MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95791 bp
Accession: NZ_CP120950 Location: 1..95791 Organism: Burkholderia contaminans strain 5080 Replicon: plasmid pBCO-1
Accession: NZ_CP120950 Location: 1..95791 Organism: Burkholderia contaminans strain 5080 Replicon: plasmid pBCO-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P4E65_RS38725 (P4E65_38725) | 1..1014 | + | 1014 | WP_223274457.1 | replication initiator protein A | - |
| P4E65_RS38730 (P4E65_38730) | 2264..3028 | + | 765 | WP_069301969.1 | hypothetical protein | - |
| P4E65_RS38735 (P4E65_38735) | 3072..3323 | + | 252 | WP_039341469.1 | hypothetical protein | - |
| P4E65_RS38740 (P4E65_38740) | 3320..3748 | + | 429 | WP_039341467.1 | hypothetical protein | - |
| P4E65_RS38745 (P4E65_38745) | 3791..4057 | + | 267 | WP_039341464.1 | hypothetical protein | - |
| P4E65_RS38750 (P4E65_38750) | 4111..4392 | + | 282 | WP_039341462.1 | hypothetical protein | - |
| P4E65_RS38755 (P4E65_38755) | 4409..4693 | + | 285 | WP_039341459.1 | DNA-binding protein Bv3F | VF |
| P4E65_RS38760 (P4E65_38760) | 4845..5171 | + | 327 | WP_039341454.1 | hypothetical protein | - |
| P4E65_RS38765 (P4E65_38765) | 5294..5863 | + | 570 | WP_069586055.1 | TrfB-related DNA-binding protein | - |
| P4E65_RS38770 (P4E65_38770) | 5860..6447 | + | 588 | WP_039341447.1 | hypothetical protein | - |
| P4E65_RS38775 (P4E65_38775) | 6469..6756 | + | 288 | WP_046196920.1 | hypothetical protein | - |
| P4E65_RS38780 (P4E65_38780) | 6762..6980 | + | 219 | WP_039341443.1 | hypothetical protein | - |
| P4E65_RS38785 (P4E65_38785) | 6992..7360 | + | 369 | WP_141715653.1 | DUF6283 family protein | - |
| P4E65_RS38790 (P4E65_38790) | 7443..7832 | - | 390 | Protein_13 | hypothetical protein | VF |
| P4E65_RS38795 (P4E65_38795) | 8224..8718 | + | 495 | WP_069586053.1 | hypothetical protein | VF |
| P4E65_RS38800 (P4E65_38800) | 8732..10504 | + | 1773 | WP_039341440.1 | hypothetical protein | - |
| P4E65_RS38805 (P4E65_38805) | 10501..11826 | + | 1326 | WP_039341437.1 | hypothetical protein | - |
| P4E65_RS38810 (P4E65_38810) | 11834..12751 | + | 918 | WP_141715652.1 | hypothetical protein | - |
| P4E65_RS38815 (P4E65_38815) | 12755..14701 | + | 1947 | WP_039341431.1 | ATPase, T2SS/T4P/T4SS family | - |
| P4E65_RS38820 (P4E65_38820) | 14754..15926 | + | 1173 | WP_039341428.1 | hypothetical protein | - |
| P4E65_RS38825 (P4E65_38825) | 16048..16677 | + | 630 | WP_039341425.1 | type 4 pilus major pilin | - |
| P4E65_RS38830 (P4E65_38830) | 16752..18206 | + | 1455 | WP_039341421.1 | hypothetical protein | - |
| P4E65_RS38835 (P4E65_38835) | 18367..19482 | - | 1116 | WP_069586052.1 | hypothetical protein | - |
| P4E65_RS38840 (P4E65_38840) | 19626..20300 | - | 675 | WP_141715651.1 | hypothetical protein | - |
| P4E65_RS38845 (P4E65_38845) | 20490..20681 | - | 192 | WP_039341418.1 | helix-turn-helix domain-containing protein | - |
| P4E65_RS38850 (P4E65_38850) | 20887..21099 | + | 213 | WP_039341415.1 | hypothetical protein | - |
| P4E65_RS38855 (P4E65_38855) | 21527..22489 | + | 963 | WP_039341411.1 | hypothetical protein | - |
| P4E65_RS38860 (P4E65_38860) | 22669..22905 | + | 237 | WP_039341407.1 | hypothetical protein | - |
| P4E65_RS38865 (P4E65_38865) | 23109..23381 | - | 273 | WP_223274498.1 | hypothetical protein | - |
| P4E65_RS38870 (P4E65_38870) | 24032..24379 | + | 348 | WP_039341404.1 | hypothetical protein | - |
