MGE detailed information
MGE type: Prophage MGE length: 80677 bp
Accession: NZ_CP120633 Location: 5017698..5098374 Organism: Escherichia coli strain USVAST219 Replicon: chromosome
Accession: NZ_CP120633 Location: 5017698..5098374 Organism: Escherichia coli strain USVAST219 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P6O79_RS24475 (5013468) | 5013468..5015120 | - | 1653 | WP_000458841.1 | hydroxylamine reductase | - |
| P6O79_RS24480 (5015264) | 5015264..5016163 | - | 900 | WP_000491137.1 | L-lysine exporter LysO | - |
| P6O79_RS24485 (5016578) | 5016578..5017273 | - | 696 | WP_000488716.1 | aquaporin Z | - |
| P6O79_RS24490 (5017698) | 5017698..5019356 | + | 1659 | WP_000599803.1 | ATP-dependent endonuclease | - |
| P6O79_RS24495 (5019353) | 5019353..5020309 | - | 957 | WP_001351020.1 | VirK/YbjX family protein | - |
| P6O79_RS24500 (5020460) | 5020460..5021575 | + | 1116 | WP_000746478.1 | macrolide transporter subunit MacA | - |
| P6O79_RS24505 (5021572) | 5021572..5023518 | + | 1947 | WP_000188152.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| P6O79_RS24510 (5023591) | 5023591..5023815 | - | 225 | WP_000410785.1 | cold shock-like protein CspD | - |
| P6O79_RS24515 (5023965) | 5023965..5024039 | + | 75 | WP_001406719.1 | protein YljB | - |
| P6O79_RS24520 (5024220) | 5024220..5025458 | + | 1239 | WP_001576601.1 | hypothetical protein ; Integrase | Integrase |
| P6O79_RS24525 (5025868) | 5025868..5026077 | + | 210 | WP_001206970.1 | AlpA family phage regulatory protein | - |
| P6O79_RS24530 (5026421) | 5026421..5026600 | - | 180 | WP_000190457.1 | YlcI/YnfO family protein | - |
| P6O79_RS24535 (5026794) | 5026794..5026997 | + | 204 | WP_001576602.1 | host cell division inhibitor Icd-like protein | - |
| P6O79_RS24540 (5026990) | 5026990..5027217 | + | 228 | WP_001576603.1 | hypothetical protein | - |
| P6O79_RS24545 (5027223) | 5027223..5027522 | + | 300 | WP_000770153.1 | DUF4222 domain-containing protein | - |
| P6O79_RS24550 (5027519) | 5027519..5029267 | + | 1749 | WP_001576604.1 | DUF5906 domain-containing protein | - |
| P6O79_RS24555 (5029618) | 5029618..5029869 | + | 252 | WP_024187906.1 | hypothetical protein | - |
| P6O79_RS24560 (5029866) | 5029866..5030291 | + | 426 | WP_001576606.1 | single-stranded DNA-binding protein | - |
| P6O79_RS24565 (5030314) | 5030314..5030556 | + | 243 | WP_000142167.1 | hypothetical protein | - |
| P6O79_RS24570 (5030591) | 5030591..5031097 | - | 507 | WP_001053662.1 | hypothetical protein | - |
| P6O79_RS24575 (5031384) | 5031384..5032553 | + | 1170 | WP_000733253.1 | phage major capsid protein | - |
| P6O79_RS24580 (5032608) | 5032608..5033168 | + | 561 | WP_001576607.1 | HK97 family phage prohead protease | - |
| P6O79_RS24585 (5033170) | 5033170..5034384 | + | 1215 | WP_000270251.1 | phage portal protein | - |
| P6O79_RS24590 (5034377) | 5034377..5034679 | + | 303 | WP_001576608.1 | head-tail connector protein | - |
| P6O79_RS24595 (5034679) | 5034679..5035119 | + | 441 | WP_001576609.1 | HNH endonuclease | - |
| P6O79_RS24600 (5035103) | 5035103..5035288 | + | 186 | WP_072256913.1 | hypothetical protein | - |
| P6O79_RS24605 (5035408) | 5035408..5035764 | + | 357 | WP_000113645.1 | phage terminase small subunit P27 family | - |
| P6O79_RS24610 (5035748) | 5035748..5037409 | + | 1662 | WP_001576610.1 | terminase large subunit | - |
| P6O79_RS24615 (5037415) | 5037415..5037699 | + | 285 | WP_024187907.1 | hypothetical protein | - |
