MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 102400 bp
Accession: NZ_CP121070 Location: 1541294..1643693 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R22.0044 Replicon: chromosome
Accession: NZ_CP121070 Location: 1541294..1643693 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R22.0044 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8I10_RS07365 (1537067) | 1537067..1537954 | - | 888 | WP_001119554.1 | threonine/homoserine exporter RhtA | - |
| P8I10_RS07370 (1538308) | 1538308..1538823 | + | 516 | WP_000716763.1 | outer membrane protein OmpX | - |
| P8I10_RS07375 (1538886) | 1538886..1540466 | - | 1581 | WP_023993604.1 | phosphoethanolamine transferase | - |
| P8I10_RS07380 (1540731) | 1540731..1540859 | - | 129 | WP_058799727.1 | manganase accumulation protein MntS | - |
| P8I10_RS07385 (1541045) | 1541045..1541518 | + | 474 | WP_000533542.1 | manganese-binding transcriptional regulator MntR | - |
| P8I10_RS07390 (1541515) | 1541515..1542627 | + | 1113 | WP_023993606.1 | anion transporter | - |
| P8I10_RS07395 (1542671) | 1542671..1543591 | - | 921 | WP_001056404.1 | L,D-transpeptidase | - |
| P8I10_RS07400 (1543810) | 1543810..1545132 | + | 1323 | Protein_1443 | ABC-F family ATPase | - |
| P8I10_RS07405 (1545195) | 1545195..1545899 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| P8I10_RS07410 (1545961) | 1545961..1546521 | + | 561 | Protein_1445 | PAS domain-containing protein | - |
| P8I10_RS07415 (1546496) | 1546496..1547593 | - | 1098 | Protein_1446 | TonB-dependent receptor | - |
| P8I10_RS07420 (1547650) | 1547650..1548618 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| P8I10_RS07425 (1548653) | 1548653..1549528 | - | 876 | WP_013188475.1 | Beta-lactamase Toho-1 | ARG |
| P8I10_RS07430 (1549876) | 1549876..1550580 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| P8I10_RS07435 (1550901) | 1550901..1551029 | + | 129 | WP_002210551.1 | hypothetical protein | - |
| P8I10_RS07440 (1551093) | 1551093..1551260 | + | 168 | Protein_1451 | IS1380 family transposase | - |
| P8I10_RS07445 (1551310) | 1551310..1552014 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| P8I10_RS07450 (1552093) | 1552093..1552596 | + | 504 | WP_075322284.1 | sulfite exporter TauE/SafE family protein | - |
| P8I10_RS07455 (1552659) | 1552659..1553027 | + | 369 | WP_011117601.1 | winged helix-turn-helix domain-containing protein | - |
| P8I10_RS07460 (1553101) | 1553101..1554858 | - | 1758 | WP_011117602.1 | Arsenical pump-driving ATPase | VF |
| P8I10_RS07465 (1554879) | 1554879..1555241 | - | 363 | WP_011117603.1 | arsenic metallochaperone ArsD family protein | - |
| P8I10_RS07470 (1555317) | 1555317..1555862 | - | 546 | WP_001286342.1 | sigma-70 family RNA polymerase sigma factor | - |
| P8I10_RS07475 (1555871) | 1555871..1556521 | - | 651 | WP_001360294.1 | arsenical resistance protein ArsH | - |
| P8I10_RS07480 (1556682) | 1556682..1557005 | - | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| P8I10_RS07485 (1557110) | 1557110..1558147 | + | 1038 | WP_044502555.1 | permease | - |
| P8I10_RS07490 (1558440) | 1558440..1559057 | - | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| P8I10_RS07495 (1559248) | 1559248..1560804 | - | 1557 | WP_058649952.1 | AAA family ATPase | - |
| P8I10_RS07500 (1561067) | 1561067..1561657 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| P8I10_RS07505 (1561657) | 1561657..1561914 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| P8I10_RS07510 (1562268) | 1562268..1564406 | + | 2139 | WP_075322282.1 | AAA family ATPase | - |
| P8I10_RS07515 (1564568) | 1564568..1564984 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| P8I10_RS07520 (1564981) | 1564981..1565211 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| P8I10_RS07525 (1565519) | 1565519..1567084 | + | 1566 | WP_000741348.1 | AAA family ATPase | - |
| P8I10_RS07530 (1567141) | 1567141..1568010 | - | 870 | WP_000253407.1 | hypothetical protein | - |
| P8I10_RS07535 (1568012) | 1568012..1569100 | - | 1089 | WP_000952231.1 | hypothetical protein | - |
| P8I10_RS07540 (1569398) | 1569398..1570330 | - | 933 | WP_000991830.1 | S-4TM family putative pore-forming effector | - |
| P8I10_RS07545 (1570334) | 1570334..1571329 | - | 996 | WP_000246635.1 | hypothetical protein | - |
| P8I10_RS07550 (1572010) | 1572010..1572324 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| P8I10_RS07555 (1572386) | 1572386..1573156 | + | 771 | WP_001302622.1 | hypothetical protein | - |
