MGE detailed information
MGE type: Genomic_island MGE length: 77276 bp
Accession: NZ_CP121149 Location: 4432047..4509322 Organism: Escherichia coli strain E14 Replicon: chromosome
Accession: NZ_CP121149 Location: 4432047..4509322 Organism: Escherichia coli strain E14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1I99_RS21535 (4427418) | 4427418..4428602 | + | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| P1I99_RS21540 (4428752) | 4428752..4429762 | + | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| P1I99_RS21545 (4429858) | 4429858..4431984 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| P1I99_RS21550 (4432047) | 4432047..4433324 | + | 1278 | WP_001083368.1 | MFS transporter | - |
| P1I99_RS21555 (4433324) | 4433324..4434754 | + | 1431 | WP_000813678.1 | glycoside hydrolase family 32 protein | - |
| P1I99_RS21560 (4434949) | 4434949..4436343 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| P1I99_RS21565 (4436921) | 4436921..4437208 | - | 288 | Protein_4219 | integrase core domain-containing protein | - |
| P1I99_RS21570 (4437197) | 4437197..4437558 | - | 362 | Protein_4220 | IS1 family transposase IS1A | Transposase |
| P1I99_RS21575 (4437608) | 4437608..4438642 | + | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| P1I99_RS21580 (4438786) | 4438786..4440459 | - | 1674 | WP_025492097.1 | sulfatase-like hydrolase/transferase | - |
| P1I99_RS21585 (4440512) | 4440512..4440709 | - | 198 | WP_001238004.1 | hypothetical protein | - |
| P1I99_RS21590 (4440849) | 4440849..4441115 | - | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| P1I99_RS21595 (4441112) | 4441112..4442683 | - | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| P1I99_RS21600 (4442730) | 4442730..4443809 | - | 1080 | WP_001207396.1 | hypothetical protein | - |
| P1I99_RS21605 (4443858) | 4443858..4444754 | - | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| P1I99_RS21610 (4445174) | 4445174..4445911 | - | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| P1I99_RS21615 (4446141) | 4446141..4446319 | + | 179 | Protein_4229 | integrase | - |
| P1I99_RS21620 (4446542) | 4446542..4447438 | - | 897 | WP_000499115.1 | hypothetical protein | - |
| P1I99_RS21625 (4447438) | 4447438..4449060 | - | 1623 | WP_000778955.1 | AAA family ATPase | - |
| P1I99_RS21630 (4449069) | 4449069..4450211 | - | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| P1I99_RS21635 (4450208) | 4450208..4451842 | - | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| P1I99_RS21640 (4451906) | 4451906..4455319 | - | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| P1I99_RS21645 (4455927) | 4455927..4456441 | + | 515 | Protein_4235 | ISL3 family transposase ISEc38 | Transposase |
| P1I99_RS21650 (4456741) | 4456741..4457007 | - | 267 | WP_032153698.1 | MazG-like family protein | - |
| P1I99_RS21655 (4457474) | 4457474..4458556 | + | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| P1I99_RS21660 (4458559) | 4458559..4459503 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| P1I99_RS21665 (4459500) | 4459500..4460480 | - | 981 | WP_000174035.1 | thymidylate synthase | - |
| P1I99_RS21670 (4460648) | 4460648..4461809 | + | 1162 | Protein_4240 | IS3 family transposase IS3 | Transposase |
| P1I99_RS21675 (4461960) | 4461960..4463192 | + | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| P1I99_RS21680 (4463643) | 4463643..4463906 | - | 264 | Protein_4242 | hypothetical protein | VF |
| P1I99_RS21685 (4464113) | 4464113..4464427 | - | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| P1I99_RS21690 (4464850) | 4464850..4465128 | + | 279 | WP_001349530.1 | P fimbrial regulatory protein KS71A | VF |
| P1I99_RS21695 (4465062) | 4465062..4465718 | + | 657 | Protein_4245 | IS91-like element ISVsa3 family transposase | - |
| P1I99_RS21700 (4465749) | 4465749..4466633 | + | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| P1I99_RS21705 (4466850) | 4466850..4468064 | + | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| P1I99_RS21710 (4468092) | 4468092..4468397 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| P1I99_RS21715 (4468509) | 4468509..4468697 | + | 189 | Protein_4249 | IS91 family transposase | - |
| P1I99_RS21720 (4468664) | 4468664..4469863 | - | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| P1I99_RS21725 (4469969) | 4469969..4470619 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| P1I99_RS21730 (4470651) | 4470651..4470893 | - | 243 | WP_000844627.1 | transposase | - |
| P1I99_RS21735 (4471199) | 4471199..4472035 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| P1I99_RS21740 (4472035) | 4472035..4472838 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| P1I99_RS21745 (4472899) | 4472899..4473714 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| P1I99_RS21750 (4473955) | 4473955..4474527 | - | 573 | WP_247172500.1 | Tat pathway signal sequence protein | - |
