MGE detailed information
MGE type: Prophage MGE length: 66726 bp
Accession: NZ_CP120568 Location: 2359533..2426258 Organism: Escherichia coli strain 582 Replicon: chromosome
Accession: NZ_CP120568 Location: 2359533..2426258 Organism: Escherichia coli strain 582 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5711_RS11430 (2355432) | 2355432..2356652 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| P5711_RS11435 (2356777) | 2356777..2357472 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| P5711_RS11440 (2357425) | 2357425..2358717 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| P5711_RS11445 (2358876) | 2358876..2359490 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| P5711_RS11450 (2359533) | 2359533..2360387 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| P5711_RS11455 (2360389) | 2360389..2361006 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| P5711_RS11460 (2361017) | 2361017..2363440 | - | 2424 | WP_072190333.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| P5711_RS11465 (2363501) | 2363501..2365927 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| P5711_RS11470 (2366126) | 2366126..2366431 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| P5711_RS11475 (2366539) | 2366539..2367249 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| P5711_RS11480 (2367252) | 2367252..2367812 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| P5711_RS11485 (2367847) | 2367847..2368188 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| P5711_RS11490 (2368323) | 2368323..2368649 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| P5711_RS11500 (2370169) | 2370169..2371383 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| P5711_RS11505 (2371395) | 2371395..2372414 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| P5711_RS11510 (2372602) | 2372602..2373882 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| P5711_RS11515 (2373917) | 2373917..2374168 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| P5711_RS11520 (2374241) | 2374241..2376712 | - | 2472 | WP_000048342.1 | exonuclease | - |
| P5711_RS11525 (2376805) | 2376805..2376996 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| P5711_RS11530 (2376993) | 2376993..2377181 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| P5711_RS11535 (2377749) | 2377749..2377967 | - | 219 | WP_001171942.1 | protein YdfC | - |
| P5711_RS11540 (2377997) | 2377997..2378125 | - | 129 | WP_000344964.1 | protein YdfB | - |
| P5711_RS11545 (2378127) | 2378127..2378282 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| P5711_RS11550 (2378449) | 2378449..2378856 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| P5711_RS11555 (2378940) | 2378940..2379170 | + | 231 | WP_277686164.1 | dicB transcriptional regulator DicC | - |
| P5711_RS11560 (2379154) | 2379154..2379675 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| P5711_RS11565 (2379656) | 2379656..2380621 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| P5711_RS11570 (2380662) | 2380662..2381084 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| P5711_RS11575 (2381081) | 2381081..2381570 | + | 490 | Protein_2260 | class I SAM-dependent methyltransferase | - |
| P5711_RS11580 (2382048) | 2382048..2382469 | + | 422 | Protein_2261 | hypothetical protein | - |
| P5711_RS11590 (2384440) | 2384440..2384829 | + | 390 | WP_016230970.1 | ISNCY family transposase ISRel10 | Transposase |
| P5711_RS11595 (2384854) | 2384854..2385480 | + | 627 | Protein_2264 | ISNCY family transposase ISCARN112 | Transposase |
| P5711_RS11600 (2385604) | 2385604..2385753 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| P5711_RS11605 (2386190) | 2386190..2386522 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| P5711_RS11610 (2386725) | 2386725..2387030 | - | 306 | WP_001326990.1 | protein YdfV | - |
| P5711_RS11615 (2387055) | 2387055..2387294 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| P5711_RS11620 (2387294) | 2387294..2387581 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| P5711_RS11625 (2387653) | 2387653..2387808 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| P5711_RS11630 (2388025) | 2388025..2388276 | + | 252 | WP_000980994.1 | protein Rem | - |
| P5711_RS11635 (2388343) | 2388343..2388621 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| P5711_RS11640 (2388623) | 2388623..2389021 | + | 399 | Protein_2273 | hypothetical protein | - |
| P5711_RS11645 (2389167) | 2389167..2389753 | + | 587 | Protein_2274 | IS3 family transposase ISSfl10 | Transposase |
| P5711_RS11650 (2389792) | 2389792..2391330 | - | 1539 | WP_001554465.1 | IS66 family transposase ISEc22 | Transposase |
| P5711_RS11655 (2391379) | 2391379..2391726 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| P5711_RS11660 (2391723) | 2391723..2392127 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| P5711_RS11665 (2392209) | 2392209..2392868 | + | 660 | Protein_2278 | DUF968 domain-containing protein | - |
