NZ_CP1203984111207..4244123

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 132917 bp
Accession: NZ_CP120398        Location: 4111207..4244123         Organism: Salmonella enterica subsp. enterica serovar Typhi strain 424-2019_CI       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PVA85_RS20260 (PVA85_20255) 4107006..4108307 + 1302 WP_000637594.1 anaerobic C4-dicarboxylate transporter DcuA -
PVA85_RS20265 (PVA85_20260) 4108428..4108775 + 348 WP_000887832.1 divalent cation tolerance protein CutA -
PVA85_RS20270 (PVA85_20265) 4108751..4110454 + 1704 WP_000068881.1 protein-disulfide reductase DsbD -
PVA85_RS20275 (PVA85_20270) 4110491..4111066 + 576 WP_001188506.1 transcriptional regulator -
PVA85_RS20285 (PVA85_20280) 4111417..4112676 + 1260 WP_000954536.1 Prophage integrase IntS ; Integrase Integrase
PVA85_RS20290 (PVA85_20285) 4112987..4114270 + 1284 WP_000975154.1 SH3 domain-containing protein -
PVA85_RS20295 (PVA85_20290) 4114355..4114624 + 270 Protein_3976 integrase -
PVA85_RS20300 (PVA85_20295) 4115251..4116033 - 783 WP_000511749.1 hypothetical protein ; Integrase Integrase
PVA85_RS20305 (PVA85_20300) 4116303..4116497 + 195 WP_162009227.1 hypothetical protein -
PVA85_RS20310 (PVA85_20305) 4116890..4117111 - 222 WP_000193665.1 helix-turn-helix transcriptional regulator -
PVA85_RS20315 (PVA85_20310) 4117108..4117569 - 462 WP_000246267.1 hypothetical protein -
PVA85_RS20320 (PVA85_20315) 4118116..4119789 + 1674 WP_010989301.1 hypothetical protein -
PVA85_RS20325 (PVA85_20320) 4119870..4122155 + 2286 WP_010989300.1 hypothetical protein -
PVA85_RS20330 (PVA85_20325) 4122459..4122710 + 252 WP_024131240.1 hypothetical protein -
PVA85_RS20335 (PVA85_20330) 4122792..4123244 + 453 WP_000434168.1 hypothetical protein -
PVA85_RS20340 (PVA85_20335) 4123424..4123912 - 489 WP_000622308.1 GNAT family N-acetyltransferase Toxin Detail
PVA85_RS20345 (PVA85_20340) 4123909..4124202 - 294 WP_001143724.1 DUF1778 domain-containing protein Antitoxin Detail
PVA85_RS20350 (PVA85_20345) 4124629..4125642 - 1014 WP_000449622.1 Tyrosine recombinase XerC ; Integrase Integrase
PVA85_RS20355 (PVA85_20350) 4125806..4127395 - 1590 WP_000488995.1 TraI domain-containing protein -
PVA85_RS20360 (PVA85_20355) 4127379..4128890 - 1512 WP_001120833.1 UvrD-helicase domain-containing protein -
PVA85_RS20365 (PVA85_20360) 4129744..4130283 + 540 WP_001210944.1 Vi polysaccharide biosynthesis regulator TviA -
PVA85_RS20370 (PVA85_20365) 4130528..4131805 + 1278 WP_000466893.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
PVA85_RS20375 (PVA85_20370) 4131808..4132854 + 1047 WP_000127915.1 UDP-N-acetylglucosamine 4-epimerase VF
PVA85_RS20380 (PVA85_20375) 4132878..4135373 + 2496 WP_010989299.1 hypothetical protein VF
PVA85_RS20385 (PVA85_20380) 4135373..4137109 + 1737 WP_000632616.1 hypothetical protein VF
PVA85_RS20390 (PVA85_20385) 4137154..4138221 + 1068 WP_000720235.1 hypothetical protein VF
PVA85_RS20395 (PVA85_20390) 4138231..4139025 + 795 WP_001023498.1 hypothetical protein VF
PVA85_RS20400 (PVA85_20395) 4139051..4139746 + 696 WP_000467404.1 Polysialic acid transport ATP-binding protein KpsT VF
PVA85_RS20405 (PVA85_20400) 4139769..4141073 + 1305 WP_000431675.1 hypothetical protein VF
PVA85_RS20410 (PVA85_20405) 4141093..4143063 + 1971 WP_000052242.1 hypothetical protein VF
