MGE detailed information
MGE type: Prophage MGE length: 56432 bp
Accession: NZ_CP120549 Location: 3841270..3897701 Organism: Escherichia coli strain B1172 Replicon: chromosome
Accession: NZ_CP120549 Location: 3841270..3897701 Organism: Escherichia coli strain B1172 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5710_RS18535 (3838055) | 3838055..3838549 | + | 495 | WP_001059463.1 | MarR family transcriptional regulator | - |
| P5710_RS18540 (3838987) | 3838987..3839322 | - | 336 | Protein_3634 | Arm DNA-binding domain-containing protein | - |
| P5710_RS18545 (3839836) | 3839836..3841170 | - | 1335 | WP_001560839.1 | PLP-dependent aminotransferase family protein | - |
| P5710_RS18550 (3841270) | 3841270..3842157 | + | 888 | WP_001560838.1 | DMT family transporter | - |
| P5710_RS18555 (3843083) | 3843083..3843523 | + | 441 | WP_001560837.1 | hypothetical protein | - |
| P5710_RS18560 (3843810) | 3843810..3844631 | + | 822 | WP_001560836.1 | DUF4145 domain-containing protein | - |
| P5710_RS18565 (3844792) | 3844792..3844907 | - | 116 | Protein_3639 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| P5710_RS18570 (3844937) | 3844937..3845092 | + | 156 | Protein_3640 | phage tail protein | - |
| P5710_RS18575 (3845325) | 3845325..3845768 | + | 444 | WP_001560834.1 | tail fiber assembly protein | - |
| P5710_RS18580 (3845740) | 3845740..3846342 | - | 603 | WP_001560833.1 | tail fiber assembly protein | - |
| P5710_RS18585 (3846342) | 3846342..3847112 | - | 771 | WP_001560832.1 | tail fiber protein | - |
| P5710_RS18590 (3847116) | 3847116..3847700 | - | 585 | WP_001560831.1 | YmfQ family protein | - |
| P5710_RS18595 (3847691) | 3847691..3848749 | - | 1059 | WP_001560830.1 | baseplate J/gp47 family protein | - |
| P5710_RS18600 (3848736) | 3848736..3849161 | - | 426 | WP_000424728.1 | phage GP46 family protein | - |
| P5710_RS18605 (3849161) | 3849161..3849709 | - | 549 | WP_000643722.1 | phage baseplate assembly protein V | - |
| P5710_RS18610 (3849709) | 3849709..3850788 | - | 1080 | WP_001560828.1 | phage tail protein | - |
| P5710_RS18615 (3850785) | 3850785..3852113 | - | 1329 | WP_000219913.1 | DNA circularization N-terminal domain-containing protein | - |
| P5710_RS18620 (3852175) | 3852175..3852705 | - | 531 | WP_001560827.1 | hypothetical protein | - |
| P5710_RS18625 (3852797) | 3852797..3854629 | - | 1833 | WP_001560825.1 | phage tail tape measure protein | - |
| P5710_RS18630 (3854771) | 3854771..3855040 | - | 270 | WP_000661047.1 | phage tail assembly protein | - |
| P5710_RS18635 (3855040) | 3855040..3855396 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| P5710_RS18640 (3855396) | 3855396..3856892 | - | 1497 | WP_001566173.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| P5710_RS18645 (3856876) | 3856876..3857046 | - | 171 | WP_001560821.1 | DUF2635 domain-containing protein | - |
| P5710_RS18650 (3857055) | 3857055..3857615 | - | 561 | WP_001560820.1 | hypothetical protein | - |
| P5710_RS18655 (3857612) | 3857612..3858118 | - | 507 | WP_001560819.1 | hypothetical protein | - |
| P5710_RS18660 (3858093) | 3858093..3858503 | - | 411 | WP_001560818.1 | phage head closure protein | - |
| P5710_RS18665 (3858500) | 3858500..3858823 | - | 324 | WP_000927711.1 | head-tail connector protein | - |
| P5710_RS18670 (3858826) | 3858826..3859026 | - | 201 | WP_000601360.1 | hypothetical protein | - |
| P5710_RS18675 (3859076) | 3859076..3860281 | - | 1206 | WP_001560817.1 | phage major capsid protein | - |
| P5710_RS18680 (3860296) | 3860296..3860946 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| P5710_RS18685 (3860924) | 3860924..3862165 | - | 1242 | WP_001560816.1 | phage portal protein | - |
| P5710_RS18690 (3862165) | 3862165..3862347 | - | 183 | WP_000605605.1 | protein YmfR | - |
| P5710_RS18695 (3862359) | 3862359..3864092 | - | 1734 | WP_000088150.1 | terminase large subunit | - |
| P5710_RS18700 (3864089) | 3864089..3864583 | - | 495 | WP_001560815.1 | phage terminase small subunit P27 family | - |
| P5710_RS18705 (3864709) | 3864709..3865059 | - | 351 | WP_001560814.1 | HNH endonuclease signature motif containing protein | - |
| P5710_RS18710 (3865478) | 3865478..3866071 | - | 594 | WP_001560812.1 | hypothetical protein | - |
| P5710_RS18715 (3866266) | 3866266..3866523 | - | 258 | WP_122988557.1 | Rz1 lytic protein | - |
| P5710_RS18720 (3866408) | 3866408..3866800 | - | 393 | WP_019842918.1 | DUF2570 domain-containing protein | - |
| P5710_RS18725 (3866784) | 3866784..3867260 | - | 477 | WP_001560810.1 | glycoside hydrolase family protein | - |
| P5710_RS18730 (3867264) | 3867264..3867590 | - | 327 | WP_001560809.1 | phage holin, lambda family | - |
| P5710_RS18735 (3867872) | 3867872..3868963 | + | 1092 | WP_001560808.1 | hypothetical protein | - |