| P4E65_RS38875 (P4E65_38875) | 24406..24600 | + | 195 | WP_157644984.1 | hypothetical protein | - |
| P4E65_RS38880 (P4E65_38880) | 24628..24852 | + | 225 | WP_070162874.1 | hypothetical protein | - |
| P4E65_RS38885 (P4E65_38885) | 24881..25012 | + | 132 | WP_256103123.1 | hypothetical protein | - |
| P4E65_RS38890 (P4E65_38890) | 25042..25221 | + | 180 | WP_046196928.1 | hypothetical protein | - |
| P4E65_RS38895 (P4E65_38895) | 25405..26256 | + | 852 | WP_046196930.1 | DUF4942 domain-containing protein | - |
| P4E65_RS38900 (P4E65_38900) | 26852..27334 | + | 483 | WP_083268431.1 | hypothetical protein | - |
| P4E65_RS38905 (P4E65_38905) | 27381..27671 | + | 291 | WP_039340493.1 | hypothetical protein | - |
| P4E65_RS38910 (P4E65_38910) | 27697..27927 | + | 231 | WP_039340495.1 | hypothetical protein | - |
| P4E65_RS38915 (P4E65_38915) | 27956..28120 | + | 165 | WP_175048468.1 | hypothetical protein | - |
| P4E65_RS38920 (P4E65_38920) | 28149..28343 | + | 195 | WP_039340496.1 | hypothetical protein | - |
| P4E65_RS38925 (P4E65_38925) | 29078..29365 | + | 288 | WP_046196906.1 | hypothetical protein | - |
| P4E65_RS38930 (P4E65_38930) | 29395..29583 | + | 189 | WP_039340170.1 | hypothetical protein | - |
| P4E65_RS38935 (P4E65_38935) | 29620..29841 | + | 222 | WP_070162875.1 | hypothetical protein | - |
| P4E65_RS38940 (P4E65_38940) | 29858..30088 | + | 231 | WP_039340171.1 | hypothetical protein | - |
| P4E65_RS38945 (P4E65_38945) | 30092..30304 | + | 213 | WP_039340165.1 | hypothetical protein | - |
| P4E65_RS38950 (P4E65_38950) | 30887..31720 | + | 834 | WP_039340166.1 | DUF932 domain-containing protein | - |
| P4E65_RS38955 (P4E65_38955) | 31770..32030 | + | 261 | WP_039340167.1 | hypothetical protein | - |
| P4E65_RS38960 (P4E65_38960) | 32020..32280 | + | 261 | WP_039340168.1 | hypothetical protein | - |
| P4E65_RS38965 (P4E65_38965) | 32831..33076 | + | 246 | WP_070162876.1 | hypothetical protein | - |
| P4E65_RS38970 (P4E65_38970) | 33093..33311 | + | 219 | WP_039341551.1 | DUF3717 domain-containing protein | - |
| P4E65_RS38975 (P4E65_38975) | 33331..34320 | + | 990 | WP_069586070.1 | hypothetical protein | - |
| P4E65_RS38980 (P4E65_38980) | 34511..34837 | + | 327 | WP_039341550.1 | hypothetical protein | - |
| P4E65_RS38985 (P4E65_38985) | 34914..35204 | + | 291 | WP_070162877.1 | hypothetical protein | - |
| P4E65_RS38990 (P4E65_38990) | 35226..35504 | + | 279 | WP_039341545.1 | hypothetical protein | - |
| P4E65_RS38995 (P4E65_38995) | 35857..36294 | - | 438 | WP_039341542.1 | hypothetical protein | - |
| P4E65_RS39000 (P4E65_39000) | 36291..37043 | - | 753 | WP_076841750.1 | hypothetical protein | - |
| P4E65_RS39005 (P4E65_39005) | 37046..37531 | - | 486 | WP_141715656.1 | hypothetical protein | - |
| P4E65_RS39010 (P4E65_39010) | 37986..38324 | + | 339 | WP_039341539.1 | hypothetical protein | - |
| P4E65_RS39015 (P4E65_39015) | 38321..39955 | + | 1635 | WP_070162878.1 | type IV secretion system DNA-binding domain-containing protein | - |
| P4E65_RS39020 (P4E65_39020) | 39955..43209 | + | 3255 | WP_069586067.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| P4E65_RS39025 (P4E65_39025) | 43449..44171 | + | 723 | WP_046196909.1 | hypothetical protein | - |
| P4E65_RS39030 (P4E65_39030) | 44140..44862 | + | 723 | WP_083268471.1 | hypothetical protein | VF |
| P4E65_RS39035 (P4E65_39035) | 45310..45696 | + | 387 | WP_039341532.1 | hypothetical protein | - |
