MGE detailed information
MGE type: Prophage MGE length: 45556 bp
Accession: NZ_CP120398 Location: 2750236..2795791 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 424-2019_CI Replicon: chromosome
Accession: NZ_CP120398 Location: 2750236..2795791 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 424-2019_CI Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PVA85_RS13765 (PVA85_13765) | 2745674..2747046 | + | 1373 | Protein_2697 | MFS transporter | - |
| PVA85_RS13770 (PVA85_13770) | 2747094..2747975 | - | 882 | WP_000984498.1 | protease HtpX | - |
| PVA85_RS13775 (PVA85_13775) | 2748168..2750216 | - | 2049 | WP_001091235.1 | carboxy terminal-processing peptidase | - |
| PVA85_RS13780 (PVA85_13780) | 2750236..2750922 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| PVA85_RS13785 (PVA85_13785) | 2751020..2751517 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| PVA85_RS13790 (PVA85_13790) | 2751646..2752929 | + | 1284 | WP_001207300.1 | membrane integrity lipid transport subunit YebS | - |
| PVA85_RS13795 (PVA85_13795) | 2752898..2755531 | + | 2634 | WP_001521100.1 | Intermembrane transport protein YebT | VF |
| PVA85_RS13800 (PVA85_13800) | 2755609..2757048 | + | 1440 | WP_031624927.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PVA85_RS13805 (PVA85_13805) | 2757166..2757402 | + | 237 | WP_024131167.1 | YebV family protein | - |
| PVA85_RS13810 (PVA85_13810) | 2757513..2757704 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| PVA85_RS13815 (PVA85_13815) | 2757723..2758373 | - | 651 | WP_000986169.1 | protein-serine/threonine phosphatase | - |
| PVA85_RS13820 (PVA85_13820) | 2758597..2758761 | - | 165 | WP_001134857.1 | hypothetical protein | - |
| PVA85_RS13825 (PVA85_13825) | 2759046..2759767 | - | 722 | Protein_2709 | Guanine nucleotide exchange factor sopE2 | VF |
| PVA85_RS13830 (PVA85_13830) | 2760451..2760846 | + | 396 | WP_000422884.1 | DUF1398 domain-containing protein | - |
| PVA85_RS13835 (PVA85_13835) | 2761175..2761651 | + | 477 | WP_000030950.1 | hypothetical protein | - |
| PVA85_RS13840 (PVA85_13840) | 2762039..2762458 | - | 420 | WP_000354403.1 | GNAT family N-acetyltransferase | - |
| PVA85_RS13845 (PVA85_13845) | 2762829..2763095 | + | 267 | WP_010989185.1 | hypothetical protein | - |
| PVA85_RS13850 (PVA85_13850) | 2763264..2763404 | + | 141 | WP_031624337.1 | hypothetical protein | - |
| PVA85_RS13855 (PVA85_13855) | 2763380..2764650 | - | 1271 | Protein_2715 | IS256 family transposase ISEc39 | Transposase |
| PVA85_RS13860 (PVA85_13860) | 2764720..2765141 | + | 422 | Protein_2716 | tyrosine-type recombinase/integrase | - |
| PVA85_RS13865 (PVA85_13865) | 2766440..2767354 | + | 915 | WP_001233444.1 | DMT family transporter | - |
| PVA85_RS13870 (PVA85_13870) | 2767487..2767645 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PVA85_RS13875 (PVA85_13875) | 2767655..2768269 | + | 615 | WP_000848063.1 | disulfide bond formation protein B | - |
| PVA85_RS13880 (PVA85_13880) | 2768678..2770657 | - | 1980 | WP_001237518.1 | alkyl sulfatase dimerization domain-containing protein | - |
| PVA85_RS13885 (PVA85_13885) | 2771053..2772183 | + | 1131 | WP_000529513.1 | GGDEF domain-containing protein | - |
| PVA85_RS13890 (PVA85_13890) | 2772469..2772864 | - | 396 | Protein_2722 | DUF977 family protein | - |
| PVA85_RS13895 (PVA85_13895) | 2772877..2772987 | - | 111 | Protein_2723 | replication protein | - |