| P8I10_RS07560 (1573201) | 1573201..1573986 | + | 786 | WP_077249540.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| P8I10_RS07565 (1574124) | 1574124..1574399 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| P8I10_RS07570 (1574393) | 1574393..1575037 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| P8I10_RS07575 (1575266) | 1575266..1576237 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| P8I10_RS07580 (1576242) | 1576242..1576634 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| P8I10_RS07585 (1576639) | 1576639..1577910 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| P8I10_RS07590 (1577910) | 1577910..1578347 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| P8I10_RS07595 (1578344) | 1578344..1578592 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| P8I10_RS07600 (1579010) | 1579010..1579912 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| P8I10_RS07605 (1579916) | 1579916..1580221 | + | 306 | WP_013307862.1 | hypothetical protein | - |
| P8I10_RS07610 (1580297) | 1580297..1580980 | + | 684 | WP_000086137.1 | DNA methylase | - |
| P8I10_RS07615 (1580981) | 1580981..1581202 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| P8I10_RS07620 (1581132) | 1581132..1581650 | + | 519 | WP_223168556.1 | DUF1380 family protein | - |
| P8I10_RS07625 (1581695) | 1581695..1582465 | + | 771 | WP_052980418.1 | hypothetical protein | - |
| P8I10_RS07630 (1582883) | 1582883..1583308 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| P8I10_RS07635 (1583355) | 1583355..1583777 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| P8I10_RS07640 (1583774) | 1583774..1583965 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| P8I10_RS07645 (1584299) | 1584299..1584367 | - | 69 | Protein_1492 | pilus protein | - |
| P8I10_RS07650 (1584736) | 1584736..1585263 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| P8I10_RS07655 (1585321) | 1585321..1585554 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| P8I10_RS07660 (1585613) | 1585613..1587571 | + | 1959 | WP_058649951.1 | ParB/RepB/Spo0J family partition protein | - |
| P8I10_RS07665 (1587626) | 1587626..1588060 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| P8I10_RS07670 (1588057) | 1588057..1588776 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| P8I10_RS07675 (1588773) | 1588773..1589369 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| P8I10_RS07680 (1589832) | 1589832..1590332 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| P8I10_RS07685 (1591061) | 1591061..1591495 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| P8I10_RS07690 (1591588) | 1591588..1591854 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| P8I10_RS07695 (1591919) | 1591919..1592833 | + | 915 | WP_000038334.1 | ISNCY family transposase ISRor2 | VF |
| P8I10_RS07700 (1592833) | 1592833..1593078 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| P8I10_RS07705 (1593109) | 1593109..1593360 | - | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| P8I10_RS07710 (1593940) | 1593940..1594788 | + | 849 | WP_058649950.1 | DUF4942 domain-containing protein | - |
| P8I10_RS07715 (1594874) | 1594874..1595209 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| P8I10_RS07720 (1595443) | 1595443..1595775 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| P8I10_RS07725 (1595786) | 1595786..1598485 | + | 2700 | WP_006855641.1 | IncI1-type relaxase NikB | - |
| P8I10_RS07730 (1598522) | 1598522..1600813 | - | 2292 | WP_001289275.1 | F-type conjugative transfer protein TrbC | - |
| P8I10_RS07735 (1600806) | 1600806..1601876 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| P8I10_RS07740 (1601895) | 1601895..1603103 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| P8I10_RS07745 (1603410) | 1603410..1604189 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (1604704) | 1604704..1604764 | - | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (1604704) | 1604704..1604764 | - | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (1604704) | 1604704..1604764 | - | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (1604704) | 1604704..1604764 | - | 61 | NuclAT_1 | - | Antitoxin Detail |
