MGE detailed information
MGE type: Genomic_island MGE length: 30562 bp
Accession: NZ_CP120398 Location: 816200..846761 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 424-2019_CI Replicon: chromosome
Accession: NZ_CP120398 Location: 816200..846761 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 424-2019_CI Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PVA85_RS03945 (PVA85_03945) | 811378..812895 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PVA85_RS03950 (PVA85_03950) | 812971..813516 | - | 546 | WP_000133998.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PVA85_RS03955 (PVA85_03955) | 813781..814539 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PVA85_RS03965 (PVA85_03965) | 814857..816071 | + | 1215 | WP_001603436.1 | tyrosine-type recombinase/integrase | - |
| PVA85_RS03970 (PVA85_03970) | 816200..816955 | + | 756 | WP_016262924.1 | hypothetical protein | - |
| PVA85_RS03975 (PVA85_03975) | 817070..817267 | + | 198 | WP_004027535.1 | AlpA family transcriptional regulator | - |
| PVA85_RS03980 (PVA85_03980) | 817345..818145 | + | 801 | WP_001515791.1 | antA/AntB antirepressor family protein | - |
| PVA85_RS03985 (PVA85_03985) | 818770..819075 | - | 306 | WP_031625007.1 | YlcI/YnfO family protein | - |
| PVA85_RS03990 (PVA85_03990) | 819410..819631 | + | 222 | WP_247178935.1 | host cell division inhibitor Icd-like protein | - |
| PVA85_RS03995 (PVA85_03995) | 819624..819989 | + | 366 | WP_031625005.1 | hypothetical protein | - |
| PVA85_RS04000 (PVA85_04000) | 819982..820182 | + | 201 | WP_001421990.1 | hypothetical protein | - |
| PVA85_RS04005 (PVA85_04005) | 820187..820477 | + | 291 | WP_004027526.1 | DUF4222 domain-containing protein | - |
| PVA85_RS04010 (PVA85_04010) | 820474..821886 | + | 1413 | WP_031625003.1 | helicase RepA family protein | - |
| PVA85_RS04015 (PVA85_04015) | 822298..823071 | + | 774 | WP_031625002.1 | hypothetical protein | - |
| PVA85_RS04020 (PVA85_04020) | 823095..823625 | + | 531 | WP_004027524.1 | ProQ/FinO family protein | - |
| PVA85_RS04025 (PVA85_04025) | 823622..823909 | + | 288 | WP_031625001.1 | PerC family transcriptional regulator | - |
| PVA85_RS04030 (PVA85_04030) | 824111..824284 | + | 174 | WP_001224090.1 | hypothetical protein | - |
| PVA85_RS04035 (PVA85_04035) | 824324..824908 | + | 585 | WP_031625000.1 | hypothetical protein | - |
| PVA85_RS04040 (PVA85_04040) | 824973..825644 | + | 672 | WP_004027511.1 | DUF2213 domain-containing protein | - |
| PVA85_RS04045 (PVA85_04045) | 825651..826178 | + | 528 | WP_031624998.1 | hypothetical protein | - |
| PVA85_RS04050 (PVA85_04050) | 826483..826662 | + | 180 | WP_031624997.1 | hypothetical protein | - |
| PVA85_RS04055 (PVA85_04055) | 826994..827887 | + | 894 | WP_001601654.1 | DUF4747 family protein | - |
| PVA85_RS04060 (PVA85_04060) | 827887..828486 | + | 600 | WP_016262943.1 | hypothetical protein | - |
| PVA85_RS04065 (PVA85_04065) | 828847..830466 | + | 1620 | WP_014341476.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PVA85_RS04070 (PVA85_04070) | 831402..832121 | + | 720 | WP_000082599.1 | Rha family transcriptional regulator | - |
| PVA85_RS04075 (PVA85_04075) | 832125..832328 | + | 204 | WP_000184036.1 | hypothetical protein | - |
| PVA85_RS04080 (PVA85_04080) | 832411..832866 | + | 456 | WP_223229661.1 | hypothetical protein | - |
| PVA85_RS04085 (PVA85_04085) | 832968..834089 | + | 1122 | WP_000028980.1 | hypothetical protein | - |
| PVA85_RS04090 (PVA85_04090) | 834722..835528 | - | 807 | WP_077905073.1 | DUF1460 domain-containing protein | - |
| PVA85_RS04095 (PVA85_04095) | 835803..836054 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| PVA85_RS04100 (PVA85_04100) | 836231..836458 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PVA85_RS04105 (PVA85_04105) | 836458..836856 | + | 399 | WP_000911334.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PVA85_RS04110 (PVA85_04110) | 837663..838199 | + | 537 | WP_001038500.1 | Attachment invasion locus protein | VF |
| PVA85_RS04115 (PVA85_04115) | 838246..838878 | + | 633 | WP_000835268.1 | YfdX family protein | - |
| PVA85_RS04120 (PVA85_04120) | 839597..840178 | + | 582 | WP_001244646.1 | putative fimbrial-like protein YbgD | VF |
| PVA85_RS04125 (PVA85_04125) | 840298..842787 | + | 2490 | WP_000705516.1 | Outer membrane usher protein PapC | VF |
| PVA85_RS04130 (PVA85_04130) | 842828..843571 | + | 744 | WP_000798497.1 | Chaperone protein PapD | VF |
| PVA85_RS04135 (PVA85_04135) | 843568..844644 | + | 1077 | WP_000141334.1 | hypothetical protein | - |
| PVA85_RS04140 (PVA85_04140) | 844789..845301 | + | 513 | WP_000336256.1 | CaiF/GrlA family transcriptional regulator | - |
| PVA85_RS04145 (PVA85_04145) | 845288..846046 | + | 759 | WP_000134788.1 | transcriptional regulator | - |
| PVA85_RS04150 (PVA85_04150) | 846256..847146 | - | 891 | Protein_813 | nickel/cobalt efflux protein RcnA | - |
| PVA85_RS04155 (PVA85_04155) | 847268..847540 | + | 273 | WP_031624994.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PVA85_RS04160 (PVA85_04160) | 847571..848800 | - | 1230 | WP_000036836.1 | amino acid permease | - |
| PVA85_RS04165 (PVA85_04165) | 848942..849397 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| PVA85_RS04170 (PVA85_04170) | 849501..850364 | + | 864 | WP_001270764.1 | LysR family transcriptional regulator | - |
| PVA85_RS04175 (PVA85_04175) | 850487..851665 | + | 1179 | WP_000665983.1 | acetyl-CoA C-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|