MGE detailed information
MGE type: Genomic_island MGE length: 42624 bp
Accession: NZ_CP120671 Location: 2897742..2940365 Organism: Salmonella enterica strain SC2020597 Replicon: chromosome
Accession: NZ_CP120671 Location: 2897742..2940365 Organism: Salmonella enterica strain SC2020597 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P4B13_RS13735 () | 2893994..2894536 | + | 543 | WP_000996817.1 | type VI secretion system contractile sheath small subunit | - |
| P4B13_RS13740 () | 2894560..2896068 | + | 1509 | WP_187789928.1 | type VI secretion system contractile sheath large subunit | - |
| P4B13_RS13745 () | 2896083..2896241 | + | 159 | WP_001584850.1 | BPSL0067 family protein | - |
| P4B13_RS13750 () | 2896368..2896700 | + | 333 | WP_077905251.1 | hypothetical protein | - |
| P4B13_RS13755 () | 2896954..2897439 | + | 486 | WP_000312802.1 | Hcp family type VI secretion system effector | - |
| P4B13_RS13760 () | 2897507..2897699 | + | 193 | Protein_2672 | type VI secretion system lipoprotein TssJ | - |
| P4B13_RS13765 () | 2897742..2898227 | + | 486 | WP_017465829.1 | type VI secretion system amidase effector protein Tae4 | - |
| P4B13_RS13770 () | 2898212..2898595 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| P4B13_RS13775 () | 2898738..2899223 | + | 486 | WP_000119443.1 | Protein hcp1 | VF |
| P4B13_RS13780 () | 2899290..2899826 | + | 537 | WP_001007105.1 | hypothetical protein | VF |
| P4B13_RS13785 () | 2899830..2901173 | + | 1344 | WP_000118732.1 | hypothetical protein | VF |
| P4B13_RS13790 () | 2901170..2902474 | + | 1305 | WP_000132483.1 | Peptidoglycan-associated lipoprotein | VF |
| P4B13_RS13795 () | 2902479..2903252 | + | 774 | WP_017465828.1 | Rap1a/Tai family immunity protein | - |
| P4B13_RS13800 () | 2903455..2903886 | + | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| P4B13_RS13805 () | 2903920..2907789 | + | 3870 | WP_017465826.1 | hypothetical protein | VF |
| P4B13_RS13810 () | 2907789..2908556 | + | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| P4B13_RS13815 () | 2908599..2909069 | + | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| P4B13_RS13820 () | 2909054..2909515 | + | 462 | WP_001684272.1 | hypothetical protein | - |
| P4B13_RS13825 () | 2909551..2909645 | + | 95 | Protein_2685 | cytoplasmic protein | - |
| P4B13_RS13830 () | 2909642..2910058 | + | 417 | WP_000759645.1 | DUF2195 family protein | - |
| P4B13_RS13835 () | 2910082..2910603 | + | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| P4B13_RS13840 () | 2911000..2913189 | + | 2190 | WP_017465824.1 | hypothetical protein | VF |
| P4B13_RS13845 () | 2913213..2913659 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| P4B13_RS13850 () | 2913678..2917766 | + | 4089 | WP_017465823.1 | RHS repeat-associated core domain-containing protein | - |
| P4B13_RS13855 () | 2917776..2918621 | + | 846 | WP_001084940.1 | hypothetical protein | - |
| P4B13_RS13860 () | 2918763..2919917 | + | 1155 | Protein_2692 | hypothetical protein | VF |
| P4B13_RS13865 () | 2919911..2920174 | + | 264 | WP_000932531.1 | hypothetical protein | - |
| P4B13_RS13870 () | 2920238..2920780 | + | 543 | Protein_2694 | hypothetical protein | VF |
| P4B13_RS13875 () | 2921133..2921552 | + | 420 | WP_031624782.1 | hypothetical protein | - |
| P4B13_RS13880 () | 2921704..2921991 | + | 288 | WP_223227914.1 | RHS repeat-associated core domain-containing protein | - |
| P4B13_RS13885 () | 2921922..2922194 | - | 273 | WP_072100733.1 | SymE family type I addiction module toxin | - |
| P4B13_RS13890 () | 2922185..2924698 | + | 2514 | Protein_2698 | RHS repeat-associated core domain-containing protein | - |
| P4B13_RS13895 () | 2925042..2925506 | + | 465 | WP_223227916.1 | hypothetical protein | - |
| P4B13_RS13900 () | 2925643..2926947 | + | 1305 | Protein_2700 | hypothetical protein | VF |
| P4B13_RS13905 () | 2926944..2927378 | + | 435 | WP_000789494.1 | hypothetical protein | - |
| P4B13_RS13910 () | 2927425..2927688 | - | 264 | WP_000994215.1 | hypothetical protein | Toxin Detail |
| - | 2927435..2927845 | + | 411 | - | - | Antitoxin Detail |
| P4B13_RS13915 () | 2927930..2928067 | + | 138 | WP_231391191.1 | hypothetical protein | - |
| P4B13_RS13920 () | 2928058..2928366 | + | 309 | WP_166427842.1 | hypothetical protein | - |
| P4B13_RS13925 () | 2928359..2928826 | + | 468 | WP_001284951.1 | Imm42 family immunity protein | - |
| P4B13_RS13930 () | 2928891..2929064 | - | 174 | WP_001531381.1 | hypothetical protein | - |
| P4B13_RS13935 () | 2929117..2929818 | + | 702 | Protein_2707 | integrase core domain-containing protein | - |
| P4B13_RS13940 () | 2930613..2931107 | + | 495 | WP_187789901.1 | hypothetical protein | - |
| P4B13_RS13945 () | 2931240..2931737 | + | 498 | WP_107919743.1 | Saf-pilin pilus formation protein SafA | - |
| P4B13_RS13950 () | 2931812..2932552 | + | 741 | WP_017465813.1 | Chaperone protein caf1M | VF |
| P4B13_RS13955 () | 2932576..2935086 | + | 2511 | WP_065680806.1 | F1 capsule-anchoring protein | VF |
| P4B13_RS13960 () | 2935108..2935578 | + | 471 | WP_017465811.1 | AfaD family invasin | - |
| P4B13_RS13965 () | 2935984..2936805 | + | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| P4B13_RS13970 () | 2936888..2937128 | + | 241 | Protein_2714 | PerC family transcriptional regulator | - |
| P4B13_RS13975 () | 2937622..2938569 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| P4B13_RS13980 () | 2938689..2938904 | + | 216 | WP_001575654.1 | hypothetical protein | - |
| P4B13_RS13985 () | 2938908..2939627 | - | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| P4B13_RS13990 () | 2939958..2940365 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| P4B13_RS13995 () | 2940675..2941442 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| P4B13_RS14000 () | 2941551..2943995 | - | 2445 | WP_017465810.1 | acyl-CoA dehydrogenase FadE | - |
| P4B13_RS14005 () | 2944235..2944813 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|