| P6O79_RS24620 (5038626) | 5038626..5038946 | + | 321 | WP_000520781.1 | ATP-dependent Clp protease adapter ClpS | - |
| P6O79_RS24625 (5038977) | 5038977..5041253 | + | 2277 | WP_000934041.1 | ATP-dependent Clp protease ATP-binding subunit ClpA | VF |
| P6O79_RS24630 (5041771) | 5041771..5042973 | + | 1203 | WP_021543670.1 | Prophage integrase IntA ; Integrase | Integrase |
| P6O79_RS24635 (5043160) | 5043160..5044977 | - | 1818 | WP_021543671.1 | hypothetical protein | - |
| P6O79_RS24640 (5045174) | 5045174..5045865 | + | 692 | Protein_4813 | IS1 family transposase | - |
| P6O79_RS24645 (5046089) | 5046089..5046385 | + | 297 | WP_001303889.1 | AlpA family transcriptional regulator | - |
| P6O79_RS24650 (5046693) | 5046693..5046809 | + | 117 | WP_001451890.1 | hypothetical protein | - |
| P6O79_RS24655 (5047028) | 5047028..5048461 | + | 1434 | WP_000335702.1 | YfjI family protein | - |
| P6O79_RS24660 (5049282) | 5049282..5049845 | + | 564 | WP_000282077.1 | inovirus-type Gp2 protein | - |
| P6O79_RS24665 (5049993) | 5049993..5050328 | + | 336 | Protein_4818 | DEAD/DEAH box helicase | - |
| P6O79_RS24670 (5050516) | 5050516..5055474 | + | 4959 | WP_061088962.1 | AAA domain-containing protein | - |
| P6O79_RS24675 (5055471) | 5055471..5056907 | + | 1437 | WP_000622487.1 | hypothetical protein | - |
| P6O79_RS24680 (5057009) | 5057009..5057320 | + | 312 | Protein_4821 | IS66 family transposase ISEc47 | Transposase |
| P6O79_RS24685 (5057387) | 5057387..5058277 | - | 891 | Protein_4822 | hypothetical protein | VF |
| P6O79_RS24690 (5058370) | 5058370..5059869 | + | 1500 | WP_000174402.1 | IS21 family transposase ISEc10 | Transposase |
| P6O79_RS24695 (5059866) | 5059866..5060621 | + | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| P6O79_RS24700 (5060765) | 5060765..5061583 | + | 819 | WP_001620924.1 | DUF932 domain-containing protein | - |
| P6O79_RS24705 (5061583) | 5061583..5061828 | + | 246 | WP_001620925.1 | hypothetical protein | - |
| P6O79_RS24710 (5061922) | 5061922..5062401 | + | 480 | WP_021543703.1 | antirestriction protein | - |
| P6O79_RS24715 (5062417) | 5062417..5062893 | + | 477 | WP_021543704.1 | RadC family protein | - |
| P6O79_RS24720 (5062956) | 5062956..5063177 | + | 222 | WP_000692300.1 | DUF987 domain-containing protein | - |
| P6O79_RS24725 (5063196) | 5063196..5063840 | + | 645 | WP_021543705.1 | hypothetical protein | - |
| P6O79_RS24730 (5063890) | 5063890..5064255 | + | 366 | WP_021543706.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| P6O79_RS24735 (5064302) | 5064302..5064679 | + | 378 | WP_000854738.1 | TA system toxin CbtA family protein | Toxin Detail |
| P6O79_RS24740 (5064676) | 5064676..5065179 | + | 504 | WP_021531035.1 | DUF5983 family protein | - |
| P6O79_RS24745 (5065176) | 5065176..5065373 | + | 198 | WP_000839287.1 | DUF957 domain-containing protein | - |
| P6O79_RS24750 (5065470) | 5065470..5066313 | + | 844 | Protein_4835 | DUF4942 domain-containing protein | - |
| P6O79_RS24760 (5066916) | 5066916..5067509 | - | 594 | WP_001576618.1 | hypothetical protein | - |
| P6O79_RS24765 (5067511) | 5067511..5068125 | - | 615 | WP_001576620.1 | hypothetical protein | - |
| P6O79_RS24770 (5068127) | 5068127..5068654 | - | 528 | WP_001576621.1 | Mor transcription activator family protein | - |
| P6O79_RS24775 (5068895) | 5068895..5069173 | - | 279 | WP_001576623.1 | hypothetical protein | - |
| P6O79_RS24780 (5069170) | 5069170..5069649 | - | 480 | WP_001576624.1 | hypothetical protein | - |
| P6O79_RS24785 (5069787) | 5069787..5069978 | + | 192 | WP_001576626.1 | toxin-antitoxin system HicB family antitoxin | - |
| P6O79_RS24790 (5070824) | 5070824..5071075 | + | 252 | WP_001576628.1 | hypothetical protein | - |
| P6O79_RS24795 (5071117) | 5071117..5072085 | - | 969 | WP_073970534.1 | IS5 family transposase IS903 | Transposase |
| P6O79_RS24800 (5072725) | 5072725..5072869 | + | 145 | Protein_4844 | transposase zinc-binding domain-containing protein | - |
| P6O79_RS24805 (5073184) | 5073184..5073402 | - | 219 | WP_001040187.1 | translation initiation factor IF-1 | - |
| P6O79_RS24810 (5073687) | 5073687..5074391 | - | 705 | WP_001241674.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| P6O79_RS24815 (5074433) | 5074433..5076154 | - | 1722 | WP_001202204.1 | cysteine/glutathione ABC transporter ATP-binding protein/permease CydC | - |
| P6O79_RS24820 (5076155) | 5076155..5077921 | - | 1767 | WP_277715592.1 | cysteine/glutathione ABC transporter permease/ATP-binding protein CydD | - |
| P6O79_RS24825 (5078044) | 5078044..5079009 | - | 966 | WP_001385255.1 | thioredoxin-disulfide reductase | - |
| P6O79_RS24830 (5079553) | 5079553..5080047 | + | 495 | WP_000228473.1 | leucine-responsive transcriptional regulator Lrp | - |
| P6O79_RS24835 (5080182) | 5080182..5084288 | + | 4107 | WP_001576631.1 | DNA translocase FtsK | - |
| P6O79_RS24840 (5084447) | 5084447..5085058 | + | 612 | WP_001295343.1 | outer membrane lipoprotein chaperone LolA | - |
| P6O79_RS24845 (5085069) | 5085069..5086412 | + | 1344 | WP_000067797.1 | replication-associated recombination protein RarA | - |
| P6O79_RS24850 (5086503) | 5086503..5087795 | + | 1293 | WP_000886683.1 | serine--tRNA ligase | - |
| P6O79_RS24855 (5088034) | 5088034..5090478 | + | 2445 | WP_000850306.1 | dimethylsulfoxide reductase subunit A | - |
| P6O79_RS24860 (5090489) | 5090489..5091106 | + | 618 | WP_000213098.1 | dimethylsulfoxide reductase subunit B | - |
| P6O79_RS24865 (5091108) | 5091108..5091971 | + | 864 | WP_000534666.1 | dimethyl sulfoxide reductase anchor subunit DmsC | - |
| P6O79_RS24870 (5092007) | 5092007..5092633 | - | 627 | WP_000165876.1 | isochorismate family cysteine hydrolase YcaC | - |
| P6O79_RS24875 (5092947) | 5092947..5094095 | + | 1149 | WP_000109283.1 | MFS transporter | - |
| P6O79_RS24880 (5094192) | 5094192..5094989 | - | 798 | WP_000067979.1 | pyruvate formate lyase 1-activating protein | - |
| P6O79_RS24885 (5095021) | 5095021..5096016 | - | 996 | WP_000023390.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| P6O79_RS24890 (5096110) | 5096110..5096421 | - | 312 | WP_000072552.1 | helix-turn-helix transcriptional regulator | - |
| P6O79_RS24895 (5096526) | 5096526..5096882 | + | 357 | WP_001576635.1 | Cox family DNA-binding protein | - |
| P6O79_RS24900 (5096893) | 5096893..5097063 | + | 171 | WP_164907187.1 | hypothetical protein | - |
| P6O79_RS24905 (5097060) | 5097060..5097560 | + | 501 | WP_000217677.1 | hypothetical protein | - |
| P6O79_RS24910 (5097624) | 5097624..5097848 | + | 225 | WP_001576637.1 | DUF2732 family protein | - |
| P6O79_RS24915 (5097848) | 5097848..5098150 | + | 303 | WP_001576638.1 | DUF5405 family protein | - |
| P6O79_RS24920 (5098150) | 5098150..5098374 | + | 225 | WP_001576640.1 | hypothetical protein ; Integrase | Integrase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|