MGE detailed information
MGE type: Genomic_island MGE length: 16142 bp
Accession: NZ_CP120399 Location: 815154..831295 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 314-2017_CO_03 Replicon: chromosome
Accession: NZ_CP120399 Location: 815154..831295 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 314-2017_CO_03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PVA79_RS03940 (PVA79_03940) | 810294..811392 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PVA79_RS03945 (PVA79_03945) | 811402..812919 | + | 1518 | WP_000003338.1 | lysine--tRNA ligase | - |
| PVA79_RS03950 (PVA79_03950) | 812995..813540 | - | 546 | WP_000133998.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PVA79_RS03955 (PVA79_03955) | 813805..814563 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PVA79_RS03965 (PVA79_03965) | 814851..816470 | + | 1620 | WP_014341476.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PVA79_RS03970 (PVA79_03970) | 817396..818115 | + | 720 | WP_000082599.1 | Rha family transcriptional regulator | - |
| PVA79_RS03975 (PVA79_03975) | 818119..818322 | + | 204 | WP_000184036.1 | hypothetical protein | - |
| PVA79_RS03980 (PVA79_03980) | 818405..818860 | + | 456 | WP_223229661.1 | hypothetical protein | - |
| PVA79_RS03985 (PVA79_03985) | 818962..820083 | + | 1122 | WP_000028980.1 | hypothetical protein | - |
| PVA79_RS03990 (PVA79_03990) | 820716..821522 | - | 807 | WP_077905073.1 | DUF1460 domain-containing protein | - |
| PVA79_RS03995 (PVA79_03995) | 821797..822048 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| PVA79_RS04000 (PVA79_04000) | 822225..822452 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PVA79_RS04005 (PVA79_04005) | 822452..822850 | + | 399 | WP_000911334.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PVA79_RS04010 (PVA79_04010) | 823657..824193 | + | 537 | WP_001038500.1 | Attachment invasion locus protein | VF |
| PVA79_RS04015 (PVA79_04015) | 824240..824872 | + | 633 | WP_000835268.1 | YfdX family protein | - |
| PVA79_RS04020 (PVA79_04020) | 825591..826172 | + | 582 | WP_001244646.1 | putative fimbrial-like protein YbgD | VF |
| PVA79_RS04025 (PVA79_04025) | 826292..828781 | + | 2490 | WP_000705516.1 | Outer membrane usher protein PapC | VF |
| PVA79_RS04030 (PVA79_04030) | 828822..829565 | + | 744 | WP_000798497.1 | Chaperone protein PapD | VF |
| PVA79_RS04035 (PVA79_04035) | 829562..830638 | + | 1077 | WP_000141334.1 | hypothetical protein | - |
| PVA79_RS04040 (PVA79_04040) | 830783..831295 | + | 513 | WP_000336256.1 | CaiF/GrlA family transcriptional regulator | - |
| PVA79_RS04045 (PVA79_04045) | 831282..832040 | + | 759 | WP_000134788.1 | transcriptional regulator | - |
| PVA79_RS04050 (PVA79_04050) | 832250..833104 | - | 855 | Protein_793 | nickel/cobalt efflux protein RcnA | - |
| PVA79_RS04055 (PVA79_04055) | 833226..833498 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PVA79_RS04060 (PVA79_04060) | 833529..834758 | - | 1230 | WP_000036836.1 | amino acid permease | - |
| PVA79_RS04065 (PVA79_04065) | 834900..835355 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|