MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 64327 bp
Accession: NZ_CP120838 Location: 1..64327 Organism: Salmonella enterica subsp. enterica strain 21A Replicon: plasmid unnamed1
Accession: NZ_CP120838 Location: 1..64327 Organism: Salmonella enterica subsp. enterica strain 21A Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P4B21_RS22750 (P4B21_22750) | 453..1031 | - | 579 | WP_000085742.1 | hypothetical protein | - |
| P4B21_RS22755 (P4B21_22755) | 1028..1720 | - | 693 | WP_001038509.1 | Chaperone protein FaeE | VF |
| P4B21_RS22760 (P4B21_22760) | 1713..4121 | - | 2409 | WP_000007891.1 | Outer membrane usher protein FimD | VF |
| P4B21_RS22765 (P4B21_22765) | 4348..4872 | - | 525 | WP_000748204.1 | hypothetical protein | VF |
| P4B21_RS22770 (P4B21_22770) | 5147..5449 | - | 303 | WP_000979451.1 | Major pilu subunit operon regulatory protein PapB | VF |
| P4B21_RS22775 (P4B21_22775) | 5478..5789 | + | 312 | WP_015059605.1 | hypothetical protein | - |
| P4B21_RS22780 (P4B21_22780) | 6156..6542 | + | 387 | WP_000751876.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| P4B21_RS22785 (P4B21_22785) | 6595..6714 | + | 120 | Protein_8 | recombinase | - |
| P4B21_RS22790 (P4B21_22790) | 7083..8072 | - | 990 | WP_000461382.1 | RepB family plasmid replication initiator protein | - |
| P4B21_RS22795 (P4B21_22795) | 8566..8861 | - | 296 | Protein_10 | cytoplasmic protein | - |
| P4B21_RS22800 (P4B21_22800) | 8873..9301 | + | 429 | Protein_11 | hypothetical protein | - |
| P4B21_RS22805 (P4B21_22805) | 9345..9866 | - | 522 | WP_077681952.1 | hypothetical protein | - |
| P4B21_RS22810 (P4B21_22810) | 10542..10760 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| P4B21_RS22815 (P4B21_22815) | 10762..11067 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| P4B21_RS22820 (P4B21_22820) | 11069..11359 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| P4B21_RS22825 (P4B21_22825) | 11356..11877 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| P4B21_RS22830 (P4B21_22830) | 11912..12694 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| P4B21_RS22835 (P4B21_22835) | 12703..13416 | + | 714 | WP_000545756.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| P4B21_RS22840 (P4B21_22840) | 13441..13929 | + | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| P4B21_RS22845 (P4B21_22845) | 13923..14408 | + | 486 | WP_000905606.1 | membrane protein | - |
| P4B21_RS22850 (P4B21_22850) | 14685..14972 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| P4B21_RS22855 (P4B21_22855) | 15128..15688 | + | 561 | WP_000900095.1 | Invasin | VF |
| P4B21_RS22860 (P4B21_22860) | 15755..16105 | - | 351 | WP_001541541.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| P4B21_RS22865 (P4B21_22865) | 16162..16587 | + | 426 | WP_000064919.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| P4B21_RS22870 (P4B21_22870) | 16714..17364 | - | 651 | WP_001676646.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| P4B21_RS22875 (P4B21_22875) | 17626..18351 | - | 726 | WP_001122242.1 | MAPK phosphothreonine lyase | VF |
| P4B21_RS22880 (P4B21_22880) | 18632..20407 | - | 1776 | WP_001676648.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| P4B21_RS22885 (P4B21_22885) | 20459..20626 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| P4B21_RS22890 (P4B21_22890) | 20589..21356 | - | 768 | WP_001676649.1 | virulence protein SpvA | - |
| P4B21_RS22895 (P4B21_22895) | 21530..21694 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| P4B21_RS22900 (P4B21_22900) | 21868..22761 | - | 894 | WP_000346690.1 | virulence genes transcriptional activator SpvR | - |
| P4B21_RS22905 (P4B21_22905) | 23369..24406 | + | 1038 | WP_001121400.1 | IS630 family transposase ISEc33 | Transposase |
| P4B21_RS22910 (P4B21_22910) | 24595..25620 | - | 1026 | WP_077907510.1 | ExeA family protein | - |
| P4B21_RS22915 (P4B21_22915) | 25553..27217 | - | 1665 | WP_000098781.1 | IS481 family transposase ISAzs36 | Transposase |
| P4B21_RS22920 (P4B21_22920) | 27201..27761 | - | 561 | WP_001240330.1 | Tn3 family transposase TnBth3 | Transposase |
| P4B21_RS22925 (P4B21_22925) | 27968..28708 | - | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| P4B21_RS22930 (P4B21_22930) | 29363..29851 | - | 489 | WP_001135409.1 | hypothetical protein | - |
| P4B21_RS22935 (P4B21_22935) | 30109..31224 | + | 1116 | WP_001247117.1 | DNA-binding protein | - |
| P4B21_RS22940 (P4B21_22940) | 31310..31726 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| P4B21_RS22945 (P4B21_22945) | 31829..32245 | + | 417 | WP_000988946.1 | hypothetical protein | - |