| P4E65_RS39040 (P4E65_39040) | 45702..46037 | + | 336 | WP_039341530.1 | VirB3 family type IV secretion system protein | - |
| P4E65_RS39045 (P4E65_39045) | 46021..48570 | + | 2550 | WP_039341527.1 | Type IV secretion system protein virB4 | VF |
| P4E65_RS39050 (P4E65_39050) | 48576..49271 | + | 696 | WP_039341525.1 | type IV secretion system protein | - |
| P4E65_RS39055 (P4E65_39055) | 49295..49615 | + | 321 | WP_141715655.1 | hypothetical protein | - |
| P4E65_RS39060 (P4E65_39060) | 49628..50620 | + | 993 | WP_039341519.1 | type IV secretion system protein | - |
| P4E65_RS39065 (P4E65_39065) | 50807..51625 | + | 819 | WP_039341516.1 | type IV secretion system protein | - |
| P4E65_RS39070 (P4E65_39070) | 51622..52536 | + | 915 | WP_046196911.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| P4E65_RS39075 (P4E65_39075) | 52536..53819 | + | 1284 | WP_069586065.1 | hypothetical protein | VF |
| P4E65_RS39080 (P4E65_39080) | 53816..54931 | + | 1116 | WP_069586064.1 | Type IV secretion system protein VirB11 | VF |
| P4E65_RS39085 (P4E65_39085) | 54935..55075 | + | 141 | WP_157644980.1 | hypothetical protein | - |
| P4E65_RS39090 (P4E65_39090) | 55108..56589 | + | 1482 | WP_069586063.1 | hypothetical protein | - |
| P4E65_RS39095 (P4E65_39095) | 56796..57047 | + | 252 | WP_076841588.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| P4E65_RS39100 (P4E65_39100) | 57041..57391 | + | 351 | WP_039341512.1 | type II toxin-antitoxin system ChpB family toxin | Toxin Detail |
| P4E65_RS39105 (P4E65_39105) | 57404..57646 | + | 243 | WP_039341511.1 | hypothetical protein | - |
| P4E65_RS39110 (P4E65_39110) | 57695..58048 | + | 354 | WP_157644981.1 | hypothetical protein | - |
| P4E65_RS39115 (P4E65_39115) | 58020..58229 | + | 210 | WP_039341506.1 | hypothetical protein | - |
| P4E65_RS39120 (P4E65_39120) | 58301..58975 | + | 675 | WP_076841591.1 | hypothetical protein | - |
| P4E65_RS39125 (P4E65_39125) | 59020..59244 | + | 225 | WP_039341503.1 | hypothetical protein | - |
| P4E65_RS39130 (P4E65_39130) | 59327..59677 | + | 351 | WP_046196913.1 | hypothetical protein | - |
| P4E65_RS39135 (P4E65_39135) | 59686..59916 | + | 231 | WP_083268473.1 | hypothetical protein | - |
| P4E65_RS39140 (P4E65_39140) | 60066..60479 | + | 414 | WP_069586059.1 | hypothetical protein | - |
| P4E65_RS39145 (P4E65_39145) | 60531..60653 | + | 123 | WP_256103105.1 | hypothetical protein | - |
| P4E65_RS39150 (P4E65_39150) | 60757..61221 | + | 465 | WP_039341501.1 | hypothetical protein | - |
| P4E65_RS39155 (P4E65_39155) | 61237..61782 | + | 546 | WP_175035022.1 | hypothetical protein | VF |
| P4E65_RS39160 (P4E65_39160) | 62177..62971 | + | 795 | WP_039341497.1 | hypothetical protein | - |
| P4E65_RS39165 (P4E65_39165) | 62998..63471 | + | 474 | WP_141715654.1 | hypothetical protein | - |
| P4E65_RS39170 (P4E65_39170) | 63759..63935 | + | 177 | WP_157644982.1 | hypothetical protein | - |
| P4E65_RS39175 (P4E65_39175) | 64479..64772 | + | 294 | WP_039341491.1 | hypothetical protein | - |
| P4E65_RS39180 (P4E65_39180) | 64789..65253 | + | 465 | WP_039341488.1 | hypothetical protein | - |
| P4E65_RS39185 (P4E65_39185) | 65461..66546 | + | 1086 | WP_039341486.1 | hypothetical protein | - |
| P4E65_RS39190 (P4E65_39190) | 66606..66923 | + | 318 | WP_223075941.1 | hypothetical protein | - |