| P5711_RS11670 (2392882) | 2392882..2393634 | + | 753 | WP_001047135.1 | antitermination protein | - |
| P5711_RS11675 (2393912) | 2393912..2394001 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| P5711_RS11680 (2394056) | 2394056..2394268 | - | 213 | WP_000087757.1 | cold shock-like protein CspF | - |
| P5711_RS11685 (2394569) | 2394569..2394784 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| P5711_RS11690 (2395148) | 2395148..2395318 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| P5711_RS11695 (2395538) | 2395538..2395753 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| P5711_RS11700 (2395758) | 2395758..2396069 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| P5711_RS11705 (2396066) | 2396066..2396599 | + | 534 | WP_001092971.1 | lysozyme | - |
| P5711_RS11710 (2396596) | 2396596..2397093 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| P5711_RS11715 (2397456) | 2397456..2397668 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| P5711_RS11720 (2397679) | 2397679..2397867 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| P5711_RS11725 (2397870) | 2397870..2397935 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| P5711_RS11730 (2397940) | 2397940..2398170 | + | 231 | WP_000720962.1 | protein YnfN | - |
| P5711_RS11735 (2398342) | 2398342..2398515 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| P5711_RS11740 (2398667) | 2398667..2399077 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| P5711_RS11745 (2399135) | 2399135..2399368 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| P5711_RS11750 (2399757) | 2399757..2400302 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| P5711_RS11755 (2400277) | 2400277..2402202 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| P5711_RS11760 (2402199) | 2402199..2402405 | + | 207 | WP_000198149.1 | gpW family protein | - |
| P5711_RS11765 (2402402) | 2402402..2404003 | + | 1602 | WP_016235295.1 | phage portal protein | - |
| P5711_RS11770 (2403984) | 2403984..2405303 | + | 1320 | WP_001702225.1 | S49 family peptidase | - |
| P5711_RS11775 (2405313) | 2405313..2405645 | + | 333 | WP_001299443.1 | head decoration protein | - |
| P5711_RS11780 (2405701) | 2405701..2406726 | + | 1026 | WP_033549155.1 | major capsid protein | - |
| P5711_RS11785 (2406768) | 2406768..2407163 | + | 396 | WP_000158895.1 | DNA-packaging protein FI | - |
| P5711_RS11790 (2407175) | 2407175..2407528 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| P5711_RS11795 (2407540) | 2407540..2408118 | + | 579 | WP_016248615.1 | phage tail protein | - |
| P5711_RS11800 (2408115) | 2408115..2408510 | + | 396 | WP_000683145.1 | phage minor tail U family protein | - |
| P5711_RS11805 (2408518) | 2408518..2409258 | + | 741 | WP_001530241.1 | phage tail protein | - |
| P5711_RS11810 (2409274) | 2409274..2409696 | + | 423 | WP_000479155.1 | phage minor tail protein G | - |
| P5711_RS11815 (2409678) | 2409678..2410112 | + | 435 | WP_137533671.1 | phage tail assembly protein T | - |
| P5711_RS11820 (2410105) | 2410105..2412666 | + | 2562 | WP_277686086.1 | phage tail tape measure protein | - |
| P5711_RS11825 (2412663) | 2412663..2412992 | + | 330 | WP_046952090.1 | phage tail protein | - |
| P5711_RS11830 (2412992) | 2412992..2413690 | + | 699 | WP_001152644.1 | phage minor tail protein L | - |
| P5711_RS11835 (2413696) | 2413696..2414439 | + | 744 | WP_277686085.1 | C40 family peptidase | - |
| P5711_RS11840 (2414436) | 2414436..2415008 | + | 573 | WP_033817502.1 | tail assembly protein | - |
| P5711_RS11845 (2415069) | 2415069..2418566 | + | 3498 | WP_277686165.1 | host specificity protein J | - |
| P5711_RS11850 (2418637) | 2418637..2419236 | + | 600 | WP_001233090.1 | Outer membrane protein X | VF |
| P5711_RS11855 (2419301) | 2419301..2422375 | + | 3075 | WP_016230955.1 | phage tail protein | - |
| P5711_RS11860 (2422375) | 2422375..2422950 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| P5711_RS11865 (2423048) | 2423048..2423638 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| P5711_RS11870 (2423955) | 2423955..2424188 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| P5711_RS11875 (2424257) | 2424257..2424370 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| P5711_RS11880 (2424891) | 2424891..2426258 | + | 1368 | Protein_2321 | MHS family MFS transporter | - |
| P5711_RS11885 (2426347) | 2426347..2427807 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| P5711_RS11890 (2427842) | 2427842..2428045 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| P5711_RS11895 (2428222) | 2428222..2428908 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| P5711_RS11900 (2428997) | 2428997..2429743 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|