| P1I99_RS21755 (4475390) | 4475390..4475565 | - | 176 | Protein_4257 | transposase | - |
| P1I99_RS21760 (4475754) | 4475754..4475930 | - | 177 | Protein_4258 | transketolase family protein | - |
| P1I99_RS21765 (4475990) | 4475990..4476681 | + | 692 | Protein_4259 | IS1 family transposase | - |
| P1I99_RS21770 (4477084) | 4477084..4477275 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| P1I99_RS21775 (4477344) | 4477344..4477592 | + | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| P1I99_RS21780 (4477611) | 4477611..4478159 | - | 549 | WP_032153702.1 | hypothetical protein | - |
| P1I99_RS21785 (4478428) | 4478428..4478664 | - | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| P1I99_RS21790 (4478733) | 4478733..4479305 | - | 573 | WP_032153703.1 | hypothetical protein | - |
| P1I99_RS21795 (4479320) | 4479320..4479469 | + | 150 | WP_001421645.1 | hypothetical protein | - |
| P1I99_RS21800 (4479589) | 4479589..4480155 | - | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| P1I99_RS21805 (4481752) | 4481752..4483356 | - | 1605 | WP_001067608.1 | YfjI family protein | - |
| P1I99_RS21810 (4483790) | 4483790..4483996 | + | 207 | WP_025492114.1 | hypothetical protein | - |
| P1I99_RS21815 (4484008) | 4484008..4484268 | - | 261 | WP_223362175.1 | hypothetical protein | - |
| P1I99_RS21820 (4484292) | 4484292..4484447 | + | 156 | WP_020923993.1 | hypothetical protein | - |
| P1I99_RS21825 (4484541) | 4484541..4485272 | - | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| P1I99_RS21830 (4486450) | 4486450..4486584 | - | 135 | WP_000268384.1 | hypothetical protein | - |
| P1I99_RS21835 (4487023) | 4487023..4487832 | + | 810 | WP_032153709.1 | hypothetical protein | - |
| P1I99_RS21840 (4487829) | 4487829..4488761 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| P1I99_RS21845 (4488868) | 4488868..4489752 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| P1I99_RS21850 (4489871) | 4489871..4490548 | + | 678 | WP_023155728.1 | hypothetical protein | - |
| P1I99_RS21855 (4490578) | 4490578..4490787 | + | 210 | WP_023155727.1 | DUF905 family protein | - |
| P1I99_RS21860 (4490878) | 4490878..4491696 | + | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| P1I99_RS21865 (4491788) | 4491788..4492273 | + | 486 | WP_032153711.1 | antirestriction protein | - |
| P1I99_RS21870 (4492289) | 4492289..4492765 | + | 477 | WP_001186715.1 | RadC family protein | - |
| P1I99_RS21875 (4492834) | 4492834..4493055 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| P1I99_RS21880 (4493135) | 4493135..4493509 | + | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | - |
| P1I99_RS21885 (4493556) | 4493556..4493825 | + | 270 | Protein_4283 | TA system toxin CbtA family protein | - |
| P1I99_RS21890 (4493827) | 4493827..4494048 | + | 222 | Protein_4284 | cupin fold metalloprotein, WbuC family | - |
| P1I99_RS21895 (4494095) | 4494095..4494970 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| P1I99_RS21900 (4495223) | 4495223..4496485 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| P1I99_RS21905 (4496658) | 4496658..4496783 | + | 126 | Protein_4287 | TA system toxin CbtA family protein | - |
| P1I99_RS21910 (4496780) | 4496780..4497271 | + | 492 | WP_023155722.1 | DUF5983 family protein | - |
| P1I99_RS21915 (4497283) | 4497283..4497480 | + | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| P1I99_RS21920 (4497565) | 4497565..4498431 | + | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| P1I99_RS21925 (4498503) | 4498503..4498766 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| P1I99_RS21930 (4498763) | 4498763..4499089 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| P1I99_RS21935 (4499972) | 4499972..4501509 | + | 1538 | Protein_4293 | lysine decarboxylation/transport transcriptional activator CadC | - |
| P1I99_RS21940 (4501875) | 4501875..4503209 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| P1I99_RS21945 (4503289) | 4503289..4505436 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| P1I99_RS21950 (4505495) | 4505495..4506952 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| P1I99_RS21955 (4507189) | 4507189..4508706 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| P1I99_RS21960 (4508825) | 4508825..4508998 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| P1I99_RS21965 (4509026) | 4509026..4509322 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| P1I99_RS21970 (4509549) | 4509549..4509821 | - | 273 | WP_000405649.1 | GNAT family N-acetyltransferase | - |
| P1I99_RS21975 (4509833) | 4509833..4510063 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| P1I99_RS21980 (4510244) | 4510244..4511875 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| P1I99_RS21985 (4511872) | 4511872..4512591 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|