| P8I10_RS07750 (1604816) | 1604816..1604968 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| P8I10_RS07755 (1605040) | 1605040..1605291 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| P8I10_RS07760 (1605792) | 1605792..1605887 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| P8I10_RS07765 (1605952) | 1605952..1606128 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| P8I10_RS07770 (1606520) | 1606520..1606729 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| P8I10_RS07775 (1606801) | 1606801..1607463 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| P8I10_RS07780 (1607534) | 1607534..1609702 | - | 2169 | WP_058649949.1 | DotA/TraY family protein | - |
| P8I10_RS07785 (1609799) | 1609799..1610383 | - | 585 | WP_001037996.1 | IncI1-type conjugal transfer protein TraX | - |
| P8I10_RS07790 (1610412) | 1610412..1611614 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| P8I10_RS07795 (1611581) | 1611581..1612195 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| P8I10_RS07800 (1612195) | 1612195..1615239 | - | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| P8I10_RS07805 (1615329) | 1615329..1616129 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| P8I10_RS07810 (1616113) | 1616113..1616301 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| P8I10_RS07815 (1616365) | 1616365..1616769 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| P8I10_RS07820 (1616820) | 1616820..1617347 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| P8I10_RS07825 (1617347) | 1617347..1618051 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| P8I10_RS07830 (1618051) | 1618051..1619340 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| P8I10_RS07835 (1619343) | 1619343..1620326 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| P8I10_RS07840 (1620337) | 1620337..1621029 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| P8I10_RS07845 (1621026) | 1621026..1621373 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| P8I10_RS07850 (1621391) | 1621391..1625158 | - | 3768 | WP_058649948.1 | DUF5710 domain-containing protein | - |
| P8I10_RS07855 (1625248) | 1625248..1625799 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| P8I10_RS07860 (1625814) | 1625814..1626104 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| P8I10_RS07865 (1626101) | 1626101..1627249 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| P8I10_RS07870 (1627246) | 1627246..1628064 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| P8I10_RS07875 (1628061) | 1628061..1628519 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| P8I10_RS07880 (1628914) | 1628914..1629498 | - | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| P8I10_RS07885 (1629558) | 1629558..1630760 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| P8I10_RS07890 (1630846) | 1630846..1631670 | - | 825 | WP_058649947.1 | conjugal transfer protein TraE | - |
| P8I10_RS07895 (1631821) | 1631821..1632975 | - | 1155 | WP_001139955.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| P8I10_RS07900 (1633665) | 1633665..1633913 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| P8I10_RS07905 (1633910) | 1633910..1635202 | - | 1293 | WP_039719938.1 | hypothetical protein | VF |
| P8I10_RS07910 (1635202) | 1635202..1635858 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| P8I10_RS07915 (1635843) | 1635843..1636403 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| P8I10_RS07920 (1636413) | 1636413..1637027 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| P8I10_RS07925 (1637044) | 1637044..1638129 | - | 1086 | WP_001208803.1 | hypothetical protein | VF |
| P8I10_RS07930 (1638142) | 1638142..1639695 | - | 1554 | WP_000362204.1 | hypothetical protein | VF |
| P8I10_RS07935 (1639706) | 1639706..1640158 | - | 453 | WP_058649963.1 | hypothetical protein | VF |
| P8I10_RS07940 (1640145) | 1640145..1641440 | - | 1296 | WP_058649964.1 | type 4b pilus protein PilO2 | - |
| P8I10_RS07945 (1641433) | 1641433..1643115 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| P8I10_RS07950 (1643129) | 1643129..1643566 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| P8I10_RS07955 (1643566) | 1643566..1644633 | - | 1068 | WP_001360287.1 | type IV pilus biogenesis lipoprotein PilL | - |
| P8I10_RS07960 (1645605) | 1645605..1645865 | - | 261 | WP_023994105.1 | hypothetical protein | - |
| P8I10_RS07965 (1646126) | 1646126..1646380 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| P8I10_RS07970 (1646552) | 1646552..1647235 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| P8I10_RS07975 (1647488) | 1647488..1648021 | - | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|