| PVA85_RS13900 (PVA85_13900) | 2772988..2773349 | + | 362 | Protein_2724 | recombinase RecT | - |
| PVA85_RS13905 (PVA85_13905) | 2773348..2773656 | + | 309 | Protein_2725 | hypothetical protein ; Integrase | Integrase |
| - | 2773775..2773918 | + | 144 | - | - | Antitoxin Detail |
| - | 2773777..2773879 | - | 103 | - | - | Toxin Detail |
| PVA85_RS13910 (PVA85_13910) | 2774020..2774373 | - | 354 | WP_000722366.1 | YebY family protein | - |
| PVA85_RS13915 (PVA85_13915) | 2774390..2775265 | - | 876 | WP_000979693.1 | copper homeostasis membrane protein CopD | - |
| PVA85_RS13920 (PVA85_13920) | 2775266..2775640 | - | 375 | WP_001681742.1 | CopC domain-containing protein YobA | - |
| PVA85_RS13925 (PVA85_13925) | 2775778..2776008 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PVA85_RS13930 (PVA85_13930) | 2776116..2776772 | + | 657 | WP_000100250.1 | carbon-nitrogen hydrolase family protein | - |
| PVA85_RS13935 (PVA85_13935) | 2776796..2777494 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| PVA85_RS13940 (PVA85_13940) | 2777531..2779582 | - | 2052 | WP_000936997.1 | oligopeptidase B | - |
| PVA85_RS13945 (PVA85_13945) | 2779796..2780455 | - | 660 | WP_000024713.1 | tellurite resistance TerB family protein | - |
| PVA85_RS13950 (PVA85_13950) | 2780549..2780902 | - | 354 | WP_001042123.1 | protein YebF | - |
| PVA85_RS13955 (PVA85_13955) | 2780970..2781260 | - | 291 | WP_000257728.1 | DNA damage-inducible protein YebG | - |
| PVA85_RS13960 (PVA85_13960) | 2781391..2782569 | + | 1179 | WP_000173426.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PVA85_RS13965 (PVA85_13965) | 2782669..2783310 | - | 642 | WP_000800493.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PVA85_RS13970 (PVA85_13970) | 2783348..2785159 | - | 1812 | WP_001069124.1 | phosphogluconate dehydratase | - |
| PVA85_RS13975 (PVA85_13975) | 2785394..2786869 | - | 1476 | WP_000301712.1 | glucose-6-phosphate dehydrogenase | - |
| PVA85_RS13980 (PVA85_13980) | 2787211..2788080 | + | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| PVA85_RS13985 (PVA85_13985) | 2788204..2789646 | + | 1443 | WP_031624930.1 | pyruvate kinase | - |
| PVA85_RS13990 (PVA85_13990) | 2789719..2790690 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| PVA85_RS13995 (PVA85_13995) | 2790807..2792126 | - | 1320 | WP_001184019.1 | murein DD-endopeptidase MepM | - |
| PVA85_RS14000 (PVA85_14000) | 2792142..2793086 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| PVA85_RS14005 (PVA85_14005) | 2793165..2793920 | + | 756 | WP_000203015.1 | Zinc import ATP-binding protein ZnuC | VF |
| PVA85_RS14010 (PVA85_14010) | 2793917..2794702 | + | 786 | WP_000571518.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| PVA85_RS14015 (PVA85_14015) | 2794781..2795791 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| PVA85_RS14020 (PVA85_14020) | 2795800..2796411 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| PVA85_RS14025 (PVA85_14025) | 2796771..2797463 | - | 693 | WP_000227314.1 | hypothetical protein | - |
| PVA85_RS14030 (PVA85_14030) | 2797673..2798272 | + | 600 | WP_000716741.1 | YebB family permuted papain-like enzyme | - |
| PVA85_RS14035 (PVA85_14035) | 2798274..2798795 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| PVA85_RS14040 (PVA85_14040) | 2798832..2799572 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| PVA85_RS14045 (PVA85_14045) | 2799602..2800054 | - | 453 | WP_000653696.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|