MGE detailed information
MGE type: Genomic_island MGE length: 16545 bp
Accession: NZ_CP121087 Location: 2462333..2478877 Organism: Escherichia coli strain ST3 Replicon: chromosome
Accession: NZ_CP121087 Location: 2462333..2478877 Organism: Escherichia coli strain ST3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5670_RS12115 (2458862) | 2458862..2459587 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| P5670_RS12120 (2459624) | 2459624..2460163 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| P5670_RS12125 (2460228) | 2460228..2460776 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| P5670_RS12130 (2461259) | 2461259..2461855 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| P5670_RS12135 (2462333) | 2462333..2462935 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| P5670_RS12140 (2464391) | 2464391..2465107 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| P5670_RS12145 (2465127) | 2465127..2466233 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| P5670_RS12150 (2466298) | 2466298..2467278 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| P5670_RS12155 (2467388) | 2467388..2467593 | + | 206 | Protein_2385 | HNH endonuclease | - |
| P5670_RS12160 (2467861) | 2467861..2469101 | - | 1241 | Protein_2386 | helicase YjhR | - |
| P5670_RS12165 (2469217) | 2469217..2469348 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| P5670_RS12170 (2469839) | 2469839..2470096 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| P5670_RS12175 (2470108) | 2470108..2470653 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| P5670_RS12180 (2470709) | 2470709..2471455 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| P5670_RS12185 (2471624) | 2471624..2471842 | + | 219 | Protein_2391 | hypothetical protein | - |
| P5670_RS12190 (2471880) | 2471880..2471996 | + | 117 | Protein_2392 | VOC family protein | - |
| P5670_RS12195 (2472241) | 2472241..2473362 | + | 1122 | WP_277967484.1 | M42 family metallopeptidase | - |
| P5670_RS12200 (2473359) | 2473359..2473637 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| P5670_RS12205 (2473649) | 2473649..2474962 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| P5670_RS12210 (2474975) | 2474975..2475781 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| P5670_RS12215 (2475912) | 2475912..2476343 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| P5670_RS12220 (2476355) | 2476355..2476987 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| P5670_RS12225 (2477004) | 2477004..2477786 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| P5670_RS12230 (2478089) | 2478089..2478877 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| P5670_RS12235 (2478882) | 2478882..2479787 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| P5670_RS12240 (2479798) | 2479798..2481765 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| P5670_RS12245 (2481872) | 2481872..2483221 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|