MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP121003 Location: 834393..845748 Organism: Salmonella enterica strain 31A Replicon: chromosome
Accession: NZ_CP121003 Location: 834393..845748 Organism: Salmonella enterica strain 31A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P6590_RS03990 (829839) | 829839..830937 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| P6590_RS03995 (830947) | 830947..832464 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| P6590_RS04000 (832540) | 832540..833085 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| P6590_RS04005 (833350) | 833350..834108 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| P6590_RS04015 (834393) | 834393..835199 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| P6590_RS04020 (835479) | 835479..835730 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| P6590_RS04025 (835939) | 835939..836166 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| P6590_RS04030 (836166) | 836166..836564 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| P6590_RS04035 (837372) | 837372..837908 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| P6590_RS04040 (837955) | 837955..838587 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| P6590_RS04045 (839306) | 839306..839887 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| P6590_RS04050 (840007) | 840007..842490 | + | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| P6590_RS04055 (842531) | 842531..843274 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| P6590_RS04060 (843271) | 843271..844347 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| P6590_RS04065 (844491) | 844491..845003 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| P6590_RS04070 (844990) | 844990..845748 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| P6590_RS04075 (845958) | 845958..846806 | - | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| P6590_RS04080 (846928) | 846928..847200 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| P6590_RS04085 (847231) | 847231..848460 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| P6590_RS04090 (848602) | 848602..849057 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| P6590_RS04095 (849161) | 849161..850024 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |