MGE detailed information
MGE type: Genomic_island MGE length: 48156 bp
Accession: NZ_CP120633 Location: 4410859..4459014 Organism: Escherichia coli strain USVAST219 Replicon: chromosome
Accession: NZ_CP120633 Location: 4410859..4459014 Organism: Escherichia coli strain USVAST219 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P6O79_RS21570 (4407124) | 4407124..4408227 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| P6O79_RS21575 (4408239) | 4408239..4409492 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| P6O79_RS21585 (4409697) | 4409697..4409900 | - | 204 | Protein_4218 | integrase | - |
| P6O79_RS21590 (4410046) | 4410046..4410516 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| P6O79_RS21595 (4410494) | 4410494..4410652 | - | 159 | WP_071550417.1 | ash family protein | - |
| P6O79_RS21600 (4410859) | 4410859..4412106 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| P6O79_RS21605 (4412096) | 4412096..4413733 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| P6O79_RS21610 (4413727) | 4413727..4416825 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| P6O79_RS21615 (4417109) | 4417109..4417891 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| P6O79_RS21620 (4417878) | 4417878..4418798 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| P6O79_RS21625 (4418963) | 4418963..4419739 | - | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| P6O79_RS21630 (4419947) | 4419947..4420282 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| P6O79_RS21635 (4420509) | 4420509..4420667 | - | 159 | Protein_4228 | integrase | - |
| P6O79_RS21640 (4420716) | 4420716..4420901 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| P6O79_RS21645 (4421116) | 4421116..4421730 | + | 615 | WP_001019923.1 | YagU family protein | - |
| P6O79_RS21650 (4421801) | 4421801..4421967 | + | 167 | Protein_4231 | tail fiber assembly protein | - |
| P6O79_RS21655 (4421979) | 4421979..4422308 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| P6O79_RS21660 (4422615) | 4422615..4423325 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| P6O79_RS21665 (4423294) | 4423294..4424937 | - | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| P6O79_RS21670 (4424927) | 4424927..4427452 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| P6O79_RS21675 (4427478) | 4427478..4428146 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| P6O79_RS21680 (4428203) | 4428203..4428790 | - | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| P6O79_RS21685 (4428865) | 4428865..4429407 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| P6O79_RS21690 (4430231) | 4430231..4430456 | + | 226 | Protein_4239 | protein YkgL | - |
| P6O79_RS21695 (4430491) | 4430491..4430631 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| P6O79_RS21700 (4430631) | 4430631..4430894 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| P6O79_RS21705 (4431230) | 4431230..4431313 | - | 84 | Protein_4242 | hypothetical protein | - |
| P6O79_RS21710 (4431833) | 4431833..4432975 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| P6O79_RS21715 (4433148) | 4433148..4434068 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| P6O79_RS21720 (4434225) | 4434225..4435151 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| P6O79_RS21725 (4435351) | 4435351..4436244 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| P6O79_RS21730 (4436275) | 4436275..4437264 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| P6O79_RS21735 (4437291) | 4437291..4438142 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| P6O79_RS21740 (4438708) | 4438708..4442955 | + | 4248 | WP_000092553.1 | hypothetical protein | VF |
| P6O79_RS21745 (4443080) | 4443080..4443937 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| P6O79_RS21750 (4444185) | 4444185..4445054 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| P6O79_RS21755 (4445214) | 4445214..4445807 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| P6O79_RS21760 (4445819) | 4445819..4446055 | - | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| P6O79_RS21765 (4446164) | 4446164..4447489 | - | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| P6O79_RS21770 (4447716) | 4447716..4448570 | + | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| P6O79_RS21775 (4449096) | 4449096..4449815 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| P6O79_RS21780 (4449826) | 4449826..4451253 | + | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| P6O79_RS21785 (4451246) | 4451246..4451941 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| P6O79_RS21790 (4452184) | 4452184..4452852 | - | 669 | WP_001005267.1 | protein YkgH | - |
| P6O79_RS21795 (4453036) | 4453036..4455327 | - | 2292 | WP_000798065.1 | outer membrane autotransporter HyxB | - |
| P6O79_RS21800 (4455369) | 4455369..4456130 | - | 762 | WP_001213045.1 | protein HyxA | - |
| P6O79_RS21805 (4456284) | 4456284..4457078 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| P6O79_RS21810 (4457408) | 4457408..4457971 | - | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| P6O79_RS21815 (4459056) | 4459056..4460726 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| P6O79_RS21820 (4460740) | 4460740..4462212 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| P6O79_RS21825 (4462226) | 4462226..4462813 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|