MGE detailed information
MGE type: Genomic_island MGE length: 11169 bp
Accession: NZ_CP121087 Location: 3784067..3795235 Organism: Escherichia coli strain ST3 Replicon: chromosome
Accession: NZ_CP121087 Location: 3784067..3795235 Organism: Escherichia coli strain ST3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5670_RS18445 (3779068) | 3779068..3779502 | - | 435 | WP_000948818.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| P5670_RS18450 (3779520) | 3779520..3780398 | - | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| P5670_RS18455 (3780388) | 3780388..3781167 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| P5670_RS18460 (3781178) | 3781178..3781651 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| P5670_RS18465 (3781674) | 3781674..3782954 | - | 1281 | WP_000681943.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| P5670_RS18470 (3783203) | 3783203..3784012 | + | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| P5670_RS18475 (3784067) | 3784067..3784531 | - | 465 | WP_000347269.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| P5670_RS18480 (3784531) | 3784531..3784866 | - | 336 | WP_001309780.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| P5670_RS18485 (3785015) | 3785015..3786586 | - | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| P5670_RS18490 (3786961) | 3786961..3788295 | + | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| P5670_RS18495 (3788311) | 3788311..3789081 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| P5670_RS18500 (3789111) | 3789111..3790001 | + | 891 | WP_001377077.1 | 2-hydroxy-3-oxopropionate reductase | - |
| P5670_RS18505 (3790098) | 3790098..3791243 | + | 1146 | WP_001309778.1 | glycerate 2-kinase | - |
| P5670_RS18515 (3791760) | 3791760..3792947 | - | 1188 | WP_000075589.1 | YhaC family protein | - |
| P5670_RS18520 (3792969) | 3792969..3793508 | - | 540 | WP_000675750.1 | protein YhaB | - |
| P5670_RS18525 (3793764) | 3793764..3793982 | - | 219 | WP_001309776.1 | transcriptional activator TdcR | - |
| P5670_RS18530 (3794297) | 3794297..3795235 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| P5670_RS18535 (3795334) | 3795334..3796323 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| P5670_RS18540 (3796345) | 3796345..3797676 | + | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| P5670_RS18545 (3797702) | 3797702..3798910 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|