| P5710_RS18740 (3868960) | 3868960..3869277 | + | 318 | WP_001560807.1 | STAS-like domain-containing protein | - |
| P5710_RS18745 (3869277) | 3869277..3869738 | + | 462 | WP_001560806.1 | hypothetical protein | - |
| P5710_RS18750 (3869773) | 3869773..3870117 | - | 345 | WP_001560805.1 | antiterminator Q family protein | - |
| P5710_RS18755 (3870135) | 3870135..3871124 | - | 990 | WP_001560804.1 | DUF968 domain-containing protein | - |
| P5710_RS18760 (3871132) | 3871132..3871929 | - | 798 | WP_001061397.1 | KilA-N domain-containing protein | - |
| P5710_RS18765 (3871949) | 3871949..3872338 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| P5710_RS18770 (3872335) | 3872335..3872661 | - | 327 | WP_001560803.1 | LexA repressor | - |
| P5710_RS18775 (3872661) | 3872661..3873149 | - | 489 | WP_019842920.1 | PerC family transcriptional regulator | - |
| P5710_RS18780 (3873146) | 3873146..3874087 | - | 942 | WP_001560801.1 | helix-turn-helix domain-containing protein | - |
| P5710_RS18785 (3874077) | 3874077..3874256 | - | 180 | WP_071589348.1 | DUF4222 domain-containing protein | - |
| P5710_RS18790 (3874432) | 3874432..3874983 | - | 552 | WP_001560799.1 | protein YmfL | - |
| P5710_RS18795 (3875027) | 3875027..3875227 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| P5710_RS18800 (3875318) | 3875318..3875992 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| P5710_RS18805 (3876186) | 3876186..3876461 | + | 276 | WP_021563905.1 | hypothetical protein | - |
| P5710_RS18810 (3876737) | 3876737..3877047 | + | 311 | Protein_3688 | hypothetical protein | - |
| P5710_RS18815 (3877062) | 3877062..3877424 | + | 363 | WP_000135682.1 | protein YfdP | - |
| P5710_RS18820 (3877490) | 3877490..3878314 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| P5710_RS18825 (3878442) | 3878442..3878978 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| P5710_RS18830 (3878969) | 3878969..3879331 | + | 363 | WP_001242749.1 | phage protein | - |
| P5710_RS18835 (3879331) | 3879331..3879636 | + | 306 | WP_000206732.1 | protein YfdT | - |
| P5710_RS18840 (3879636) | 3879636..3879986 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| P5710_RS18845 (3879908) | 3879908..3881026 | + | 1119 | WP_225385170.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| P5710_RS18855 (3881231) | 3881231..3882484 | - | 1254 | WP_000893298.1 | glutamate-5-semialdehyde dehydrogenase | - |
| P5710_RS18860 (3882496) | 3882496..3883599 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| P5710_RS18865 (3883888) | 3883888..3884943 | + | 1056 | WP_000749898.1 | phosphoporin PhoE | - |
| P5710_RS18870 (3884982) | 3884982..3885383 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (3886101) | 3886101..3886181 | - | 81 | NuclAT_4 | - | - |
| - (3886101) | 3886101..3886181 | - | 81 | NuclAT_4 | - | - |
| - (3886101) | 3886101..3886181 | - | 81 | NuclAT_4 | - | - |
| - (3886101) | 3886101..3886181 | - | 81 | NuclAT_4 | - | - |
| P5710_RS18875 (3885441) | 3885441..3886685 | - | 1245 | WP_000189573.1 | esterase FrsA | - |
| P5710_RS18880 (3886777) | 3886777..3887235 | - | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| P5710_RS18885 (3887496) | 3887496..3888953 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| P5710_RS18890 (3889010) | 3889010..3889624 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| P5710_RS18895 (3889621) | 3889621..3890760 | - | 1140 | WP_000521578.1 | RNA ligase RtcB family protein | - |
| P5710_RS18900 (3890950) | 3890950..3891402 | - | 453 | WP_001059897.1 | GNAT family N-acetyltransferase | - |
| P5710_RS18905 (3891412) | 3891412..3891810 | - | 399 | WP_001518358.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| P5710_RS18910 (3891813) | 3891813..3892106 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| P5710_RS18915 (3892158) | 3892158..3893213 | - | 1056 | WP_001226170.1 | DNA polymerase IV | - |
| P5710_RS18920 (3893284) | 3893284..3894069 | - | 786 | WP_000207543.1 | hypothetical protein | VF |
| P5710_RS18925 (3894041) | 3894041..3895753 | + | 1713 | Protein_3710 | Flagellar biosynthesis protein FlhA | VF |
| P5710_RS18930 (3895781) | 3895781..3896275 | + | 495 | WP_139174989.1 | hypothetical protein | - |
| P5710_RS18935 (3896270) | 3896270..3896767 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| P5710_RS18940 (3896943) | 3896943..3897692 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| P5710_RS18945 (3898004) | 3898004..3898744 | + | 741 | WP_001518356.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| P5710_RS18950 (3898715) | 3898715..3899482 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| P5710_RS18955 (3899687) | 3899687..3900265 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|