RS21380 (4223394) | 4223394..4224638 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| P9060_RS21385 (4224730) | 4224730..4225188 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| P9060_RS21390 (4225449) | 4225449..4226906 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| P9060_RS21395 (4226963) | 4226963..4227484 | - | 522 | Protein_4194 | peptide chain release factor H | - |
| P9060_RS21400 (4227483) | 4227483..4227686 | - | 204 | Protein_4195 | RtcB family protein | - |
| P9060_RS21405 (4227932) | 4227932..4228384 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| P9060_RS21410 (4228394) | 4228394..4228792 | - | 399 | WP_001263490.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| P9060_RS21415 (4228795) | 4228795..4229088 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| P9060_RS21420 (4229140) | 4229140..4230195 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| P9060_RS21425 (4230266) | 4230266..4231051 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| P9060_RS21430 (4231023) | 4231023..4232735 | + | 1713 | Protein_4201 | Flagellar biosynthesis protein FlhA | VF |
| P9060_RS21435 (4232959) | 4232959..4233456 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| P9060_RS21440 (4233632) | 4233632..4234405 | - | 774 | WP_015675129.1 | hypothetical protein | VF |
| P9060_RS21445 (4234591) | 4234591..4234851 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| P9060_RS21450 (4234854) | 4234854..4235132 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| P9060_RS21455 (4235288) | 4235288..4236028 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| P9060_RS21460 (4235999) | 4235999..4236766 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| P9060_RS21465 (4236972) | 4236972..4237550 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|