| P4E65_RS39195 (P4E65_39195) | 67029..67637 | + | 609 | WP_004393990.1 | TetR/AcrR family transcriptional regulator | - |
| P4E65_RS39200 (P4E65_39200) | 67634..68482 | + | 849 | Protein_95 | efflux RND transporter periplasmic adaptor subunit | - |
| P4E65_RS39205 (P4E65_39205) | 68619..69191 | - | 573 | WP_007180433.1 | hypothetical protein | - |
| P4E65_RS39210 (P4E65_39210) | 69268..69531 | - | 264 | WP_007180432.1 | hypothetical protein | - |
| P4E65_RS39215 (P4E65_39215) | 69528..69890 | - | 363 | WP_156903410.1 | hypothetical protein | - |
| P4E65_RS39220 (P4E65_39220) | 69887..71233 | - | 1347 | Protein_99 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| P4E65_RS39225 (P4E65_39225) | 71288..72601 | - | 1314 | WP_046543550.1 | IS256 family transposase IS931 | Transposase |
| P4E65_RS39230 (P4E65_39230) | 72716..74377 | - | 1662 | WP_131754383.1 | Nramp family divalent metal transporter | - |
| P4E65_RS39235 (P4E65_39235) | 74409..74561 | - | 153 | WP_157977922.1 | hypothetical protein | - |
| P4E65_RS39240 (P4E65_39240) | 75112..76053 | + | 942 | WP_114815190.1 | cation diffusion facilitator family transporter | - |
| P4E65_RS39245 (P4E65_39245) | 76560..78242 | + | 1683 | WP_011875634.1 | IS3 family transposase ISNoc1 | Transposase |
| P4E65_RS39250 (P4E65_39250) | 78245..79153 | + | 909 | WP_009687862.1 | TniB family NTP-binding protein | - |
| P4E65_RS39255 (P4E65_39255) | 79150..79491 | + | 342 | Protein_106 | TniQ family protein | - |
| P4E65_RS39260 (P4E65_39260) | 79756..81312 | + | 1557 | WP_011875599.1 | IS21 family transposase IS408 | Transposase |
| P4E65_RS39265 (P4E65_39265) | 81329..82078 | + | 750 | WP_006397350.1 | IS21 family transposase IS408 | Transposase |
| P4E65_RS39270 (P4E65_39270) | 82094..83059 | + | 966 | Protein_109 | TniQ family protein | - |
| P4E65_RS39275 (P4E65_39275) | 83121..83744 | + | 624 | WP_003155741.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| P4E65_RS39280 (P4E65_39280) | 83918..84802 | - | 885 | WP_080324167.1 | LysR family transcriptional regulator | - |
| P4E65_RS39285 (P4E65_39285) | 84799..85809 | - | 1011 | WP_009238667.1 | phosphonate dehydrogenase | - |
| P4E65_RS39290 (P4E65_39290) | 85834..86631 | - | 798 | WP_024569577.1 | phosphonate ABC transporter, permease protein PhnE | - |
| P4E65_RS39295 (P4E65_39295) | 86644..87504 | - | 861 | WP_038442281.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| P4E65_RS39300 (P4E65_39300) | 87507..88325 | - | 819 | WP_020200553.1 | Phosphate-import ATP-binding protein PhnC | VF |
| P4E65_RS39305 (P4E65_39305) | 88792..89349 | + | 558 | WP_001162010.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| P4E65_RS39310 (P4E65_39310) | 89352..92324 | + | 2973 | WP_003056098.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| P4E65_RS39315 (P4E65_39315) | 92426..92920 | + | 495 | WP_039341481.1 | hypothetical protein | - |
| P4E65_RS39320 (P4E65_39320) | 93152..93802 | + | 651 | WP_046196917.1 | hypothetical protein | - |
| P4E65_RS39325 (P4E65_39325) | 93792..94124 | + | 333 | WP_069301968.1 | hypothetical protein | - |
| P4E65_RS39330 (P4E65_39330) | 94459..94713 | + | 255 | WP_083264185.1 | hypothetical protein | - |
| P4E65_RS39335 (P4E65_39335) | 94710..95339 | + | 630 | WP_039341476.1 | zeta toxin family protein | - |
| P4E65_RS39340 (P4E65_39340) | 95344..95727 | + | 384 | WP_157644983.1 | Tn3 family transposase TnBth3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|