PVA85_RS20415 (PVA85_20410) 4143365..4144111 - 747 WP_000354257.1 class I SAM-dependent methyltransferase -
PVA85_RS20420 (PVA85_20415) 4144111..4145001 - 891 WP_001681808.1 class I SAM-dependent methyltransferase -
PVA85_RS20425 (PVA85_20420) 4145012..4145269 - 258 WP_001681810.1 YjhX family toxin -
PVA85_RS20430 (PVA85_20425) 4145571..4145681 - 111 Protein_4003 autoinducer 2 ABC transporter substrate-binding protein -
PVA85_RS20435 (PVA85_20430) 4145916..4146260 + 345 Protein_4004 translesion error-prone DNA polymerase V autoproteolytic subunit -
PVA85_RS20440 (PVA85_20435) 4146376..4147401 - 1026 WP_000027757.1 Tyrosine recombinase XerC ; Integrase Integrase
PVA85_RS20445 (PVA85_20440) 4147405..4148037 - 633 WP_000052560.1 helix-turn-helix domain-containing protein -
PVA85_RS20450 (PVA85_20445) 4148154..4148396 + 243 WP_000102106.1 Rha family transcriptional regulator -
PVA85_RS20455 (PVA85_20450) 4148429..4148938 + 510 WP_000460852.1 phage regulatory CII family protein -
PVA85_RS20460 (PVA85_20455) 4148946..4149146 + 201 WP_000956167.1 DUF2724 domain-containing protein -
PVA85_RS20465 (PVA85_20460) 4149110..4149451 + 342 WP_000963479.1 DUF5347 family protein -
PVA85_RS20470 (PVA85_20465) 4149519..4149752 + 234 WP_001244240.1 DUF2732 family protein -
PVA85_RS20475 (PVA85_20470) 4149752..4149979 + 228 WP_000785510.1 TraR/DksA family transcriptional regulator -
PVA85_RS20480 (PVA85_20475) 4149976..4150560 + 585 WP_001090717.1 exonuclease domain-containing protein -
PVA85_RS20485 (PVA85_20480) 4150557..4151417 + 861 WP_000104130.1 DNA adenine methylase -
PVA85_RS20490 (PVA85_20485) 4151408..4153816 + 2409 WP_000301193.1 replication endonuclease -
PVA85_RS20495 (PVA85_20490) 4153984..4154172 + 189 WP_001154438.1 hypothetical protein -
PVA85_RS20500 (PVA85_20495) 4154184..4154417 + 234 WP_001217561.1 DinI family protein -
PVA85_RS20505 (PVA85_20500) 4154513..4154731 + 219 WP_000835188.1 hypothetical protein -
PVA85_RS20510 (PVA85_20505) 4154741..4155805 + 1065 WP_000829584.1 hypothetical protein -
PVA85_RS20515 (PVA85_20510) 4155802..4156866 + 1065 WP_000789323.1 hypothetical protein -
PVA85_RS20520 (PVA85_20515) 4156886..4157581 + 696 WP_000080839.1 hypothetical protein -
PVA85_RS20525 (PVA85_20520) 4157630..4158673 - 1044 WP_285238736.1 phage portal protein -
PVA85_RS20530 (PVA85_20525) 4158673..4160439 - 1767 WP_001098453.1 terminase ATPase subunit family protein -
PVA85_RS20535 (PVA85_20530) 4160582..4161415 + 834 WP_285238737.1 GPO family capsid scaffolding protein -
PVA85_RS20540 (PVA85_20535) 4161432..4162496 + 1065 WP_000730751.1 phage major capsid protein, P2 family -
PVA85_RS20545 (PVA85_20540) 4162500..4163150 + 651 WP_000059175.1 terminase endonuclease subunit -
PVA85_RS20550 (PVA85_20545) 4163244..4163708 + 465 WP_000673540.1 head completion/stabilization protein -
PVA85_RS20555 (PVA85_20550) 4163708..4163911 + 204 WP_000868184.1 tail protein X -
PVA85_RS20560 (PVA85_20555) 4163915..4164130 + 216 WP_000171566.1 HP1 family phage holin -
PVA85_RS20565 (PVA85_20560) 4164111..4164620 + 510 WP_001097942.1 lysozyme -
PVA85_RS20570 (PVA85_20565) 4164625..4165002 + 378 WP_000731034.1 DNZ54_00345 family protein -
PVA85_RS20575 (PVA85_20570) 4164999..4165427 + 429 WP_024131238.1 Rz-like lysis system protein LysB -
