MGE detailed information
MGE type: Genomic_island MGE length: 24939 bp
Accession: NZ_CP120633 Location: 3780535..3805473 Organism: Escherichia coli strain USVAST219 Replicon: chromosome
Accession: NZ_CP120633 Location: 3780535..3805473 Organism: Escherichia coli strain USVAST219 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P6O79_RS18620 (3777383) | 3777383..3778102 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| P6O79_RS18625 (3778099) | 3778099..3779730 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| P6O79_RS18630 (3779911) | 3779911..3780141 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| P6O79_RS18635 (3780153) | 3780153..3780425 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| P6O79_RS18640 (3780535) | 3780535..3783072 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| P6O79_RS18645 (3783105) | 3783105..3783797 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| P6O79_RS18650 (3783862) | 3783862..3784386 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| P6O79_RS18655 (3784787) | 3784787..3788599 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| P6O79_RS18660 (3789497) | 3789497..3790327 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| P6O79_RS18665 (3791479) | 3791479..3795408 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| P6O79_RS18670 (3795622) | 3795622..3795894 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| P6O79_RS18675 (3796122) | 3796122..3796418 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| P6O79_RS18680 (3796446) | 3796446..3796619 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| P6O79_RS18685 (3796738) | 3796738..3798255 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| P6O79_RS18690 (3798492) | 3798492..3799949 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| P6O79_RS18695 (3800008) | 3800008..3802155 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| P6O79_RS18700 (3802235) | 3802235..3803569 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| P6O79_RS18705 (3803935) | 3803935..3805473 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| P6O79_RS18710 (3805733) | 3805733..3805892 | - | 160 | Protein_3659 | integrase | - |
| P6O79_RS18720 (3806272) | 3806272..3806847 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| P6O79_RS18725 (3806884) | 3806884..3808581 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| P6O79_RS18730 (3808557) | 3808557..3808895 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| P6O79_RS18735 (3809011) | 3809011..3810312 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|