| P4B21_RS22950 (P4B21_22950) | 32302..32907 | + | 606 | WP_000176303.1 | DUF2913 family protein | - |
| P4B21_RS22955 (P4B21_22955) | 32904..33845 | - | 942 | WP_000728919.1 | ISNCY family transposase ISSen7 | VF |
| P4B21_RS22960 (P4B21_22960) | 34260..35465 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| P4B21_RS22965 (P4B21_22965) | 35465..36439 | + | 975 | WP_000064277.1 | ParB family protein | - |
| P4B21_RS22970 (P4B21_22970) | 36521..37795 | - | 1275 | WP_000457542.1 | Y-family DNA polymerase | - |
| P4B21_RS22975 (P4B21_22975) | 37795..38217 | - | 423 | WP_000925628.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| P4B21_RS22980 (P4B21_22980) | 38518..40239 | + | 1722 | Protein_47 | ParB/RepB/Spo0J family partition protein | - |
| P4B21_RS22985 (P4B21_22985) | 40279..40380 | + | 102 | Protein_48 | conjugation system SOS inhibitor PsiB family protein | - |
| P4B21_RS22990 (P4B21_22990) | 40383..41039 | + | 657 | Protein_49 | plasmid SOS inhibition protein A | - |
| P4B21_RS22995 (P4B21_22995) | 41245..42105 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| P4B21_RS23000 (P4B21_23000) | 42288..42845 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| P4B21_RS23005 (P4B21_23005) | 43009..46014 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| P4B21_RS23010 (P4B21_23010) | 46243..46401 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| P4B21_RS23015 (P4B21_23015) | 46504..47322 | + | 819 | Protein_54 | DUF932 domain-containing protein | - |
| P4B21_RS23020 (P4B21_23020) | 47633..48103 | - | 471 | WP_015056628.1 | hypothetical protein | VF |
| P4B21_RS23025 (P4B21_23025) | 48519..48899 | + | 381 | WP_001151546.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| P4B21_RS23030 (P4B21_23030) | 49093..49778 | + | 686 | Protein_57 | PAS domain-containing protein | - |
| P4B21_RS23035 (P4B21_23035) | 49872..50099 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| P4B21_RS23040 (P4B21_23040) | 50141..50503 | + | 363 | WP_001274199.1 | type IV conjugative transfer system pilin TraA | - |
| P4B21_RS23045 (P4B21_23045) | 50518..50829 | + | 312 | WP_000012130.1 | type IV conjugative transfer system protein TraL | - |
| P4B21_RS23050 (P4B21_23050) | 50851..51417 | + | 567 | WP_001679518.1 | type IV conjugative transfer system protein TraE | - |
| P4B21_RS23055 (P4B21_23055) | 51404..52144 | + | 741 | WP_001230718.1 | type-F conjugative transfer system secretin TraK | - |
| P4B21_RS23060 (P4B21_23060) | 52144..53565 | + | 1422 | WP_000146697.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| P4B21_RS23065 (P4B21_23065) | 53555..54151 | + | 597 | WP_000527901.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| P4B21_RS23070 (P4B21_23070) | 54129..54353 | + | 225 | WP_016716015.1 | DUF2689 domain-containing protein | - |
| P4B21_RS23075 (P4B21_23075) | 54350..54864 | + | 515 | Protein_66 | type IV conjugative transfer system lipoprotein TraV | - |
| P4B21_RS23080 (P4B21_23080) | 54944..55366 | + | 423 | Protein_67 | fertility inhibition protein FinO | - |
| P4B21_RS23085 (P4B21_23085) | 55483..55764 | + | 282 | Protein_68 | disulfide bond formation protein DsbA | - |
| P4B21_RS23090 (P4B21_23090) | 56045..56605 | + | 561 | Protein_69 | phospholipase D family protein | - |
| P4B21_RS23095 (P4B21_23095) | 56716..56982 | + | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
| P4B21_RS23100 (P4B21_23100) | 57232..57309 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| P4B21_RS23105 (P4B21_23105) | 57290..58171 | + | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| P4B21_RS23110 (P4B21_23110) | 59054..59248 | + | 195 | Protein_73 | SdiA-regulated domain-containing protein | - |
| P4B21_RS23115 (P4B21_23115) | 59345..60091 | - | 747 | WP_000417897.1 | AraC family transcriptional regulator | - |
| P4B21_RS23120 (P4B21_23120) | 60357..60914 | - | 558 | WP_000725064.1 | Attachment invasion locus protein | VF |
| P4B21_RS23125 (P4B21_23125) | 61004..61849 | - | 846 | WP_001701740.1 | YjiK family protein | - |
| P4B21_RS23130 (P4B21_23130) | 61900..62046 | - | 147 | WP_001141717.1 | hypothetical protein | - |
| P4B21_RS23135 (P4B21_23135) | 62036..62692 | - | 657 | WP_077907617.1 | DsbA family protein | - |
| P4B21_RS23140 (P4B21_23140) | 62936..63286 | - | 351 | WP_000135399.1 | Transcriptional regulatory protein RcsB | VF |
| P4B21_RS23145 (P4B21_23145) | 63271..63483 | - | 213 | WP_000004289.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|