PVA85_RS20580 (PVA85_20575) 4165312..4165560 + 249 WP_223229656.1 Rz1-like lysis system protein LysC -
PVA85_RS20585 (PVA85_20580) 4165523..4165954 + 432 WP_001039961.1 phage tail protein -
PVA85_RS20590 (PVA85_20585) 4165947..4166393 + 447 WP_000343944.1 phage virion morphogenesis protein -
PVA85_RS20595 (PVA85_20590) 4166462..4167040 + 579 WP_000993749.1 phage baseplate assembly protein V -
PVA85_RS20600 (PVA85_20595) 4167037..4167396 + 360 WP_000177408.1 GPW/gp25 family protein -
PVA85_RS20605 (PVA85_20600) 4167383..4168291 + 909 WP_000268327.1 baseplate assembly protein -
PVA85_RS20610 (PVA85_20605) 4168284..4168889 + 606 WP_001086816.1 phage tail protein I -
PVA85_RS20615 (PVA85_20610) 4168886..4170505 + 1620 WP_000104806.1 phage tail protein -
PVA85_RS20620 (PVA85_20615) 4170512..4170919 + 408 WP_000006337.1 tail fiber assembly protein -
PVA85_RS20625 (PVA85_20620) 4171117..4171839 - 723 WP_000161708.1 Guanine nucleotide exchange factor SopE VF
PVA85_RS20630 (PVA85_20625) 4172050..4172271 + 222 Protein_4043 helix-turn-helix domain-containing protein -
PVA85_RS20635 (PVA85_20630) 4172374..4173546 + 1173 WP_000046101.1 phage tail sheath protein -
PVA85_RS20640 (PVA85_20635) 4173556..4174071 + 516 WP_001207653.1 phage major tail tube protein -
PVA85_RS20645 (PVA85_20640) 4174126..4174428 + 303 WP_001280965.1 phage tail assembly protein -
PVA85_RS20650 (PVA85_20645) 4174443..4174562 + 120 WP_000763315.1 GpE family phage tail protein -
PVA85_RS20655 (PVA85_20650) 4174555..4177335 + 2781 WP_001282813.1 phage tail tape measure protein -
PVA85_RS20660 (PVA85_20655) 4177335..4177820 + 486 WP_000980405.1 phage tail protein -
PVA85_RS20665 (PVA85_20660) 4177817..4178917 + 1101 WP_001011750.1 phage late control D family protein -
PVA85_RS20670 (PVA85_20665) 4178985..4179203 + 219 WP_001775272.1 ogr/Delta-like zinc finger family protein -
PVA85_RS20675 (PVA85_20670) 4179290..4179667 - 378 WP_001039750.1 hypothetical protein -
PVA85_RS20680 (PVA85_20675) 4179801..4179887 + 87 Protein_4053 peptidase -
PVA85_RS20685 (PVA85_20680) 4179887..4181161 + 1275 WP_000457555.1 Y-family DNA polymerase -
PVA85_RS20690 (PVA85_20685) 4181293..4181562 + 270 WP_001222413.1 hypothetical protein -
PVA85_RS20695 (PVA85_20690) 4181662..4181988 - 327 WP_000911568.1 DUF3085 domain-containing protein -
PVA85_RS20700 (PVA85_20695) 4182063..4182962 - 900 WP_000022217.1 hypothetical protein -
PVA85_RS20705 (PVA85_20700) 4183036..4183944 - 909 WP_000881183.1 hypothetical protein -
PVA85_RS20710 (PVA85_20705) 4184016..4185965 - 1950 WP_001097965.1 zincin-like metallopeptidase domain-containing protein -
PVA85_RS20715 (PVA85_20710) 4186054..4186512 - 459 WP_000115421.1 hypothetical protein -
PVA85_RS20720 (PVA85_20715) 4186590..4186886 - 297 WP_000968700.1 hypothetical protein -
PVA85_RS20725 (PVA85_20720) 4186883..4187335 - 453 WP_000979718.1 hypothetical protein -
PVA85_RS20730 (PVA85_20725) 4187353..4187562 - 210 WP_000018145.1 hypothetical protein -
PVA85_RS20735 (PVA85_20730) 4187933..4188313 - 381 WP_001103837.1 hypothetical protein -
PVA85_RS20740 (PVA85_20735) 4188409..4188711 - 303 WP_001020123.1 hypothetical protein -
PVA85_RS20745 (PVA85_20740) 4189435..4190355 - 921 WP_000907593.1 hypothetical protein ; Integrase Integrase
