MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 52968 bp
Accession: NZ_CP121294 Location: 1264691..1317658 Organism: Escherichia coli O155:H21 strain NWU_1 Replicon: chromosome
Accession: NZ_CP121294 Location: 1264691..1317658 Organism: Escherichia coli O155:H21 strain NWU_1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P9N54_RS06295 (1259742) | 1259742..1259966 | + | 225 | WP_001296778.1 | YdcH family protein | - |
| P9N54_RS06300 (1260029) | 1260029..1260565 | + | 537 | WP_000140877.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
| P9N54_RS06305 (1260560) | 1260560..1261540 | - | 981 | WP_001234054.1 | YdcK family protein | - |
| P9N54_RS06310 (1261664) | 1261664..1262656 | + | 993 | WP_001296725.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| P9N54_RS06315 (1262653) | 1262653..1263246 | + | 594 | WP_000586733.1 | tellurite resistance methyltransferase TehB | - |
| P9N54_RS06320 (1263549) | 1263549..1264217 | + | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| P9N54_RS06325 (1264316) | 1264316..1264678 | - | 363 | Protein_1243 | IS200/IS605 family transposase | - |
| P9N54_RS06330 (1264748) | 1264748..1265956 | + | 1209 | WP_001373192.1 | IS200-IS605 family transposase IS609 | Transposase |
| P9N54_RS06335 (1265996) | 1265996..1267171 | - | 1176 | WP_001236319.1 | BenE family transporter YdcO | - |
| P9N54_RS06340 (1267263) | 1267263..1267799 | + | 537 | WP_000429141.1 | DNA-binding transcriptional regulator SutR | - |
| P9N54_RS06345 (1267872) | 1267872..1269833 | + | 1962 | WP_001307191.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| P9N54_RS06350 (1269925) | 1269925..1270155 | - | 231 | WP_000494244.1 | YncJ family protein | - |
| P9N54_RS06355 (1270377) | 1270377..1270553 | + | 177 | WP_000813794.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| P9N54_RS06360 (1270599) | 1270599..1271015 | + | 417 | WP_136721302.1 | type II toxin-antitoxin system antitoxin HicB | Antitoxin Detail |
| P9N54_RS06365 (1271094) | 1271094..1272500 | + | 1407 | WP_000760629.1 | PLP-dependent aminotransferase family protein | - |
| P9N54_RS06370 (1272745) | 1272745..1273890 | + | 1146 | WP_000047456.1 | ABC transporter substrate-binding protein | - |
| P9N54_RS06375 (1273908) | 1273908..1274921 | + | 1014 | WP_000220396.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| P9N54_RS06380 (1274922) | 1274922..1275863 | + | 942 | WP_001251319.1 | ABC transporter permease | - |
| P9N54_RS06385 (1275853) | 1275853..1276647 | + | 795 | WP_000555481.1 | Inner membrane ABC transporter permease protein YdcV | VF |
| P9N54_RS06390 (1276669) | 1276669..1278093 | + | 1425 | WP_001163892.1 | aminobutyraldehyde dehydrogenase | - |
| P9N54_RS06395 (1278190) | 1278190..1278285 | - | 96 | WP_001303494.1 | stress response membrane protein YncL | - |
| P9N54_RS06400 (1278480) | 1278480..1278653 | + | 174 | WP_000061178.1 | orphan toxin OrtT | - |
| P9N54_RS06405 (1278739) | 1278739..1278972 | + | 234 | WP_000018633.1 | DUF2526 family protein YdcY | - |
| P9N54_RS06410 (1278973) | 1278973..1279422 | - | 450 | WP_001076535.1 | DMT family transporter | - |
| P9N54_RS06415 (1279419) | 1279419..1279937 | - | 519 | WP_001296723.1 | L-methionine sulfoximine/L-methionine sulfone acetyltransferase | - |
| P9N54_RS06420 (1280118) | 1280118..1281155 | + | 1038 | WP_000531452.1 | NADPH-dependent curcumin/dihydrocurcumin reductase | - |
| P9N54_RS06425 (1281353) | 1281353..1282018 | + | 666 | WP_001296777.1 | colanic acid/biofilm transcriptional regulator McbR | - |
| P9N54_RS06430 (1282054) | 1282054..1284156 | - | 2103 | WP_136721299.1 | Metal-pseudopaline receptor CntO | VF |
| P9N54_RS06435 (1284398) | 1284398..1285459 | + | 1062 | WP_000550663.1 | YncE family protein | - |
| P9N54_RS06440 (1285574) | 1285574..1287073 | - | 1500 | WP_001295649.1 | L-asparagine permease | - |
| P9N54_RS06445 (1287339) | 1287339..1287956 | + | 618 | WP_000598855.1 | glutathione S-transferase family protein | - |
| P9N54_RS06450 (1288032) | 1288032..1288244 | + | 213 | WP_000882235.1 | YncH family protein | - |
| P9N54_RS06455 (1289065) | 1289065..1290155 | + | 1091 | Protein_1269 | Actin cross-linking toxin VgrG1 | VF |
| P9N54_RS06460 (1290488) | 1290488..1290835 | + | 348 | WP_278234014.1 | hypothetical protein | - |
| P9N54_RS06465 (1291057) | 1291057..1293738 | + | 2682 | WP_278234015.1 | hypothetical protein | - |
| P9N54_RS06470 (1294383) | 1294383..1295597 | + | 1215 | WP_278234016.1 | Prophage integrase IntS ; Integrase | Integrase |
| P9N54_RS06475 (1295746) | 1295746..1296603 | + | 858 | WP_001412615.1 | DUF6387 family protein | - |
| P9N54_RS06480 (1296694) | 1296694..1296900 | + | 207 | WP_001075424.1 | AlpA family transcriptional regulator | - |
| P9N54_RS06485 (1297281) | 1297281..1298486 | + | 1206 | WP_278234017.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| P9N54_RS06490 (1298488) | 1298488..1299798 | + | 1311 | WP_049077743.1 | hypothetical protein ; Integrase | Integrase |
| P9N54_RS06495 (1299798) | 1299798..1301429 | + | 1632 | WP_278234018.1 | DNA-binding protein | - |
| P9N54_RS06500 (1301430) | 1301430..1301828 | + | 399 | WP_001052045.1 | hypothetical protein | - |
| P9N54_RS06505 (1301926) | 1301926..1302339 | + | 414 | WP_049077747.1 | hypothetical protein | - |
| P9N54_RS06510 (1302735) | 1302735..1303940 | + | 1206 | WP_278234019.1 | hypothetical protein | - |
| P9N54_RS06515 (1304019) | 1304019..1304321 | - | 303 | WP_148875172.1 | outer membrane protein assembly factor BamE | - |
| P9N54_RS06520 (1304423) | 1304423..1305091 | - | 669 | WP_278234020.1 | hypothetical protein | - |
| P9N54_RS06525 (1305402) | 1305402..1306673 | - | 1272 | WP_278234021.1 | relaxase/mobilization nuclease domain-containing protein | - |
| P9N54_RS06530 (1306678) | 1306678..1307079 | - | 402 | WP_278234022.1 | hypothetical protein | - |
| P9N54_RS06535 (1307345) | 1307345..1307548 | + | 204 | WP_148875168.1 | hypothetical protein | - |
| P9N54_RS06540 (1307575) | 1307575..1308381 | + | 807 | WP_278234023.1 | hypothetical protein | - |
| P9N54_RS06545 (1309346) | 1309346..1309618 | + | 273 | WP_148875166.1 | His-Xaa-Ser system protein HxsD | - |
| P9N54_RS06550 (1309618) | 1309618..1311006 | + | 1389 | WP_278234024.1 | His-Xaa-Ser system radical SAM maturase HxsB | - |
| P9N54_RS06555 (1310999) | 1310999..1312111 | + | 1113 | WP_148875165.1 | His-Xaa-Ser system radical SAM maturase HxsC | - |
| P9N54_RS06560 (1312108) | 1312108..1312740 | + | 633 | WP_097477499.1 | His-Xaa-Ser repeat protein HxsA | - |
| P9N54_RS06565 (1312761) | 1312761..1314365 | + | 1605 | WP_001737750.1 | DUF6119 family protein | - |
| P9N54_RS06570 (1314369) | 1314369..1315241 | - | 873 | WP_009652943.1 | plasmid partitioning protein RepB C-terminal domain-containing protein | - |
| P9N54_RS06575 (1315250) | 1315250..1316122 | - | 873 | WP_032673146.1 | ParB N-terminal domain-containing protein | - |
| P9N54_RS06580 (1316123) | 1316123..1317658 | - | 1536 | WP_278234025.1 | IS607 family transposase ISCbt3 | Transposase |
| P9N54_RS06585 (1318325) | 1318325..1318663 | - | 339 | Protein_1295 | LysR substrate-binding domain-containing protein | - |
| P9N54_RS06590 (1318714) | 1318714..1319670 | - | 957 | WP_000121354.1 | molybdenum cofactor insertion chaperone PaoD | - |
| P9N54_RS06595 (1319680) | 1319680..1321878 | - | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|