MGE detailed information
MGE type: Genomic_island MGE length: 10391 bp
Accession: NZ_CP121076 Location: 1013782..1024172 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R22.3740 Replicon: chromosome
Accession: NZ_CP121076 Location: 1013782..1024172 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R22.3740 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8I06_RS04815 (1008860) | 1008860..1009240 | + | 381 | WP_023993675.1 | DUF4440 domain-containing protein | - |
| P8I06_RS04820 (1009296) | 1009296..1011863 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| P8I06_RS04825 (1012022) | 1012022..1012543 | + | 522 | WP_023994250.1 | hypothetical protein | - |
| P8I06_RS04830 (1012714) | 1012714..1013370 | - | 657 | WP_000420451.1 | protein-serine/threonine phosphatase | - |
| P8I06_RS04835 (1013705) | 1013705..1013922 | + | 218 | Protein_946 | IS5 family transposase ISEcl3 | Transposase |
| P8I06_RS04840 (1013995) | 1013995..1014522 | - | 528 | WP_023994249.1 | GNAT family N-acetyltransferase | Toxin Detail |
| P8I06_RS04845 (1014519) | 1014519..1014809 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| P8I06_RS04850 (1015079) | 1015079..1015257 | - | 179 | Protein_949 | IS3 family transposase | - |
| P8I06_RS04855 (1015498) | 1015498..1015824 | + | 327 | WP_000393300.1 | hypothetical protein | - |
| P8I06_RS04860 (1016097) | 1016097..1016444 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| P8I06_RS04865 (1016429) | 1016429..1016878 | - | 450 | WP_000381612.1 | membrane protein | - |
| P8I06_RS04870 (1017310) | 1017310..1017753 | - | 444 | WP_023993678.1 | Type 3 secretion system pilotin | VF |
| P8I06_RS04875 (1018209) | 1018209..1018859 | + | 651 | WP_001728903.1 | Invasion protein InvF | VF |
| P8I06_RS04880 (1018856) | 1018856..1020544 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| P8I06_RS04885 (1020541) | 1020541..1021659 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| P8I06_RS04890 (1021684) | 1021684..1023741 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| P8I06_RS04895 (1023765) | 1023765..1024172 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| P8I06_RS04900 (1024169) | 1024169..1025464 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| P8I06_RS04905 (1025442) | 1025442..1025885 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| P8I06_RS04910 (1025885) | 1025885..1026895 | + | 1011 | WP_000503101.1 | SPI-1 type III secretion system protein SpaN | - |
| P8I06_RS04915 (1026895) | 1026895..1027806 | + | 912 | WP_000058741.1 | SPI-1 type III secretion system protein SpaO | - |
| P8I06_RS04920 (1027796) | 1027796..1028470 | + | 675 | WP_000526014.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| P8I06_RS04925 (1028496) | 1028496..1028756 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.008 |