PVA85_RS20750 (PVA85_20745) 4191621..4192163 + 543 WP_010989295.1 DUF1062 domain-containing protein -
PVA85_RS20755 (PVA85_20750) 4192374..4193015 - 642 WP_000502502.1 ParB N-terminal domain-containing protein -
PVA85_RS20760 (PVA85_20755) 4193000..4194247 - 1248 WP_001283066.1 phosphoadenosine phosphosulfate reductase -
PVA85_RS20765 (PVA85_20760) 4194535..4194894 + 360 WP_010989293.1 hypothetical protein -
PVA85_RS20770 (PVA85_20765) 4195118..4195507 + 390 WP_000993574.1 hypothetical protein -
PVA85_RS20775 (PVA85_20770) 4195543..4197048 - 1506 WP_000213770.1 conjugal transfer protein TraG N-terminal domain-containing protein -
PVA85_RS20780 (PVA85_20775) 4197381..4198778 - 1398 WP_014341560.1 integrating conjugative element protein -
PVA85_RS20785 (PVA85_20780) 4198826..4199794 - 969 WP_000838927.1 TIGR03756 family integrating conjugative element protein -
PVA85_RS20790 (PVA85_20785) 4199791..4200183 - 393 WP_000821941.1 TIGR03757 family integrating conjugative element protein -
PVA85_RS20795 (PVA85_20790) 4200338..4200724 - 387 WP_000054770.1 hypothetical protein -
PVA85_RS20800 (PVA85_20795) 4200879..4203595 - 2717 Protein_4077 conjugative transfer ATPase -
PVA85_RS20805 (PVA85_20800) 4203715..4204164 - 450 WP_000244536.1 TIGR03751 family conjugal transfer lipoprotein -
PVA85_RS20810 (PVA85_20805) 4204151..4205629 - 1479 WP_001165842.1 TIGR03752 family integrating conjugative element protein -
PVA85_RS20815 (PVA85_20810) 4205619..4206518 - 900 WP_001240640.1 TIGR03749 family integrating conjugative element protein -
PVA85_RS20820 (PVA85_20815) 4206518..4207171 - 654 WP_000086082.1 TIGR03746 family integrating conjugative element protein -
PVA85_RS20825 (PVA85_20820) 4207168..4207542 - 375 WP_000848326.1 TIGR03750 family conjugal transfer protein -
PVA85_RS20830 (PVA85_20825) 4207552..4207917 - 366 WP_223228898.1 TIGR03745 family integrating conjugative element membrane protein -
PVA85_RS20835 (PVA85_20830) 4207944..4208177 - 234 WP_015899494.1 TIGR03758 family integrating conjugative element protein -
PVA85_RS20840 (PVA85_20835) 4208183..4208437 - 255 WP_000252871.1 RAQPRD family integrative conjugative element protein -
PVA85_RS20845 (PVA85_20840) 4208674..4209432 - 759 WP_010989289.1 TIGR03747 family integrating conjugative element membrane protein -
PVA85_RS20850 (PVA85_20845) 4209429..4211519 - 2091 WP_000071290.1 type IV conjugative transfer system coupling protein TraD -
PVA85_RS20855 (PVA85_20850) 4211539..4212108 - 570 WP_000626967.1 restriction endonuclease -
PVA85_RS20860 (PVA85_20855) 4212118..4212618 - 501 WP_000253629.1 integrating conjugative element protein -
PVA85_RS20865 (PVA85_20860) 4212654..4213340 - 687 WP_000013624.1 hypothetical protein VF
PVA85_RS20870 (PVA85_20865) 4213319..4214005 - 687 WP_223229647.1 TIGR03759 family integrating conjugative element protein -
PVA85_RS20875 (PVA85_20870) 4214078..4214992 - 915 WP_000214158.1 hypothetical protein -
PVA85_RS20880 (PVA85_20875) 4214949..4215311 - 363 WP_001149494.1 hypothetical protein -
PVA85_RS20885 (PVA85_20880) 4215499..4216374 - 876 WP_000994659.1 hypothetical protein -
PVA85_RS20890 (PVA85_20885) 4216586..4217053 - 468 WP_000455463.1 hypothetical protein -
PVA85_RS20895 (PVA85_20890) 4217150..4218301 - 1152 WP_000089603.1 Tyrosine recombinase XerC ; Integrase Integrase
PVA85_RS20900 (PVA85_20895) 4218649..4219956 - 1308 WP_000744276.1 hypothetical protein VF
PVA85_RS20905 (PVA85_20900) 4219953..4220615 - 663 WP_000218700.1 hypothetical protein VF
PVA85_RS20910 (PVA85_20905) 4220612..4221055 - 444 WP_223228896.1 hypothetical protein VF
PVA85_RS20915 (PVA85_20910) 4221098..4221694 - 597 WP_024131234.1 hypothetical protein VF
PVA85_RS20920 (PVA85_20915) 4221733..4222818 - 1086 WP_000074784.1 hypothetical protein VF
PVA85_RS20925 (PVA85_20920) 4222815..4224530 - 1716 WP_001289222.1 hypothetical protein VF
PVA85_RS20930 (PVA85_20925) 4224540..4224920 - 381 WP_014341558.1 hypothetical protein VF
PVA85_RS20935 (PVA85_20930) 4225108..4226394 - 1287 WP_000763621.1 hypothetical protein VF
PVA85_RS20940 (PVA85_20935) 4226396..4226734 - 339 WP_048657783.1 Outer membrane lipoprotein BfpB VF
PVA85_RS20945 (PVA85_20940) 4226700..4227584 - 885 WP_234828522.1 hypothetical protein VF
PVA85_RS20950 (PVA85_20945) 4228106..4228525 - 420 WP_000539682.1 hypothetical protein VF
PVA85_RS20955 (PVA85_20950) 4228528..4229772 - 1245 WP_001095932.1 hypothetical protein VF
PVA85_RS20960 (PVA85_20955) 4229937..4230887 - 951 Protein_4109 ISNCY family transposase ISPlu22 VF
PVA85_RS20965 (PVA85_20960) 4230953..4231489 - 537 WP_000157067.1 single-stranded DNA-binding protein -
PVA85_RS20970 (PVA85_20965) 4231502..4231720 - 219 WP_000958171.1 hypothetical protein -
PVA85_RS20975 (PVA85_20970) 4231801..4232250 - 450 WP_000032521.1 STY4534 family ICE replication protein -
PVA85_RS20980 (PVA85_20975) 4232918..4234912 - 1995 WP_001241572.1 DNA topoisomerase III -
PVA85_RS20985 (PVA85_20980) 4235023..4235799 - 777 WP_001290445.1 TIGR03761 family integrating conjugative element protein -
PVA85_RS20990 (PVA85_20985) 4236388..4237698 - 1311 WP_001194350.1 STY4528 family pathogenicity island replication protein -
PVA85_RS20995 (PVA85_20990) 4237728..4237976 - 249 WP_000377625.1 hypothetical protein -
PVA85_RS21000 (PVA85_20995) 4237976..4238533 - 558 WP_000144322.1 DUF2857 domain-containing protein -
PVA85_RS21005 (PVA85_21000) 4238618..4239340 - 723 WP_001275616.1 DUF2786 domain-containing protein -
PVA85_RS21010 (PVA85_21005) 4239327..4239587 - 261 WP_000838568.1 hypothetical protein -
PVA85_RS21015 (PVA85_21010) 4239801..4241600 - 1800 WP_001029724.1 ParB family protein -
PVA85_RS21020 (PVA85_21015) 4241593..4242957 - 1365 WP_000018529.1 SPI-7-type island replicative DNA helicase -
PVA85_RS21025 (PVA85_21020) 4242954..4243988 - 1035 WP_001195363.1 hypothetical protein VF
PVA85_RS21030 (PVA85_21030) 4244656..4244733 + 78 Protein_4123 porin family protein -
PVA85_RS21035 (PVA85_21035) 4244833..4245585 + 753 WP_001785756.1 non-specific acid phosphatase -
PVA85_RS21040 (PVA85_21040) 4245826..4246317 - 492 WP_000626103.1 GNAT family N-acetyltransferase -
PVA85_RS21045 (PVA85_21045) 4246314..4246607 - 294 WP_001110456.1 DUF1778 domain-containing protein -
PVA85_RS21050 (PVA85_21050) 4246924..4247146 + 223 Protein_4127 hypothetical protein -
PVA85_RS21055 (PVA85_21055) 4247412..4248287 + 876 WP_000921674.1 AraC family transcriptional regulator -
PVA85_RS21060 (PVA85_21060) 4248284..4248571 + 288 WP_001269916.1 transcriptional regulator RtsB -
PVA85_RS21065 (PVA85_21065) 4248594..4248810 + 217 Protein_4130 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance